Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0412900-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:14666247:14667786:1 gene:Os09g0412900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os09t0412900-01)
Sequence	ATGGCCGCTCTCCACCTCCACGCCCTCATCGCCGGCGGCGGCGGCGCCACCACCGTCCCC CATCTCCGGCAGATCCACGCCCATCTCCTCACCTCCGGCCGCTTCCCCTCCCTCGGCCCC GTCCTCCTCCGCCGCCTCATTTCGCTGCCCAATCCCCACCTCCACCTCGCCCACCGTCTC CTCCTCTCCCTCCCCTCCCCATCCCTCGACCTCTTCAACCTCCTCCTTCCCCCGCTCGCC TCCTCGCCGGACCCCTCCACCGCCGCCGCCCTCTTCCTTCGCCTCCGCCGCGGGGGTCTC CGCCCCGACGCGCACACGCTCCCGCACGTCCTCAAGGCGCTCGCGCGCCTCGCCCCGGGA TCCCTCCCCGTTGTCGGATCCGTGCACTCGGAGGCCGTCAAGGACGGCCTCGCCTCCGCG GTGGTGTACGTCCCGAACGCGCTCATGGCCGCGTACTCGGCCTGTGGGCAACTGGAGCGC GCCGTGCAGGTGTTCGACGAAATGCCGCGCCGGACCGTCGTGTCCTGGAACACCGCGCTC ACCGCCTGCGCGGGCAACGGCCGCCACGAGCTGTGCGTCGAGCTGTTCGCGGAGATGCTA GAGGCTGGTTCCGTGCCGGACCCGACCACGTTCGTGGTCATGCTGTCCGCCGCGGCCGAG CTGGGCAACCTGGCGCTCGGCAAGTGGGCGCATGGACAGGTTGTTTCCCGGAGGCTGGAC ATGACGCTTCAGCTTGGGACGGCGGCAGTGAACATGTACTCCAAGTGTGCCACGGTGAGT TATGCCCTGCGCTTGTTCGAGAGGATGCCCGCGAGGAATGTCTGGACATGGACTGCCATG ATCGTAGGGTTTGCGCAGAATGGTTTGGCTCAGGAAGCGCTGGAGCTGTTTGACAGGATG AAACTCTCAAAGATCATACCCAATTATGTCACATTTCTTGGTCTGCTTTGTGCATGTAGC CATGCTGGCCTGGTTGATGAGGGGCGCCGGTTCTTCCACGAAATGCAGCATGTTTATGGT ATTGTGCCGATGATGACGCACTACAGCGCCATGGTTGATGTCCTAGGCCGCAACGGTCTT CTCCAGGAAGCTTATGACTTTGTTGTAGGAATGCCAGTCGAGGCTGACCCAGTTGTGTGG AGGACATTATTGGCAGCCTGCCAGCTGCATAGCTCCAAGGACTGTATTGAGATCATTGAC AAGGTGCAGGGCAAACTGCTGGAGCTAGAGCCCCGGAGAAGCGGGAACTACGTCATGGTT TCAAACATCTACTGCGAAATTGGATCATGGGACGAGGCAGCGAAGGCAAGGAGGGTGATG AGGGAAGGAGGGATGAAGAAGGTTGCGGGAGAGAGTTGTGTTGAGGTGGGAGGACGGGTG CATCGGTTCATCTTCGGGGATGATTCTTGCCCTGAATTTCATGGGGCTTGTAGGATTCTC CATGAATTGAATCTCAACATGAGAAAATGTGAACCTATTGACCCAATCTTATTTACTGAT GATGCTGACTAG

Peptide Sequence

PEP ID	Os09t0412900-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:14666247:14667786:1 gene:Os09g0412900 transcript:Os09t0412900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os09t0412900-01)
Sequence	MAALHLHALIAGGGGATTVPHLRQIHAHLLTSGRFPSLGPVLLRRLISLPNPHLHLAHRL LLSLPSPSLDLFNLLLPPLASSPDPSTAAALFLRLRRGGLRPDAHTLPHVLKALARLAPG SLPVVGSVHSEAVKDGLASAVVYVPNALMAAYSACGQLERAVQVFDEMPRRTVVSWNTAL TACAGNGRHELCVELFAEMLEAGSVPDPTTFVVMLSAAAELGNLALGKWAHGQVVSRRLD MTLQLGTAAVNMYSKCATVSYALRLFERMPARNVWTWTAMIVGFAQNGLAQEALELFDRM KLSKIIPNYVTFLGLLCACSHAGLVDEGRRFFHEMQHVYGIVPMMTHYSAMVDVLGRNGL LQEAYDFVVGMPVEADPVVWRTLLAACQLHSSKDCIEIIDKVQGKLLELEPRRSGNYVMV SNIYCEIGSWDEAAKARRVMREGGMKKVAGESCVEVGGRVHRFIFGDDSCPEFHGACRIL HELNLNMRKCEPIDPILFTDDAD

