Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0400000-00
CDS Infomation

cds chromosome:IRGSP-1.0:9:13987065:13988779:-1 gene:Os09g0400000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CINNAMYL ALCOHOL DEHYDROGENASE 8B description:Cinnamyl alcohol dehydrogenase (EC 1.1.1.195). (Os09t0400000-00)
Sequence

ATGTCACGTCATTTTCGCACGCACACCACCTCGCGTCTCACCTTCCCCTCTTCCTCCGGT
GGACTCGCAATCACTCGCTTGCCATTCTCCAGCACCAGCAGCAAGCTTCTTCTTCAGCAA
CTCAGCAGCACTTCACCTGCTGCTGCTGCGACCGCCGTGACCATCACCACCTCGTCGCCG
GCGAGAAACCTGCAGAGGGCGAGGGCGAGTGCGGCGGAGCAGGGGATGGAGGAGCATGGC
AAGGCGGCTGTCGGCTGGGCGGCCAGGGACGACTCCGGCGTCCTCTCCCCGTACAACTTC
TCCAGGAGGGCTCAGAAGGACGATGACGTCACCATCAAGGTGCTCTACTGCGGCATCTGC
CACACCGACCTGCACGTCGTCAAGAACGATTGGGGCAACGCCATGTACCCCGTCGTCCCC
GGCCACGAGATCGTCGGCGTCGTCACCGGCGTCGGCGCCGGCGTGACCAAGTTCAAGGCC
GGCGACACGGTGGGCGTGGGCTTCTTCGTCGGGTCGTGCCGCACCTGCGACAGCTGCGGC
AAGGGGTACGAGAACTACTGCCCGACGATGGTGATCACGTCGAACGGCAAGGACTACGGC
GGCGCGGCCACCCAGGGCGGCTTCTCCGACGCCATCGTCGTGAACGAACACTACGTGCTC
CGCGTGCCGGCGGGGCTGCCGCTGGACGGCGCGGCGCCGCTGCTGTGCGCCGGCGTGACG
GTGTACAGCCCGATGGTGATCCACGGGCTGAACGCGCCGGGGAAGCACGTCGGCGTGGTC
GGCCTCGGCGGGCTCGGCCACGTCGCCGTCAAGTTCGCCAAGGCGTTCGGGATGCGCGTC
ACCGTCATCAGCACGTCGCCGGGGAAGCGGCGGGAGGCGCTGGAGCACCTCGGCGCCGAC
GAGTTCCTCGTCAGCCGCGACGCGGGCCAGATGGCGGCGGCGGCGGGCACCATGGACGGG
ATCCTCAACACGGTGTCGGCGTGGCACCCGGTCGCGCCGCTGTTCGCACTGATGAAGCCG
ATGGCGCAGATGGTGTTCGTCGGCGCGCCGACCAGGCCGCTGGAGCTGCCGGCGTACGCC
ATCGTCCCGGGAGGGAAGGGCATCACCGGCAACTGCGTCGGCGGCATCAGGGACTGCCAG
GCCATGCTCGACTTCGCCGGCGAGCACGGAATCACCGCCGAGGTGGAGGTGATCAAGATG
GACTACGTCAACACCGCGATGGAGCGGCTGGAGAAGAACGACGTCCGCTACCGCTTCGTC
ATCGACGTCGCCGGCAGCAGCCTCGGCGGCTCCGGCGACGACAAGATATAA

Peptide Sequence

PEP ID

Os09t0400000-00
PEP Infomation

pep chromosome:IRGSP-1.0:9:13987065:13988779:-1 gene:Os09g0400000 transcript:Os09t0400000-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CINNAMYL ALCOHOL DEHYDROGENASE 8B description:Cinnamyl alcohol dehydrogenase (EC 1.1.1.195). (Os09t0400000-00)
Sequence

