Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0396900-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:13831868:13833654:1 gene:Os09g0396900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Vacuolar Iron Transporter 2 description:Protein of unknown function DUF125, transmembrane family protein. (Os09t0396900-01);Vacuolar membrane transporter, Fe and Zn translocation between flag leaves and seeds (Os09t0396900-02)
Sequence	ATGGTGAAGGAGTTCGTGCAGGACGAGGAGAAGCAGCGGCTGCTGCTGGACGAGCACACC GAGAAGCACTTCACCGCCGGCGAGGTGGTCCGCGACATCATCATCGGCGTCTCCGACGGC CTCACCGTGCCGTTCGCCCTCGCCGCCGGCCTGTCCGGCGCCAACGCCCCCTCCGCCCTC GTCCTCACCGCCGGCCTCGCCGAGGTCGCCGCCGGCGCCATCTCCATGGGCCTCGGAGGG TATCTGGCGGCGAAGAGCGACGCCGACCACTACCACCGCGAGCTGCAGAGGGAGCAGGAG GAGATCGACACCGTGCCGGACACAGAGGCCGCGGAGATCGCGGACATACTGTCGCAGTAT GGGCTGGGCCCAGAGGAGTATGGGCCCGTTGTTAACTCCCTCCGCAGCAACCCCAAGGCC TGGCTCGAATTCATGATGAAGTTTGAGTTGGGACTGGAGAAGCCGGAACCAAGGAGGGCG CTGATGAGCGCGGGAACGATCGCGCTGGCTTATGTGGTGGGTGGGCTGGTGCCACTCCTA CCCTACATGTTTGTGCCGACGGCCGACCGAGCCATGGCCACCTCGGTCGTCGTCACGCTC GCCGCACTTCTCTTCTTCGGCTATGTCAAGGGCCGGTTTACTGGCAACCGGCCCTTCATC AGCGCCTTCCAGACCGCTGTTATCGGCGCTCTCGCCTCCGCCGCCGCCTTCGGCATGGCC AAGGCCGTGCAGTCCATCTAA

Peptide Sequence

PEP ID	Os09t0396900-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:13831868:13833654:1 gene:Os09g0396900 transcript:Os09t0396900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Vacuolar Iron Transporter 2 description:Protein of unknown function DUF125, transmembrane family protein. (Os09t0396900-01);Vacuolar membrane transporter, Fe and Zn translocation between flag leaves and seeds (Os09t0396900-02)
Sequence	MVKEFVQDEEKQRLLLDEHTEKHFTAGEVVRDIIIGVSDGLTVPFALAAGLSGANAPSAL VLTAGLAEVAAGAISMGLGGYLAAKSDADHYHRELQREQEEIDTVPDTEAAEIADILSQY GLGPEEYGPVVNSLRSNPKAWLEFMMKFELGLEKPEPRRALMSAGTIALAYVVGGLVPLL PYMFVPTADRAMATSVVVTLAALLFFGYVKGRFTGNRPFISAFQTAVIGALASAAAFGMA KAVQSI

Transcript Sequence

Transcript ID	Os09t0396900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:13831868:13833654:1 gene:Os09g0396900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Vacuolar Iron Transporter 2 description:Protein of unknown function DUF125, transmembrane family protein. (Os09t0396900-01);Vacuolar membrane transporter, Fe and Zn translocation between flag leaves and seeds (Os09t0396900-02)
Sequence	TCGCTCACACATCGATCACAGAAAGCTAAGCTAAAGTGCTAAACTAAGCACGAGAAAATC TAATCAACCAAGCTTAGATTAGATCATTAGCTATATATAGCTAGGCGATTTAATCATCCA CGAGCTAGCTTATTAGCTAAGCAGTAGCAGCAGCAGAAGATCGAAGATGGTGAAGGAGTT CGTGCAGGACGAGGAGAAGCAGCGGCTGCTGCTGGACGAGCACACCGAGAAGCACTTCAC CGCCGGCGAGGTGGTCCGCGACATCATCATCGGCGTCTCCGACGGCCTCACCGTGCCGTT CGCCCTCGCCGCCGGCCTGTCCGGCGCCAACGCCCCCTCCGCCCTCGTCCTCACCGCCGG CCTCGCCGAGGTCGCCGCCGGCGCCATCTCCATGGGCCTCGGAGGGTATCTGGCGGCGAA GAGCGACGCCGACCACTACCACCGCGAGCTGCAGAGGGAGCAGGAGGAGATCGACACCGT GCCGGACACAGAGGCCGCGGAGATCGCGGACATACTGTCGCAGTATGGGCTGGGCCCAGA GGAGTATGGGCCCGTTGTTAACTCCCTCCGCAGCAACCCCAAGGCCTGGCTCGAATTCAT GATGAAGTTTGAGTTGGGACTGGAGAAGCCGGAACCAAGGAGGGCGCTGATGAGCGCGGG AACGATCGCGCTGGCTTATGTGGTGGGTGGGCTGGTGCCACTCCTACCCTACATGTTTGT GCCGACGGCCGACCGAGCCATGGCCACCTCGGTCGTCGTCACGCTCGCCGCACTTCTCTT CTTCGGCTATGTCAAGGGCCGGTTTACTGGCAACCGGCCCTTCATCAGCGCCTTCCAGAC CGCTGTTATCGGCGCTCTCGCCTCCGCCGCCGCCTTCGGCATGGCCAAGGCCGTGCAGTC CATCTAAGTACTGTAGCCGGAGCTCCGGCTGCAGGCATCCAAGTAAATGTAATTAATTTA GCAGATCCAATAAGTATTGCAGAAATGTATGTATAAGTATTTATGTACGTTTGCTGCGTG CTTGTAGTGTATTAGATGTTCTGGAGGTGTATCCGTAGTTAGCCCTAAGTGTACCATGTA CACGAGTGTAATCACTCATTTTATATCGTCTTCTATTTTGGCTCCCTTTTTTATATTCGG TTGGGATTAATTAATAATGTATTGTCGATTTGTAAGCAATGATGTGCTTTGTTATCTATA CTTACTTAATTTAATTAGGTAGTTCGGTGC