Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0411600-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:14603951:14607125:-1 gene:Os09g0411600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os09t0411600-01)
Sequence	ATGCCGCGCGACGGCGATGGCCATGGCCGCCGCCGTCCTCCTCCTCCTCCTCCTCCCGGC CACCCACCCAACCTGCCCCCTCACGTCCCCTACTCCCGCGCGCTGCAGCAGCGCCTCTAC CTCCTCGCCCAGCACCGCCGCCGCCGCATCCCCCCGGGCGACGGCGACGCCTCCGCCGCC CGCCGCGCGCTCGACCAGCTCCACGCGCAGGTGGTCCTCAACGGCTTCCCACGCAAGCGC TTCCTCCTCGCCAAGCTCCTCTCCCTCGCCGCCGCCGCCGCCGACCTCCCCCGCGCAGAG TCCCTCTTCCTCGCCGCCCCCGCGGCCGAGTGCTCCTCCTCCACCTCGTCGTCGACGCCC ACCCTGGCCAACCTCGTTCTCCGCGCCGCCGCGTCGTCCCGCGCGCCGCCGGACCGGCTG GTGGCACTCTTCTCGCGCCTCGTTTCCCGCCACGGGTTCCGCCCCAACGCCTTCTCCTTC TCCACGCTCCTCGCTGCCCTCGCGGACGCGGGCGCCGCGGCGCTCCCACACGGCCGCGCT CTCCACGCCCGCGCGCTAGCGTGCGGGCTAGTGCTGTCCAGTGGGCACGTGCTGACCAGC CTCCTTGATCTTTATGCGGCGGCTGGGCAACTGGGGGAGGCCCGGAGGGTGTTCGACGAA ATGCCTGGCAGGACCGTGGCAGCATGGAATTGCATGCTTGCGGCGTATGTTCGGTGCTGT GAGATGGACGCCGCATTGTGGTTCTTCAATGAGATGCCTGGGAGAGACTCTGTGGCGTGG ACAACGATGATTGCTGGTTGCGTGAATGCCGGGAAGGCAGCAGAGGCGGTTGAGCTGTTC TGGAGGATGAGGAAGGCAAATGCGAAGGTTGACGCTGTGACCATGGTTGCTTTGCTTACG GCCTGTGCCGAGCAGGGAGACCTGCGGCTCGGGCGGTGGGTGCATGCCCATGTCGAGCAG GAAGGACGACAGTGGCGGACTGTTTTGCTGGACAATGCACTCATCAATATGTATGTGAAG TGTGGGGCTGTGGAGGATGCGCACCGCTTATTCCTGGTGATGCCAAGGAGGAGTACCGTC TCATGGACGACTATGATCTCAGGGCTTGCGATCCATGGCCGCGCCGAGGAGGCACTAGAC TTGTTTCACAGAATGCAGGAGCGTCCTGATGGTGCTACTCTGCTTGCAGTGTTGTTGGCA TGCAGCAATGCAGGGAGGGTTGATGATGGACGACAATACTTTCAGAGTATGGAAAGATTT TACGGGATCACTCCAGGGATACAGCACTACGGCTGCATGGTTGACATGCTCTGCCACGGG AAGCAATTGCGTGAAGCAATTGAGTTTGTGGAGACAATGCATTTGCAGCCTAATGATGCT GTGTTGGGCGCACTACTTAGCGGATGCAAGAGGGAAGGCAATCTTGAGCTCGCAGCACAA GTGATTGAAAGGTTGATTAGGCTGCAGCCAGAGCGAGCAGCTGGGCACCTTGTCCTGCTG GCTAACATGTATGCTGGTGTTGGACAATGGGAGCAGGCTGGGAAGGTAAGAGAAAGAGTA GCTGCCCTGAATGCTGGAAAACCTGCAGGGACAAGCAGGGTGAATCCGAACCAATCCAGC ATGTTGGTACATAGCATGCTGGCATGA

Peptide Sequence

PEP ID	Os09t0411600-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:14603951:14607125:-1 gene:Os09g0411600 transcript:Os09t0411600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os09t0411600-01)
Sequence	MPRDGDGHGRRRPPPPPPPGHPPNLPPHVPYSRALQQRLYLLAQHRRRRIPPGDGDASAA RRALDQLHAQVVLNGFPRKRFLLAKLLSLAAAAADLPRAESLFLAAPAAECSSSTSSSTP TLANLVLRAAASSRAPPDRLVALFSRLVSRHGFRPNAFSFSTLLAALADAGAAALPHGRA LHARALACGLVLSSGHVLTSLLDLYAAAGQLGEARRVFDEMPGRTVAAWNCMLAAYVRCC EMDAALWFFNEMPGRDSVAWTTMIAGCVNAGKAAEAVELFWRMRKANAKVDAVTMVALLT ACAEQGDLRLGRWVHAHVEQEGRQWRTVLLDNALINMYVKCGAVEDAHRLFLVMPRRSTV SWTTMISGLAIHGRAEEALDLFHRMQERPDGATLLAVLLACSNAGRVDDGRQYFQSMERF YGITPGIQHYGCMVDMLCHGKQLREAIEFVETMHLQPNDAVLGALLSGCKREGNLELAAQ VIERLIRLQPERAAGHLVLLANMYAGVGQWEQAGKVRERVAALNAGKPAGTSRVNPNQSS MLVHSMLA

