Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0407900-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:14394560:14399401:-1 gene:Os09g0407900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein. (Os09t0407900-01)
Sequence	ATGGCCGCGGACGATCTCTCATCCCCGGCGCGGAAGCGCGGCCGCGACGAGGAGGAGGAG GAGGAGGAGGAGGTCATCGACGGGGAGGCCGCCCAGAAGCGCGCGCGCGGGGAGGATCCG GAGGGCGGGGCGCTGCTGGGGCTCGCCAACTACGAGGAGGACGAGGAGGACGAGGAGGCG GCGGCTGCTGCGGGGAGGCGCCGCGCGAATGGCCGACACGAGGAAGAGGAGGAGGAGGAC GACGACGACGACGAGGTTGACAACGACGTGAGGAGGGCTCCGGAGCGGAGGCCGAGGCAA GTGGAGCTGCGCCGGGACTGCCCTTACCTCGACACCGTGAACCGCCAGGTCCTTGATTTT GATTTTGAGAAGTTCTGCTCAATCTCCTTATCAAACTTGAACGTGTATGCATGTTTGGTT TGTGGAAAGTATTACCAAGGAAGAGGCTTGAAATCACATGCATATACTCACAGCCTTGAA GCAGGCCACCATGTGTTCATTAACCTTCAAACTGAGAAAGCTTACTGTCTTCCTGATGGA TATGAGATAAATGATCCATCATTGGAAGATATTCGACATGTTCTCAACCCAAGGTTTACA ACAGAGCAGGTTCGTAATCTTGATAGGAACAAGCAGTGGTCTAGAGCTCTTGATGGCTCC AATTATCTACCTGGAATGGTTGGTCTAAACAACATCAAGGAGACAGATTTTGTGAATGTC ACAATACAGTCATTAATGAGAATTACTCCTTTAAGAAATTTCTTTCTCATCCCTGAAAAT TATCGGCATAGCAAATCCCCATTGGTTCATCGATTTGGAGAACTAACTCGCAAAATCTGG CATGCAAGGAACTTCAAGGGCCAGGTTAGTCCACATGAGTTTCTGCAAGCAGTTATGAAG GCCAGTGATAAGAGGTTCCAGATTGGTGTTCAGTCTGATCCAGTGGAATTTATGTCATGG CTCTTGAACACAATGCACTCGAAACTAAAAAGTAGGAAGAGAAACAGAAGCATCATACAT GATTGCTTTCAGGGAGAACTTGAAGTAGTTAAGGAATTTCACAAGAAGCATATTGTGGAA AAGAAAGAGGACGGCGATGAACAGAATGGTGATGCAGGTTCAGATATTGTTACTGAAACA TCTAGGGTCCCATTTTTGATGCTTGGCCTTGACCTACCACCTCCACCTCTTTTCAAGGAC GCCATGGAGAAAAATATCATTCCACAGGTACCACTCTTTAATATATTGAAGAAGTTTGAT GGCGAGACAGTTACAGAGGTAGTGCGACCCTCCATTGCTCGTATGAGGTATCGAGTCATC AGACTTCCAAAGTATCTGATCCTTCACATGCGACGGTTTACCAAAAATAACTTCTTTGTA GAGAAGAATCCTACTCTAGTGAATTTCCCCGTGAAGAACTTGGAATTGAAAGATTACATC CCATTACCTAAGCCAAAAGATTCCGAGAAGCTACGCTCAAAGTATGATCTCATAGCCAAC GTTGTCCATGATGGCAAGCCAGGCGAGGGATGTTACAGAGTATTTGTACAGCGGAAATCA GAAGAGGCTTGGTATGAAATGCAAGATCTTCATGTTACCGAGACTCTTCCTCAGATGGTA GCTCTTTCAGAAGCCTACATGCAAATATACGAGCAGCACGAATGA

Peptide Sequence

PEP ID	Os09t0407900-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:14394560:14399401:-1 gene:Os09g0407900 transcript:Os09t0407900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein. (Os09t0407900-01)
Sequence	MAADDLSSPARKRGRDEEEEEEEEVIDGEAAQKRARGEDPEGGALLGLANYEEDEEDEEA AAAAGRRRANGRHEEEEEEDDDDDEVDNDVRRAPERRPRQVELRRDCPYLDTVNRQVLDF DFEKFCSISLSNLNVYACLVCGKYYQGRGLKSHAYTHSLEAGHHVFINLQTEKAYCLPDG YEINDPSLEDIRHVLNPRFTTEQVRNLDRNKQWSRALDGSNYLPGMVGLNNIKETDFVNV TIQSLMRITPLRNFFLIPENYRHSKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMK ASDKRFQIGVQSDPVEFMSWLLNTMHSKLKSRKRNRSIIHDCFQGELEVVKEFHKKHIVE KKEDGDEQNGDAGSDIVTETSRVPFLMLGLDLPPPPLFKDAMEKNIIPQVPLFNILKKFD GETVTEVVRPSIARMRYRVIRLPKYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYI PLPKPKDSEKLRSKYDLIANVVHDGKPGEGCYRVFVQRKSEEAWYEMQDLHVTETLPQMV ALSEAYMQIYEQHE