MSRHFRTHTTSRLTFPSSSGGLAITRLPFSSTSSKLLLQQLSSTSPAAAATAVTITTSSP
ARNLQRARASAAEQGMEEHGKAAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGIC
HTDLHVVKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGFFVGSCRTCDSCG
KGYENYCPTMVITSNGKDYGGAATQGGFSDAIVVNEHYVLRVPAGLPLDGAAPLLCAGVT
VYSPMVIHGLNAPGKHVGVVGLGGLGHVAVKFAKAFGMRVTVISTSPGKRREALEHLGAD
EFLVSRDAGQMAAAAGTMDGILNTVSAWHPVAPLFALMKPMAQMVFVGAPTRPLELPAYA
IVPGGKGITGNCVGGIRDCQAMLDFAGEHGITAEVEVIKMDYVNTAMERLEKNDVRYRFV
IDVAGSSLGGSGDDKI

Transcript Sequence

Transcript ID

Os09t0400000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:13987065:13988779:-1 gene:Os09g0400000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CINNAMYL ALCOHOL DEHYDROGENASE 8B description:Cinnamyl alcohol dehydrogenase (EC 1.1.1.195). (Os09t0400000-00)
Sequence

ATGTCACGTCATTTTCGCACGCACACCACCTCGCGTCTCACCTTCCCCTCTTCCTCCGGT
GGACTCGCAATCACTCGCTTGCCATTCTCCAGCACCAGCAGCAAGCTTCTTCTTCAGCAA
CTCAGCAGCACTTCACCTGCTGCTGCTGCGACCGCCGTGACCATCACCACCTCGTCGCCG
GCGAGAAACCTGCAGAGGGCGAGGGCGAGTGCGGCGGAGCAGGGGATGGAGGAGCATGGC
AAGGCGGCTGTCGGCTGGGCGGCCAGGGACGACTCCGGCGTCCTCTCCCCGTACAACTTC
TCCAGGAGGGCTCAGAAGGACGATGACGTCACCATCAAGGTGCTCTACTGCGGCATCTGC
CACACCGACCTGCACGTCGTCAAGAACGATTGGGGCAACGCCATGTACCCCGTCGTCCCC
GGCCACGAGATCGTCGGCGTCGTCACCGGCGTCGGCGCCGGCGTGACCAAGTTCAAGGCC
GGCGACACGGTGGGCGTGGGCTTCTTCGTCGGGTCGTGCCGCACCTGCGACAGCTGCGGC
AAGGGGTACGAGAACTACTGCCCGACGATGGTGATCACGTCGAACGGCAAGGACTACGGC
GGCGCGGCCACCCAGGGCGGCTTCTCCGACGCCATCGTCGTGAACGAACACTACGTGCTC
CGCGTGCCGGCGGGGCTGCCGCTGGACGGCGCGGCGCCGCTGCTGTGCGCCGGCGTGACG
GTGTACAGCCCGATGGTGATCCACGGGCTGAACGCGCCGGGGAAGCACGTCGGCGTGGTC
GGCCTCGGCGGGCTCGGCCACGTCGCCGTCAAGTTCGCCAAGGCGTTCGGGATGCGCGTC
ACCGTCATCAGCACGTCGCCGGGGAAGCGGCGGGAGGCGCTGGAGCACCTCGGCGCCGAC
GAGTTCCTCGTCAGCCGCGACGCGGGCCAGATGGCGGCGGCGGCGGGCACCATGGACGGG
ATCCTCAACACGGTGTCGGCGTGGCACCCGGTCGCGCCGCTGTTCGCACTGATGAAGCCG
ATGGCGCAGATGGTGTTCGTCGGCGCGCCGACCAGGCCGCTGGAGCTGCCGGCGTACGCC
ATCGTCCCGGGAGGGAAGGGCATCACCGGCAACTGCGTCGGCGGCATCAGGGACTGCCAG
GCCATGCTCGACTTCGCCGGCGAGCACGGAATCACCGCCGAGGTGGAGGTGATCAAGATG
GACTACGTCAACACCGCGATGGAGCGGCTGGAGAAGAACGACGTCCGCTACCGCTTCGTC
ATCGACGTCGCCGGCAGCAGCCTCGGCGGCTCCGGCGACGACAAGATATAA