Transcript Sequence

Transcript ID	Os09t0411600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:14603951:14607125:-1 gene:Os09g0411600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os09t0411600-01)
Sequence	ATTCCCGCGCAGCGCGCAAGCCATGCCGCGCGACGGCGATGGCCATGGCCGCCGCCGTCC TCCTCCTCCTCCTCCTCCCGGCCACCCACCCAACCTGCCCCCTCACGTCCCCTACTCCCG CGCGCTGCAGCAGCGCCTCTACCTCCTCGCCCAGCACCGCCGCCGCCGCATCCCCCCGGG CGACGGCGACGCCTCCGCCGCCCGCCGCGCGCTCGACCAGCTCCACGCGCAGGTGGTCCT CAACGGCTTCCCACGCAAGCGCTTCCTCCTCGCCAAGCTCCTCTCCCTCGCCGCCGCCGC CGCCGACCTCCCCCGCGCAGAGTCCCTCTTCCTCGCCGCCCCCGCGGCCGAGTGCTCCTC CTCCACCTCGTCGTCGACGCCCACCCTGGCCAACCTCGTTCTCCGCGCCGCCGCGTCGTC CCGCGCGCCGCCGGACCGGCTGGTGGCACTCTTCTCGCGCCTCGTTTCCCGCCACGGGTT CCGCCCCAACGCCTTCTCCTTCTCCACGCTCCTCGCTGCCCTCGCGGACGCGGGCGCCGC GGCGCTCCCACACGGCCGCGCTCTCCACGCCCGCGCGCTAGCGTGCGGGCTAGTGCTGTC CAGTGGGCACGTGCTGACCAGCCTCCTTGATCTTTATGCGGCGGCTGGGCAACTGGGGGA GGCCCGGAGGGTGTTCGACGAAATGCCTGGCAGGACCGTGGCAGCATGGAATTGCATGCT TGCGGCGTATGTTCGGTGCTGTGAGATGGACGCCGCATTGTGGTTCTTCAATGAGATGCC TGGGAGAGACTCTGTGGCGTGGACAACGATGATTGCTGGTTGCGTGAATGCCGGGAAGGC AGCAGAGGCGGTTGAGCTGTTCTGGAGGATGAGGAAGGCAAATGCGAAGGTTGACGCTGT GACCATGGTTGCTTTGCTTACGGCCTGTGCCGAGCAGGGAGACCTGCGGCTCGGGCGGTG GGTGCATGCCCATGTCGAGCAGGAAGGACGACAGTGGCGGACTGTTTTGCTGGACAATGC ACTCATCAATATGTATGTGAAGTGTGGGGCTGTGGAGGATGCGCACCGCTTATTCCTGGT GATGCCAAGGAGGAGTACCGTCTCATGGACGACTATGATCTCAGGGCTTGCGATCCATGG CCGCGCCGAGGAGGCACTAGACTTGTTTCACAGAATGCAGGAGCGTCCTGATGGTGCTAC TCTGCTTGCAGTGTTGTTGGCATGCAGCAATGCAGGGAGGGTTGATGATGGACGACAATA CTTTCAGAGTATGGAAAGATTTTACGGGATCACTCCAGGGATACAGCACTACGGCTGCAT GGTTGACATGCTCTGCCACGGGAAGCAATTGCGTGAAGCAATTGAGTTTGTGGAGACAAT GCATTTGCAGCCTAATGATGCTGTGTTGGGCGCACTACTTAGCGGATGCAAGAGGGAAGG CAATCTTGAGCTCGCAGCACAAGTGATTGAAAGGTTGATTAGGCTGCAGCCAGAGCGAGC AGCTGGGCACCTTGTCCTGCTGGCTAACATGTATGCTGGTGTTGGACAATGGGAGCAGGC TGGGAAGGTAAGAGAAAGAGTAGCTGCCCTGAATGCTGGAAAACCTGCAGGGACAAGCAG GGTGAATCCGAACCAATCCAGCATGTTGGTACATAGCATGCTGGCATGAGCCCAATTGAT TCTGCAGTTTCGTTAACAAGACTTCGGAGGAATCTATGAGTAAGCATGGGAGCTTGAAGA GAAATGGCAAGCACAAAATTATTTGGTGTTCTCGTGAATGCCTTGGGAAAAAAAAAAAAG GTTGAGCTGGGGCAAAAGTATAGCATGCATTCCTGATCTTCTGGTGAAGCCATGAAATTA TGCAGTAGTGTTGCTTCTTTTCAGTTCCTCATATCACTCAAGAAGCTTGTTACATGTACC GATGCCAAGCGCAGCGGCGAGATGCCATGCAGCATGGATATAGGGAGTCTCTGGGAAGCA ATCATCAGCGATGAACAGCGCGCCTCCTAACAGAGACGACATCTTGTGCAGTGTGAACAA CTGAAACCATCAAAGGCTGAAATGGTAGGAGCAATGCTGATGCTGCCATTAGTAATCGCG GGTTCTCATTCCGAAGTGCTCTTGATAAACACTGCACAAAACACAGGCTTGTCACAATGG CATGATTTGCATCAGTCAGATAATGTAACAACAATTATCCATCAGGTCACGAAAACTTAC TACATCCGTCTCATAATATAAGGGATTTTGCTCGTACAACTACATGCATGGGCAAAATGC CTTATATTTGGGATAGAGGTAATATTGTTTTGGCATGCCTTAAGTCAAACATTTGAAACT TTAAACATGCATATCTCTTTATATATGTTTAGATTGGATCATAAAAAATGTATGTAGAGA TTCATTACGGAAAGCACTTTCATAATATTATGATAATTGTTTGTTGTAATAGATATATTG TTATAGAATATAGTGGTTAACATTGTATGTTCAAAACAACATTTTTTTGTGAACAGAGAG TACTAGAGT