Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0413700-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:14711653:14716550:1 gene:Os09g0413700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0413700-01);Similar to predicted protein. (Os09t0413700-02)
Sequence	ATGCGCCCCACCGCCGCGGCCGCCACCGCCGCCTTCGCCTCACCGGTCGTCGCGGTTCCC AGTCGCGCGGCCCCGCTCGCCGCCCGCCGCCGCCTCCGCCGCGCGAGGCGCTTCGCTGTC CGCTCCGTCGCCTCCCCTCCAACGGTCCCCAAGCCCGCGGCTCCCCCCTCCAAGACTGGG AAATGGCAGTGGACATTTGAGGATAAGCCAATAAACATTTACTATGAGGAACATGAGCAT GAGACTGCTGAGAACGTGAAGAACATTCTTATGATTCCTACAATTTCTGATGTTAGCACA GTGGAGGAATGGAGGGTGGTAGCCAAAGATATTGTGGCACGAAAAGGAGAATTAGGTTAC CGTGCTACAATTGTTGATTGGCCTGGTCTGGGTTATTCAGACAGGCCATCACTGAACTAC AATGCTGATGTGATGGAGAATTTTCTGGTTCAGTTAATTAATTCACCAAATAGTCCTGTG GCAAATACAGATGGTGAAGTGGTAGTAGTTGGAGGAGGTCATGCAGCAACAATTGCAGTC CGTGCGGCTGGGAAGGGCCTTATAAGGCCATCTGGCATTGCTGCAGTTGCACCTACTTGG GCTGGACCCCTTCCCATTGTATTTGGCCGAGGTTCTGATATGGAGACAAGGTATGGGCTT CTACGAGGGACCCTCAGGGCCCCGGCTATTGGCTGGATGATGTACAATGTTCTGGTGAGC AACGAGAAGTCCATCCAGTCCCAGTACAAGTCTCACGTTTATGCCAACCCTGAGAACGTG ACTCCAAATATCGTGGAAAGTCGCTACGAGTTAACCAAAAGGAAAGGTGCACGGTTTGTC CCGGCTGCATTCTTGACAGGCCTTCTTGACCCTGTCCAAACAAGGGAAGAATTCCTTCAG CTGTTTGCCAAGTTGGACGCTCTCAGAGGCGCCAAAGGCGTGACAAAATTCGTGGAGGTT CCAGGTGCCCTTCTGCCGCAGGAGGAATTCCCATCACCAGTCGCGGAGGAACTCTACAGC TTTCTGAAGGAATCATTCTCGTCAGGTAGATGA

Peptide Sequence

PEP ID	Os09t0413700-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:14711653:14716550:1 gene:Os09g0413700 transcript:Os09t0413700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0413700-01);Similar to predicted protein. (Os09t0413700-02)
Sequence	MRPTAAAATAAFASPVVAVPSRAAPLAARRRLRRARRFAVRSVASPPTVPKPAAPPSKTG KWQWTFEDKPINIYYEEHEHETAENVKNILMIPTISDVSTVEEWRVVAKDIVARKGELGY RATIVDWPGLGYSDRPSLNYNADVMENFLVQLINSPNSPVANTDGEVVVVGGGHAATIAV RAAGKGLIRPSGIAAVAPTWAGPLPIVFGRGSDMETRYGLLRGTLRAPAIGWMMYNVLVS NEKSIQSQYKSHVYANPENVTPNIVESRYELTKRKGARFVPAAFLTGLLDPVQTREEFLQ LFAKLDALRGAKGVTKFVEVPGALLPQEEFPSPVAEELYSFLKESFSSGR

Transcript Sequence

Transcript ID	Os09t0413700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:14711653:14716550:1 gene:Os09g0413700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0413700-01);Similar to predicted protein. (Os09t0413700-02)
Sequence	ACTCCTTCCTCACCAACCATGCGCCCCACCGCCGCGGCCGCCACCGCCGCCTTCGCCTCA CCGGTCGTCGCGGTTCCCAGTCGCGCGGCCCCGCTCGCCGCCCGCCGCCGCCTCCGCCGC GCGAGGCGCTTCGCTGTCCGCTCCGTCGCCTCCCCTCCAACGGTCCCCAAGCCCGCGGCT CCCCCCTCCAAGACTGGGAAATGGCAGTGGACATTTGAGGATAAGCCAATAAACATTTAC TATGAGGAACATGAGCATGAGACTGCTGAGAACGTGAAGAACATTCTTATGATTCCTACA ATTTCTGATGTTAGCACAGTGGAGGAATGGAGGGTGGTAGCCAAAGATATTGTGGCACGA AAAGGAGAATTAGGTTACCGTGCTACAATTGTTGATTGGCCTGGTCTGGGTTATTCAGAC AGGCCATCACTGAACTACAATGCTGATGTGATGGAGAATTTTCTGGTTCAGTTAATTAAT TCACCAAATAGTCCTGTGGCAAATACAGATGGTGAAGTGGTAGTAGTTGGAGGAGGTCAT GCAGCAACAATTGCAGTCCGTGCGGCTGGGAAGGGCCTTATAAGGCCATCTGGCATTGCT GCAGTTGCACCTACTTGGGCTGGACCCCTTCCCATTGTATTTGGCCGAGGTTCTGATATG GAGACAAGGTATGGGCTTCTACGAGGGACCCTCAGGGCCCCGGCTATTGGCTGGATGATG TACAATGTTCTGGTGAGCAACGAGAAGTCCATCCAGTCCCAGTACAAGTCTCACGTTTAT GCCAACCCTGAGAACGTGACTCCAAATATCGTGGAAAGTCGCTACGAGTTAACCAAAAGG AAAGGTGCACGGTTTGTCCCGGCTGCATTCTTGACAGGCCTTCTTGACCCTGTCCAAACA AGGGAAGAATTCCTTCAGCTGTTTGCCAAGTTGGACGCTCTCAGAGGCGCCAAAGGCGTG ACAAAATTCGTGGAGGTTCCAGGTGCCCTTCTGCCGCAGGAGGAATTCCCATCACCAGTC GCGGAGGAACTCTACAGCTTTCTGAAGGAATCATTCTCGTCAGGTAGATGAATGTGCAGT TACGACAACTACGGCAGGGTCAAATTCAACAACATCCTATACTCATACTGTACTAGAGCT TGTAGTAACAGAAGCAGCAGCATCAATTCCTGTCTGGGTGCCACATTTCCAAGCTTGGCA AACCAACCACAATTCCATATATACAGAGAGTGTGTGC