Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0401200-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:14050930:14053566:-1 gene:Os09g0401200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:THIOREDOXIN H-TYPE 3 description:Similar to tetraticopeptide domain-containing thioredoxin. (Os09t0401200-01);Natural antisense transcript (cis-NAT) of STR1, Mycorrhizal arbuscule formation (Os09t0401200-02)
Sequence	ATTTCGACTGATCGAAACCCTAGCCCTAGGCCACCGGACGCGGCGACGCCGGCGAGCCCG CGACTGCGACCTTCGCCTCGACGACCGCTCATCGTCGCGCTTCAACTAGCCGGGGAAGGC AAGGCGGAGCAGCGGCGGCGGCAAGAAGACCGCAGCAAGGCGGTAGATATGGCGACGGCT GGGGCCAGCAGCTTTGAGGACGAGATCATGGAGTCTGACATTGAGTTGGAAGGTGAAGCT GTTGAGCCAGATAATGACCCTCCTCAGAAGATGGGAGATCCATCTGTTGAAGTCTCCGAT GAGAAGCGTGACCAGGCGCAGCTGTGCAAAAACAAAGGCGTCGATGCATTTTCAGAAGGT AAATTGGATGAAGCTATTGAGCATCTGACAGAGGCTATTGTACTGAATCCGACTTCAGCT ATCGCCTATGCAACTAGGGCTGTTATTTTTGTGAAGTCAAAGAAACCAAATGCAGCTATT CGTGATGCAGATGCAGCATTAAAGATTAATCCAGATTCTGCTAAAGGATATAAATCACGA GGGATGGCAAAAGCTATGCTTGGGAAATGGGAAGAGGCTGCTCAGGACCTTCGCATGGCA GCAAAATTGGATTATGATGAAGAGATTGGAGCAGAACTTAAGAAGGTTGAACCCAATGTA CTCAAAATTGAGGAGCACAGGAAAAAATATGAAAGATTACGTAAAGAGAGGGACATTAAG AAAGCTGAAATGGAAAAACAGCGTAAACATGCAGAGGAGGTCTCTGCTGCTTCTGCTGCT CTGAAGGATGGTGATGTGATCGCTATCCACTCATCCAGTGAGCTGGACACAAAGCTGAAG GCAGCCTCAAGCCTGTCTAGGCTTGTGGTTCTCTATTTCACTGCAGCATGGTGTGGGCCA TGTCGTTTTATTGGACCTGTTTGCAAAAGCTTAGCTGAAAAGCACCGGAATGTTGTTTTC CTTAAGGTGGACATCGATGAACTAAACAGTGTCGCATATCGCTGGAACGTCTCCAGTGTT CCATCATTCTTCTTTGTGAGGAATGGAAAGGAGATCGATAAAGTTGTTGGTGCTGACAAG AATGGCCTTGAGAGGAAAGTTGCTCAGCATGGATCATCCTAA

Peptide Sequence

PEP ID	Os09t0401200-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:14050930:14053566:-1 gene:Os09g0401200 transcript:Os09t0401200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:THIOREDOXIN H-TYPE 3 description:Similar to tetraticopeptide domain-containing thioredoxin. (Os09t0401200-01);Natural antisense transcript (cis-NAT) of STR1, Mycorrhizal arbuscule formation (Os09t0401200-02)
Sequence	ISTDRNPSPRPPDAATPASPRLRPSPRRPLIVALQLAGEGKAEQRRRQEDRSKAVDMATA GASSFEDEIMESDIELEGEAVEPDNDPPQKMGDPSVEVSDEKRDQAQLCKNKGVDAFSEG KLDEAIEHLTEAIVLNPTSAIAYATRAVIFVKSKKPNAAIRDADAALKINPDSAKGYKSR GMAKAMLGKWEEAAQDLRMAAKLDYDEEIGAELKKVEPNVLKIEEHRKKYERLRKERDIK KAEMEKQRKHAEEVSAASAALKDGDVIAIHSSSELDTKLKAASSLSRLVVLYFTAAWCGP CRFIGPVCKSLAEKHRNVVFLKVDIDELNSVAYRWNVSSVPSFFFVRNGKEIDKVVGADK NGLERKVAQHGSS

Transcript Sequence

Transcript ID	Os09t0401200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:14050930:14053566:-1 gene:Os09g0401200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:THIOREDOXIN H-TYPE 3 description:Similar to tetraticopeptide domain-containing thioredoxin. (Os09t0401200-01);Natural antisense transcript (cis-NAT) of STR1, Mycorrhizal arbuscule formation (Os09t0401200-02)
Sequence	AAATTTCGACTGATCGAAACCCTAGCCCTAGGCCACCGGACGCGGCGACGCCGGCGAGCC CGCGACTGCGACCTTCGCCTCGACGACCGCTCATCGTCGCGCTTCAACTAGCCGGGGAAG GCAAGGCGGAGCAGCGGCGGCGGCAAGAAGACCGCAGCAAGGCGGTAGATATGGCGACGG CTGGGGCCAGCAGCTTTGAGGACGAGATCATGGAGTCTGACATTGAGTTGGAAGGTGAAG CTGTTGAGCCAGATAATGACCCTCCTCAGAAGATGGGAGATCCATCTGTTGAAGTCTCCG ATGAGAAGCGTGACCAGGCGCAGCTGTGCAAAAACAAAGGCGTCGATGCATTTTCAGAAG GTAAATTGGATGAAGCTATTGAGCATCTGACAGAGGCTATTGTACTGAATCCGACTTCAG CTATCGCCTATGCAACTAGGGCTGTTATTTTTGTGAAGTCAAAGAAACCAAATGCAGCTA TTCGTGATGCAGATGCAGCATTAAAGATTAATCCAGATTCTGCTAAAGGATATAAATCAC GAGGGATGGCAAAAGCTATGCTTGGGAAATGGGAAGAGGCTGCTCAGGACCTTCGCATGG CAGCAAAATTGGATTATGATGAAGAGATTGGAGCAGAACTTAAGAAGGTTGAACCCAATG TACTCAAAATTGAGGAGCACAGGAAAAAATATGAAAGATTACGTAAAGAGAGGGACATTA AGAAAGCTGAAATGGAAAAACAGCGTAAACATGCAGAGGAGGTCTCTGCTGCTTCTGCTG CTCTGAAGGATGGTGATGTGATCGCTATCCACTCATCCAGTGAGCTGGACACAAAGCTGA AGGCAGCCTCAAGCCTGTCTAGGCTTGTGGTTCTCTATTTCACTGCAGCATGGTGTGGGC CATGTCGTTTTATTGGACCTGTTTGCAAAAGCTTAGCTGAAAAGCACCGGAATGTTGTTT TCCTTAAGGTGGACATCGATGAACTAAACAGTGTCGCATATCGCTGGAACGTCTCCAGTG TTCCATCATTCTTCTTTGTGAGGAATGGAAAGGAGATCGATAAAGTTGTTGGTGCTGACA AGAATGGCCTTGAGAGGAAAGTTGCTCAGCATGGATCATCCTAAACTGTGAGCAGTCCTG TTACTTGTCTTACTTCTATGCTGTATGTTTTATGACGTGGAATAAGTGCTTATGGATAAA AGTTGACATACACATCGAGAACTTTTTAGCTGTTCTGTGTACTTTCTGTGTTGCTCTATG CCTTGCTGGAGGCTGGATATATTTTGATGATCGTTGCAAATAACTTCAGCAATCTTATGT TGGCCCAAAAACTAATATTGGTTTTACTGG