Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0412200-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:14629693:14632859:-1 gene:Os09g0412200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF246, plant family protein. (Os09t0412200-01)
Sequence	ATGCGGAGGCCGTCGCCTTCGCCGCCGGCGGCGAGGGGCCCGGCGCTCGCCGCTGCGGCG GCCGTCGTCGTGCTACTTCCGTCCATCTTCCCCGCGATCTTCACCCCGCTTGGCCGCGCC TTCCCTTCCCTCTTCTCGGAGTGGAATGCCCCTAAGCCAATGCATGAGTCTCTTCTGAAT GAGGCTTTGCGGCGAACAATTTCAAACGAACAAAAGAGAGAGCTGTGGTCACCATTGCCG TACCAAGGTTGGAAACCATGCTTGAAGTCATCAAGTGTTCACGGGGTACCTTTGGAACCC ACTGGATATATCCAAGTATTTCTTGATGGTGGACTGAATCAGCAAAGAATGGGGATATGT GATGCGGTTGCTGTTGCTAAAATTCTGAATGCGTCTCTTGTGATCCCACATCTTGAAGTA AATCCTGTTTGGAAAGACACAAGCTCCTTTGAAGAAATTTTTGATGTGGATCATTTTATC AACACCTTAAAAGCTGAAGTTTCAATAGTCAAAGTTCTCCCAAAAAAATTTTCCTGGAGC ACAAGAGAGTACTATGGTACAGGCATCCGTGCTACAAGAATAAAAACCGCACCTGTTCAT GCCTCTGCAAGTTGGTATCTGGAGAATGTCAGTCCTATCCTTCAAAGCTATGGCATTGCT GCCATTGCCCCCTTTTCTCACCGTCTTGCATTTGATGACTTGCCTGTGGACATTCAGCAT CTGCGTTGCAAAGTTAACTTCCAAGCTCTTGTTTTCCTGCCTCACATTATCTCACTGGGG GAGACTCTTGTGAAACGCTTGAGATCTCCCGTCCAGGGCCAATCTGGTGAACTTATCCAA GAAGTTGGAGAAGACACAAACCAAGCCGGAAAATATGCAGTTTTGCATCTCCGTTTTGAT AAGGATATGGCTGCACATTCTGCTTGTGACTTCGGTGGTGGCAGAGCTGAGAGATTAGCT CTGGCTAAGTACAGACAAGTCATCTGGCAAGGGAGGGTATTAAATTCACAGCTAACTGAT GAGGAGCTTCGGAACTTGGGACGCTGCCCATTGACTCCAGAAGAAATTGGGCTGTTACTG GCAGCTCTTGGATTTGACAGCAGAACTCGAATCTATCTAGCCTCTCACAAGGTATACGGC GGGGAAGCCAGAATTTCTAGCCTGCGCAAACTTTTCCCCCTAATGGAGGACAAGAGGAGC CTTGCGTCGGAAGAGGAGCTGACTAATGTTGAAGGCAAGGCTTCTGTTCTAGCAGCTCTT GACTACTATATCAGCATGCACAGCGACATTTTCATCTCTGCATCTCCTGGGAATATGCAC AACGCACTGATGGCTCACCGTACCTTTGAGAATATGAAGACCATAAGGCCAAACATGGCA TTGCTTGGGCGCATCTTTGTTAACAAGAGCATGGAGTGGTTGGAATTTCAGGAGGCTGTA CAAGCAGGGCACAAGGGTAGATACGGGCAAATCAGACTGAGGAAACCAAAGCAATCTATT TATACTTACCCTGCTCCAGACTGTATGTGTCAAGGGTAG

Peptide Sequence

PEP ID	Os09t0412200-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:14629693:14632859:-1 gene:Os09g0412200 transcript:Os09t0412200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF246, plant family protein. (Os09t0412200-01)
Sequence	MRRPSPSPPAARGPALAAAAAVVVLLPSIFPAIFTPLGRAFPSLFSEWNAPKPMHESLLN EALRRTISNEQKRELWSPLPYQGWKPCLKSSSVHGVPLEPTGYIQVFLDGGLNQQRMGIC DAVAVAKILNASLVIPHLEVNPVWKDTSSFEEIFDVDHFINTLKAEVSIVKVLPKKFSWS TREYYGTGIRATRIKTAPVHASASWYLENVSPILQSYGIAAIAPFSHRLAFDDLPVDIQH LRCKVNFQALVFLPHIISLGETLVKRLRSPVQGQSGELIQEVGEDTNQAGKYAVLHLRFD KDMAAHSACDFGGGRAERLALAKYRQVIWQGRVLNSQLTDEELRNLGRCPLTPEEIGLLL AALGFDSRTRIYLASHKVYGGEARISSLRKLFPLMEDKRSLASEEELTNVEGKASVLAAL DYYISMHSDIFISASPGNMHNALMAHRTFENMKTIRPNMALLGRIFVNKSMEWLEFQEAV QAGHKGRYGQIRLRKPKQSIYTYPAPDCMCQG

