Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0410700-00
CDS Infomation	cds chromosome:IRGSP-1.0:9:14583538:14586281:-1 gene:Os09g0410700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 039 description:Helix-loop-helix DNA-binding domain containing protein. (Os09t0410700-00)
Sequence	ATGTGGGAAGGCGGGAGCCACGACGCCGCGGCGCAGCTGCTGCCGTGGTTCGTCGGCGAG CCGGCAGCGGCGGCGGTGGGGGGATACGGAGGGTGTGTCGACGTGGTCGGGCAGGGCGGG GTGTTCGGGTTCGGTTTCGAGGCCGCGGCGGCGCCGGTGGTAACCAGGCAGCAGCGTGGT GGCGCGGCGGCGGCGGAGGGATCATCGAGAGGCGGTGGCGGTAAGCCGGCGGTGGTGTCC GGGCTGCTCGGCAGCCTGCAGGCGGAGCTGGGGCGGGTGACGGCGAGGGAGATCATGGAC GCCAAGGCGCTGGCGGCGTCGCGGAGCCACAGCGAGGCCGAGCGGCGGCGCCGGCAGCGC ATCAACGGCCACCTCGCCAGGCTCCGCAGCCTCCTACCCAACACCACCAAGACGGACAAG GCGTCGCTGCTGGCGGAGGTGATCGAGCACGTGAAGGAGCTGAAGCGGCAGACGACGGCG ATCGCGGCGGCAGCGGCGGCGGGGGATTACCACGGCAACGACGAGGACGACGACGATGCG GTGGTGGGGCGGCGGTCGGCGGCGGCGCAGCAGCTGCTGCCGACGGAGGCGGACGAGCTG GCGGTGGACGCGGCGGTGGACGCGGAAGGGAAGCTCGTGGTGCGTGCGTCGCTGTGCTGC GAGGACCGCCCCGACCTCATCCCGGACATCGCCCGGGCGCTCGCTGCGCTCCGCCTCCGC GCGCGCCGCGCCGAGATCACCACGCTCGGCGGCCGCGTCCGCAGCGTGCTCCTCATCACC GCCGACGAGCAGCAGCAGCAGCACTGCGACGACGTCGACGACGACGAGGACGGGCATCGC CTCCTTCTTCGCCACGGCATCGACGGCGCCGGCGCCGCCGCCGACGACGACGACGAGTGC GCGGCGTCTCACCGGAGGCACGAGTGCATAGCCACGGTCCAGGAGGCGCTGCGCGGCGTG ATGGACCGCCGGGCGGCGGCGAGCAGCGGCGACACGTCGTCGTCCGGCGGCGCTGTCGTC GCCGGCGGCGGCGGGGGCAGCATCAAGAGGCAGCGAATGAACTACGGAGTGCACGAGCAA TGCTCGGTGTAG

Peptide Sequence

PEP ID	Os09t0410700-00
PEP Infomation	pep chromosome:IRGSP-1.0:9:14583538:14586281:-1 gene:Os09g0410700 transcript:Os09t0410700-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 039 description:Helix-loop-helix DNA-binding domain containing protein. (Os09t0410700-00)
Sequence	MWEGGSHDAAAQLLPWFVGEPAAAAVGGYGGCVDVVGQGGVFGFGFEAAAAPVVTRQQRG GAAAAEGSSRGGGGKPAVVSGLLGSLQAELGRVTAREIMDAKALAASRSHSEAERRRRQR INGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTTAIAAAAAAGDYHGNDEDDDDA VVGRRSAAAQQLLPTEADELAVDAAVDAEGKLVVRASLCCEDRPDLIPDIARALAALRLR ARRAEITTLGGRVRSVLLITADEQQQQHCDDVDDDEDGHRLLLRHGIDGAGAAADDDDEC AASHRRHECIATVQEALRGVMDRRAAASSGDTSSSGGAVVAGGGGGSIKRQRMNYGVHEQ CSV

Transcript Sequence

Transcript ID	Os09t0410700-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:14583538:14586281:-1 gene:Os09g0410700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 039 description:Helix-loop-helix DNA-binding domain containing protein. (Os09t0410700-00)
Sequence	ATGTGGGAAGGCGGGAGCCACGACGCCGCGGCGCAGCTGCTGCCGTGGTTCGTCGGCGAG CCGGCAGCGGCGGCGGTGGGGGGATACGGAGGGTGTGTCGACGTGGTCGGGCAGGGCGGG GTGTTCGGGTTCGGTTTCGAGGCCGCGGCGGCGCCGGTGGTAACCAGGCAGCAGCGTGGT GGCGCGGCGGCGGCGGAGGGATCATCGAGAGGCGGTGGCGGTAAGCCGGCGGTGGTGTCC GGGCTGCTCGGCAGCCTGCAGGCGGAGCTGGGGCGGGTGACGGCGAGGGAGATCATGGAC GCCAAGGCGCTGGCGGCGTCGCGGAGCCACAGCGAGGCCGAGCGGCGGCGCCGGCAGCGC ATCAACGGCCACCTCGCCAGGCTCCGCAGCCTCCTACCCAACACCACCAAGACGGACAAG GCGTCGCTGCTGGCGGAGGTGATCGAGCACGTGAAGGAGCTGAAGCGGCAGACGACGGCG ATCGCGGCGGCAGCGGCGGCGGGGGATTACCACGGCAACGACGAGGACGACGACGATGCG GTGGTGGGGCGGCGGTCGGCGGCGGCGCAGCAGCTGCTGCCGACGGAGGCGGACGAGCTG GCGGTGGACGCGGCGGTGGACGCGGAAGGGAAGCTCGTGGTGCGTGCGTCGCTGTGCTGC GAGGACCGCCCCGACCTCATCCCGGACATCGCCCGGGCGCTCGCTGCGCTCCGCCTCCGC GCGCGCCGCGCCGAGATCACCACGCTCGGCGGCCGCGTCCGCAGCGTGCTCCTCATCACC GCCGACGAGCAGCAGCAGCAGCACTGCGACGACGTCGACGACGACGAGGACGGGCATCGC CTCCTTCTTCGCCACGGCATCGACGGCGCCGGCGCCGCCGCCGACGACGACGACGAGTGC GCGGCGTCTCACCGGAGGCACGAGTGCATAGCCACGGTCCAGGAGGCGCTGCGCGGCGTG ATGGACCGCCGGGCGGCGGCGAGCAGCGGCGACACGTCGTCGTCCGGCGGCGCTGTCGTC GCCGGCGGCGGCGGGGGCAGCATCAAGAGGCAGCGAATGAACTACGGAGTGCACGAGCAA TGCTCGGTGTAGCGTGACACACACTAGTTGCAGCTAACGTGCCGGCATTTTAGCTAGCTA CCACTTTCCATGCATGGCGTCTATGACGAGAAAGTAGCAAACTTTTTAGTTATTTTTCAA GCTTTCGGGTTGGTTTTGGGAGTAGTAGTGGTCCTTTGGTATAACGAGAGCAGCTGCTTC ATGGTGCGAAAGGGAAAAGTTTTATATGTCCCTTGTGTGTGTTGTTGTGCACACATGCGC GTGCTACACAAATTAATGCATGTGTGTGTGTTGGGAATGACTTGGATATGTAAGGGTGCA AAGCAGCTGGGGGCCAGCGAGTGGGTGTGTAAATCTACTGGTGGTATCTCTCTTGGGGTA TATCAACGAAAGGTGGAATT