Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0396300-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:13813683:13816679:1 gene:Os09g0396300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C15, pyroglutamyl peptidase I family protein. (Os09t0396300-01)
Sequence

ATGGGTTCAGAAGGACCTTCAGTTGTTACTGTACATGTGACTGGATTTAAGAAGTTTCAT
GGGGTTGCTGAGAACCCAACTGAGAAAATTGTGACCAATCTTAAATCATTCGTGGAAAAG
AAAGGATTGCCAAAAAACCTTGTGCTTGGAAGCTGCACAGTTCTTGAAACTGCAGGGCAG
GGGGCACTTGGCACATTATATAAGGTTTTGGAATCTTCCATTGCGGAAAGGGAGAATGGG
TCATCGGCTCAGGGGCAAGTAATTTGGATCCACTTTGGAGTCAATAGTGGTGCAACAAGG
TTTGCTCTTGAGAATCAAGCTGTTAATGAAGCCACCTTCCGTTGTCCAGATGAGCTAGGG
TGGAAACCTCAGAGGGCTCCCATTGTGCCATCTGATGGAGGAATCTCACGCACAAGAGAG
ACTACCCTTCCGGTAAATGAGTTAACCAAGTCACTCCGGAAGACAGGCTATGATGTAATG
CCATCAGACGATGCTGGTCGGTTCGTATGCAACTATGTGTATTATCACTCTCTTCGGTTT
GCAGAGCAACACGGCATCAAATCTCTGTTTGTACATGTGCCCCTGTTCTTGACGATCGAT
GAGGAGGTCCAGATGCATTTTGTTGCTTCCCTTCTCGAAGCTCTATCTTGA

Peptide Sequence

PEP ID

Os09t0396300-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:13813683:13816679:1 gene:Os09g0396300 transcript:Os09t0396300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C15, pyroglutamyl peptidase I family protein. (Os09t0396300-01)
Sequence

MGSEGPSVVTVHVTGFKKFHGVAENPTEKIVTNLKSFVEKKGLPKNLVLGSCTVLETAGQ
GALGTLYKVLESSIAERENGSSAQGQVIWIHFGVNSGATRFALENQAVNEATFRCPDELG
WKPQRAPIVPSDGGISRTRETTLPVNELTKSLRKTGYDVMPSDDAGRFVCNYVYYHSLRF
AEQHGIKSLFVHVPLFLTIDEEVQMHFVASLLEALS

Transcript Sequence

Transcript ID

Os09t0396300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:13813683:13816679:1 gene:Os09g0396300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C15, pyroglutamyl peptidase I family protein. (Os09t0396300-01)
Sequence

AGAAAAGAAAAAAAAAGAAAAGAAAAAGAAAAACCGAGTCGTCTCGTCTCCATTGCGGCG
GCGCGAGCTTTGGACTCGTCGTCTCCGTCCCGCGCGCGACGAGCGCGACCAGCGGCCGCC
GGCGTCTGCTGCTTGCTCGCTTGCTTGCTTCCGCCCCGCCGGCGCCCTCGCTTCGCTGTC
CGCTGTGTTCAGGATTTTGGGATAAGGCTATTTGTTATTTCTCAAAAGTGTAAATGGGTT
CAGAAGGACCTTCAGTTGTTACTGTACATGTGACTGGATTTAAGAAGTTTCATGGGGTTG
CTGAGAACCCAACTGAGAAAATTGTGACCAATCTTAAATCATTCGTGGAAAAGAAAGGAT
TGCCAAAAAACCTTGTGCTTGGAAGCTGCACAGTTCTTGAAACTGCAGGGCAGGGGGCAC
TTGGCACATTATATAAGGTTTTGGAATCTTCCATTGCGGAAAGGGAGAATGGGTCATCGG
CTCAGGGGCAAGTAATTTGGATCCACTTTGGAGTCAATAGTGGTGCAACAAGGTTTGCTC
TTGAGAATCAAGCTGTTAATGAAGCCACCTTCCGTTGTCCAGATGAGCTAGGGTGGAAAC
CTCAGAGGGCTCCCATTGTGCCATCTGATGGAGGAATCTCACGCACAAGAGAGACTACCC
TTCCGGTAAATGAGTTAACCAAGTCACTCCGGAAGACAGGCTATGATGTAATGCCATCAG
ACGATGCTGGTCGGTTCGTATGCAACTATGTGTATTATCACTCTCTTCGGTTTGCAGAGC
AACACGGCATCAAATCTCTGTTTGTACATGTGCCCCTGTTCTTGACGATCGATGAGGAGG
TCCAGATGCATTTTGTTGCTTCCCTTCTCGAAGCTCTATCTTGAATTAGGAAGAAAAATA
CAATTTAAGGTTGGAAGCGGACTGAATAAAATTGTATTGTCATCGATGATATTGGTCTTG
CTCCAACGGGTGTATTTAAGGGGAAATGGCTGCTTAGAGTGTGTTCTTGGTG