Transcript Sequence

Transcript ID	Os09t0407900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:14394560:14399401:-1 gene:Os09g0407900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein. (Os09t0407900-01)
Sequence	GCACGGCACGGCGATCCTCACGGCCTAACCGTCGCTCCATCCTCGCCCACCTCTCCTCCT TCCCCAAACCCTAGAATCTCGCCGCGCGGGCGCAGCTCCGCCCTTCGCTCGCCGTCATTT CCCGGCTTCCCCGCGCAGGGGCTAGCTAGCTAGCTAGCTAGGGTTCCGGCGCACGACGAC GATGGCCGCGGACGATCTCTCATCCCCGGCGCGGAAGCGCGGCCGCGACGAGGAGGAGGA GGAGGAGGAGGAGGTCATCGACGGGGAGGCCGCCCAGAAGCGCGCGCGCGGGGAGGATCC GGAGGGCGGGGCGCTGCTGGGGCTCGCCAACTACGAGGAGGACGAGGAGGACGAGGAGGC GGCGGCTGCTGCGGGGAGGCGCCGCGCGAATGGCCGACACGAGGAAGAGGAGGAGGAGGA CGACGACGACGACGAGGTTGACAACGACGTGAGGAGGGCTCCGGAGCGGAGGCCGAGGCA AGTGGAGCTGCGCCGGGACTGCCCTTACCTCGACACCGTGAACCGCCAGGTCCTTGATTT TGATTTTGAGAAGTTCTGCTCAATCTCCTTATCAAACTTGAACGTGTATGCATGTTTGGT TTGTGGAAAGTATTACCAAGGAAGAGGCTTGAAATCACATGCATATACTCACAGCCTTGA AGCAGGCCACCATGTGTTCATTAACCTTCAAACTGAGAAAGCTTACTGTCTTCCTGATGG ATATGAGATAAATGATCCATCATTGGAAGATATTCGACATGTTCTCAACCCAAGGTTTAC AACAGAGCAGGTTCGTAATCTTGATAGGAACAAGCAGTGGTCTAGAGCTCTTGATGGCTC CAATTATCTACCTGGAATGGTTGGTCTAAACAACATCAAGGAGACAGATTTTGTGAATGT CACAATACAGTCATTAATGAGAATTACTCCTTTAAGAAATTTCTTTCTCATCCCTGAAAA TTATCGGCATAGCAAATCCCCATTGGTTCATCGATTTGGAGAACTAACTCGCAAAATCTG GCATGCAAGGAACTTCAAGGGCCAGGTTAGTCCACATGAGTTTCTGCAAGCAGTTATGAA GGCCAGTGATAAGAGGTTCCAGATTGGTGTTCAGTCTGATCCAGTGGAATTTATGTCATG GCTCTTGAACACAATGCACTCGAAACTAAAAAGTAGGAAGAGAAACAGAAGCATCATACA TGATTGCTTTCAGGGAGAACTTGAAGTAGTTAAGGAATTTCACAAGAAGCATATTGTGGA AAAGAAAGAGGACGGCGATGAACAGAATGGTGATGCAGGTTCAGATATTGTTACTGAAAC ATCTAGGGTCCCATTTTTGATGCTTGGCCTTGACCTACCACCTCCACCTCTTTTCAAGGA CGCCATGGAGAAAAATATCATTCCACAGGTACCACTCTTTAATATATTGAAGAAGTTTGA TGGCGAGACAGTTACAGAGGTAGTGCGACCCTCCATTGCTCGTATGAGGTATCGAGTCAT CAGACTTCCAAAGTATCTGATCCTTCACATGCGACGGTTTACCAAAAATAACTTCTTTGT AGAGAAGAATCCTACTCTAGTGAATTTCCCCGTGAAGAACTTGGAATTGAAAGATTACAT CCCATTACCTAAGCCAAAAGATTCCGAGAAGCTACGCTCAAAGTATGATCTCATAGCCAA CGTTGTCCATGATGGCAAGCCAGGCGAGGGATGTTACAGAGTATTTGTACAGCGGAAATC AGAAGAGGCTTGGTATGAAATGCAAGATCTTCATGTTACCGAGACTCTTCCTCAGATGGT AGCTCTTTCAGAAGCCTACATGCAAATATACGAGCAGCACGAATGAGTGATGATTGGTGA TCATCATGTAGCACCTTGCATACCGACCTTTCTTTTGTTGCTTCTCTCAGATTTTATCAT TAGAAGCTAATCGTCATGTCTGGAGCTTTTTTTTTTAGAGAACTATGGTTGTTCCTTTAC CCTTGTTCCATACAGTTAATTGAAAAGCACAGGGTGAGAATGCTGTGTTAGAACTGTTAG ATTATCACACCGGAGGGACTATAGGAGCTAGCAGCAGTAAAATATAAAATTCATGGGCAT TTTATTTCCCAGAGCTTTGATTGACCGGTTGTTTAAAGCAGAAGACACTTCGGTTTCCAA GTATTTTCCCTTATTTATCCATGGAAGGGTGAAAATGTACAAGGGGTGTTCCGTGCAATG GGAGGCCTGTTCTGTGCGACGAGTGGAGGGAGAATTGCTTTAAGTGGTACTGTAGAAAAG AACTGGTTTCTTTGACAGCAATGGAAATATTATGCACACAAAGTATACTTAGGTATACTT TTAATGAGGTTTTAGTGAAGTTGAGGACACTTGCAATAAAATTTAATGAATTGAC