Transcript Sequence

Transcript ID	Os09t0412200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:14629693:14632859:-1 gene:Os09g0412200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF246, plant family protein. (Os09t0412200-01)
Sequence	GGGCTCGTCGTCGTCGTCGTCTCCCCTCCCCCCACCTGACTTGAGACGGGGAGATGCGGA GGCCGTCGCCTTCGCCGCCGGCGGCGAGGGGCCCGGCGCTCGCCGCTGCGGCGGCCGTCG TCGTGCTACTTCCGTCCATCTTCCCCGCGATCTTCACCCCGCTTGGCCGCGCCTTCCCTT CCCTCTTCTCGGAGTGGAATGCCCCTAAGCCAATGCATGAGTCTCTTCTGAATGAGGCTT TGCGGCGAACAATTTCAAACGAACAAAAGAGAGAGCTGTGGTCACCATTGCCGTACCAAG GTTGGAAACCATGCTTGAAGTCATCAAGTGTTCACGGGGTACCTTTGGAACCCACTGGAT ATATCCAAGTATTTCTTGATGGTGGACTGAATCAGCAAAGAATGGGGATATGTGATGCGG TTGCTGTTGCTAAAATTCTGAATGCGTCTCTTGTGATCCCACATCTTGAAGTAAATCCTG TTTGGAAAGACACAAGCTCCTTTGAAGAAATTTTTGATGTGGATCATTTTATCAACACCT TAAAAGCTGAAGTTTCAATAGTCAAAGTTCTCCCAAAAAAATTTTCCTGGAGCACAAGAG AGTACTATGGTACAGGCATCCGTGCTACAAGAATAAAAACCGCACCTGTTCATGCCTCTG CAAGTTGGTATCTGGAGAATGTCAGTCCTATCCTTCAAAGCTATGGCATTGCTGCCATTG CCCCCTTTTCTCACCGTCTTGCATTTGATGACTTGCCTGTGGACATTCAGCATCTGCGTT GCAAAGTTAACTTCCAAGCTCTTGTTTTCCTGCCTCACATTATCTCACTGGGGGAGACTC TTGTGAAACGCTTGAGATCTCCCGTCCAGGGCCAATCTGGTGAACTTATCCAAGAAGTTG GAGAAGACACAAACCAAGCCGGAAAATATGCAGTTTTGCATCTCCGTTTTGATAAGGATA TGGCTGCACATTCTGCTTGTGACTTCGGTGGTGGCAGAGCTGAGAGATTAGCTCTGGCTA AGTACAGACAAGTCATCTGGCAAGGGAGGGTATTAAATTCACAGCTAACTGATGAGGAGC TTCGGAACTTGGGACGCTGCCCATTGACTCCAGAAGAAATTGGGCTGTTACTGGCAGCTC TTGGATTTGACAGCAGAACTCGAATCTATCTAGCCTCTCACAAGGTATACGGCGGGGAAG CCAGAATTTCTAGCCTGCGCAAACTTTTCCCCCTAATGGAGGACAAGAGGAGCCTTGCGT CGGAAGAGGAGCTGACTAATGTTGAAGGCAAGGCTTCTGTTCTAGCAGCTCTTGACTACT ATATCAGCATGCACAGCGACATTTTCATCTCTGCATCTCCTGGGAATATGCACAACGCAC TGATGGCTCACCGTACCTTTGAGAATATGAAGACCATAAGGCCAAACATGGCATTGCTTG GGCGCATCTTTGTTAACAAGAGCATGGAGTGGTTGGAATTTCAGGAGGCTGTACAAGCAG GGCACAAGGGTAGATACGGGCAAATCAGACTGAGGAAACCAAAGCAATCTATTTATACTT ACCCTGCTCCAGACTGTATGTGTCAAGGGTAGACTGCTAAATTTTGCAACAAAAGACTAG ATTCTTTAGTGTGTGAAGCTGAAGGATTTTTGCTCGGCGACCAGTGAATGTTACAATGAG GTTCTAATTGTTGTCAGTTTCTTAGGACGACAAGGTTCTTTGGATATAGGGTTGGGAAGA AGTTTTGGTTGACCCAAGCATTCAGCTGACTTAATTTTTACCCTAGAAAAAAAATTCAGT CTCGTTCCACATTCAGTGTAAAGGTTGTAGTTTCGTGAGTGATGTAGACTTGGCATATTG TATCTTTTTGTCCTTTCCGTACTACATTCTGTGCATATGTAAGTAAACATGGATCTTTCG GCCGTGAACTTGTAAGCACACATGTTGAGTTTCCACC