Transcript Sequence

Transcript ID	Os09t0412900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:14666247:14667786:1 gene:Os09g0412900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os09t0412900-01)
Sequence	GCGCGCCGCCGCGCAACCTCCATGGAATGGCCGCTCTCCACCTCCACGCCCTCATCGCCG GCGGCGGCGGCGCCACCACCGTCCCCCATCTCCGGCAGATCCACGCCCATCTCCTCACCT CCGGCCGCTTCCCCTCCCTCGGCCCCGTCCTCCTCCGCCGCCTCATTTCGCTGCCCAATC CCCACCTCCACCTCGCCCACCGTCTCCTCCTCTCCCTCCCCTCCCCATCCCTCGACCTCT TCAACCTCCTCCTTCCCCCGCTCGCCTCCTCGCCGGACCCCTCCACCGCCGCCGCCCTCT TCCTTCGCCTCCGCCGCGGGGGTCTCCGCCCCGACGCGCACACGCTCCCGCACGTCCTCA AGGCGCTCGCGCGCCTCGCCCCGGGATCCCTCCCCGTTGTCGGATCCGTGCACTCGGAGG CCGTCAAGGACGGCCTCGCCTCCGCGGTGGTGTACGTCCCGAACGCGCTCATGGCCGCGT ACTCGGCCTGTGGGCAACTGGAGCGCGCCGTGCAGGTGTTCGACGAAATGCCGCGCCGGA CCGTCGTGTCCTGGAACACCGCGCTCACCGCCTGCGCGGGCAACGGCCGCCACGAGCTGT GCGTCGAGCTGTTCGCGGAGATGCTAGAGGCTGGTTCCGTGCCGGACCCGACCACGTTCG TGGTCATGCTGTCCGCCGCGGCCGAGCTGGGCAACCTGGCGCTCGGCAAGTGGGCGCATG GACAGGTTGTTTCCCGGAGGCTGGACATGACGCTTCAGCTTGGGACGGCGGCAGTGAACA TGTACTCCAAGTGTGCCACGGTGAGTTATGCCCTGCGCTTGTTCGAGAGGATGCCCGCGA GGAATGTCTGGACATGGACTGCCATGATCGTAGGGTTTGCGCAGAATGGTTTGGCTCAGG AAGCGCTGGAGCTGTTTGACAGGATGAAACTCTCAAAGATCATACCCAATTATGTCACAT TTCTTGGTCTGCTTTGTGCATGTAGCCATGCTGGCCTGGTTGATGAGGGGCGCCGGTTCT TCCACGAAATGCAGCATGTTTATGGTATTGTGCCGATGATGACGCACTACAGCGCCATGG TTGATGTCCTAGGCCGCAACGGTCTTCTCCAGGAAGCTTATGACTTTGTTGTAGGAATGC CAGTCGAGGCTGACCCAGTTGTGTGGAGGACATTATTGGCAGCCTGCCAGCTGCATAGCT CCAAGGACTGTATTGAGATCATTGACAAGGTGCAGGGCAAACTGCTGGAGCTAGAGCCCC GGAGAAGCGGGAACTACGTCATGGTTTCAAACATCTACTGCGAAATTGGATCATGGGACG AGGCAGCGAAGGCAAGGAGGGTGATGAGGGAAGGAGGGATGAAGAAGGTTGCGGGAGAGA GTTGTGTTGAGGTGGGAGGACGGGTGCATCGGTTCATCTTCGGGGATGATTCTTGCCCTG AATTTCATGGGGCTTGTAGGATTCTCCATGAATTGAATCTCAACATGAGAAAATGTGAAC CTATTGACCCAATCTTATTTACTGATGATGCTGACTAGCT