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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0411700-03
CDS Infomation

cds chromosome:IRGSP-1.0:9:14610923:14613200:-1 gene:Os09g0411700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-prolyl cis-trans isomerase, PpiC-type domain containing protein. (Os09t0411700-01);Peptidyl-prolyl cis-trans isomerase, PpiC-type domain containing protein. (Os09t0411700-02);Peptidyl-prolyl cis-trans isomerase, PpiC-type domain containing protein. (Os09t0411700-03)
Sequence

ATGGGGAAGGACTCCAAGCCGAAGGACAAGGGGAAGGGCAAGCAGGCTGCCGGCTCGTCC
GGCGGCGATGACGCCGGCGGCGGCGGCAAGGGAGGCAAGGGCAAGGGCGGCAAGTCCGCC
GACGGCCTCGGCACCTGCACCTACGTCAAAGCTAGGCACGTACTGTGCGAGAAGCAAGGG
AAGATCAATGAAGCTTACAAGAAGTTGCAGGATGGCTGGTTGGACAACGGGGACAAGGTC
CCTCCTGCCGAGTTTGCAAAGATAGCCCAAGAATACTCTGAATGTCCATCTGGAAAGAAA
GGTGGAGATCTTGGATGGTTCCCGCGTGGAAAAATGGCTGGCCCTTTTCAGGATGTTGCA
TTTAGCACACCTGTGGGAGCTACTAGCGCACCATTTAAGTCAACGCATGGGTACCACTTC
ATCCTCTGTGAAGGAAGGAAGAACTGA

Peptide Sequence

PEP ID

Os09t0411700-03
PEP Infomation

pep chromosome:IRGSP-1.0:9:14610923:14613200:-1 gene:Os09g0411700 transcript:Os09t0411700-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-prolyl cis-trans isomerase, PpiC-type domain containing protein. (Os09t0411700-01);Peptidyl-prolyl cis-trans isomerase, PpiC-type domain containing protein. (Os09t0411700-02);Peptidyl-prolyl cis-trans isomerase, PpiC-type domain containing protein. (Os09t0411700-03)
Sequence

MGKDSKPKDKGKGKQAAGSSGGDDAGGGGKGGKGKGGKSADGLGTCTYVKARHVLCEKQG
KINEAYKKLQDGWLDNGDKVPPAEFAKIAQEYSECPSGKKGGDLGWFPRGKMAGPFQDVA
FSTPVGATSAPFKSTHGYHFILCEGRKN

Transcript Sequence

Transcript ID

Os09t0411700-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:14610923:14613200:-1 gene:Os09g0411700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-prolyl cis-trans isomerase, PpiC-type domain containing protein. (Os09t0411700-01);Peptidyl-prolyl cis-trans isomerase, PpiC-type domain containing protein. (Os09t0411700-02);Peptidyl-prolyl cis-trans isomerase, PpiC-type domain containing protein. (Os09t0411700-03)
Sequence

TAGGGTTTTTGCTGCTCGAGCGGAGAGCAGATGGGGAAGGACTCCAAGCCGAAGGACAAG
GGGAAGGGCAAGCAGGCTGCCGGCTCGTCCGGCGGCGATGACGCCGGCGGCGGCGGCAAG
GGAGGCAAGGGCAAGGGCGGCAAGTCCGCCGACGGCCTCGGCACCTGCACCTACGTCAAA
GCTAGGCACGTACTGTGCGAGAAGCAAGGGAAGATCAATGAAGCTTACAAGAAGTTGCAG
GATGGCTGGTTGGACAACGGGGACAAGGTCCCTCCTGCCGAGTTTGCAAAGATAGCCCAA
GAATACTCTGAATGTCCATCTGGAAAGAAAGGTGGAGATCTTGGATGGTTCCCGCGTGGA
AAAATGGCTGGCCCTTTTCAGGATGTTGCATTTAGCACACCTGTGGGAGCTACTAGCGCA
CCATTTAAGTCAACGCATGGGTACCACTTCATCCTCTGTGAAGGAAGGAAGAACTGATCA
GTCTGCTTCAGGTTGGAACAGAAGCACCTCAGTCTATACAAGATGCAGATGCCTCGTGTC
TCTGTCAACTTAATAAGCACTGAATGACGGGCATCCATATTCTATGTTTAGCCTTTCTAA
TGCTCTCTGAAAGAGTCTTGAAAAACTGTGCTTTCTGTAAGTAACCTGTGGTGTCAAGCA
TGACATCTATTTGGGATATGCTGAGATTTAGCATTTGTCTGTGTCTCTTATCT