Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0394700-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:13695392:13699818:-1 gene:Os09g0394700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Lysophospholipase-like protein. (Os09t0394700-01)
Sequence	ATGTGGGCCCCCACGGCCTCGCCGGCGGCTGCGGCGGGGAGGGCGGCGATCCCGTCGCTC CGGCGGTGGCCGGCGGCGGCCGCGGGGGTGCGGATCGTCGTCGCGGTGGCTCCTGTCAAG GCGAGGGCGCCGCGGCGGCTGCGGCTCTGCCTCGCGGTGCCGCCGCCCGCGTCCGAGATG GCCGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGTGG AGCAAGGCGGTGGAGCTGGACGCGGCGGCGAGGCGGGAGATGGCGATCCGGAGGCTGCAG GAGGAGGCGGGGACGGGGAGCAGCAGGAGGGAGTTCGCCGTGTTCGAGACGGCCAGGGGG GACGCTCTCTTCACGCAGTCGTGGACCCCGGTCGCCGCCGCCGATCGCGTCAAGGGCATC GTTGTTCTGTTACATGGACTAAATGAGCATAGTGGGAGGTACAACCATTTTGCAAAGCTG TTAAATGATCATGGGCTTAAAGTTTATGCAATGGACTGGATTGGACATGGTGGAAGTGAT GGGGTGCATGGCTATGTTTCATCGCTTGATCATGCTGTTGGTGACCTGAAAGAATTTCTA GAGGATGTTGTACTGGAGGAAAACTATGGTTTGCCATGTTTCTTATTTGGCCACTCCACA GGTGGAGCTATTGTTTTGAAGGCAGTCCTGGATCCTTGTGTTGAAGTTCATGTTGAAGGT GTGATCTTGACATCTCCGGCTATTCATGTTCAACCATCTCATCCAATTATCAAAGTTGTT GCACCTATCTTCTCTGTGTTAGCTCCAAAATACCGAGTTGCTGCTTTGCACAGGAGAGGA CCTCCTGTTTCCCGTGATCCTGAGGCTTTGAAGATCAAGTATGCAGATCCACTTGTGTAT ACTGGACCCATTAGAGTTAGAACTGGCAATGAAATTCTTCGGATATCATCATATTTGCAA AGAAACTTAAGCAGAGTAACTGTCCCTTTTTTAGTTCTGCATGGCACAGCTGACACAATA ACTGACCCCGGAGCATCTCAACGACTGTACCAATCATCAGCATCAGCACATAAATCTATA AAACTGTATGATGGATATTTACATGATCTTCTCTTTGAACCTGAAAGGGATGATATAGCA AATGACATCATCAATTGGTTAAGCTCAAGACTTGATGTTCTCCAGAGATGGTGA

Peptide Sequence

PEP ID	Os09t0394700-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:13695392:13699818:-1 gene:Os09g0394700 transcript:Os09t0394700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Lysophospholipase-like protein. (Os09t0394700-01)
Sequence	MWAPTASPAAAAGRAAIPSLRRWPAAAAGVRIVVAVAPVKARAPRRLRLCLAVPPPASEM AAAAAAAEEEEEEEEEEEGWSKAVELDAAARREMAIRRLQEEAGTGSSRREFAVFETARG DALFTQSWTPVAAADRVKGIVVLLHGLNEHSGRYNHFAKLLNDHGLKVYAMDWIGHGGSD GVHGYVSSLDHAVGDLKEFLEDVVLEENYGLPCFLFGHSTGGAIVLKAVLDPCVEVHVEG VILTSPAIHVQPSHPIIKVVAPIFSVLAPKYRVAALHRRGPPVSRDPEALKIKYADPLVY TGPIRVRTGNEILRISSYLQRNLSRVTVPFLVLHGTADTITDPGASQRLYQSSASAHKSI KLYDGYLHDLLFEPERDDIANDIINWLSSRLDVLQRW

Transcript Sequence

Transcript ID	Os09t0394700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:13695392:13699818:-1 gene:Os09g0394700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Lysophospholipase-like protein. (Os09t0394700-01)
Sequence	ATATTCGTCTGCGTTTTTTTTCTCCCTCCTCCTCCTCCTCCCCGACATGTGGGCCCCCAC GGCCTCGCCGGCGGCTGCGGCGGGGAGGGCGGCGATCCCGTCGCTCCGGCGGTGGCCGGC GGCGGCCGCGGGGGTGCGGATCGTCGTCGCGGTGGCTCCTGTCAAGGCGAGGGCGCCGCG GCGGCTGCGGCTCTGCCTCGCGGTGCCGCCGCCCGCGTCCGAGATGGCCGCGGCGGCGGC GGCGGCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGTGGAGCAAGGCGGTGGA GCTGGACGCGGCGGCGAGGCGGGAGATGGCGATCCGGAGGCTGCAGGAGGAGGCGGGGAC GGGGAGCAGCAGGAGGGAGTTCGCCGTGTTCGAGACGGCCAGGGGGGACGCTCTCTTCAC GCAGTCGTGGACCCCGGTCGCCGCCGCCGATCGCGTCAAGGGCATCGTTGTTCTGTTACA TGGACTAAATGAGCATAGTGGGAGGTACAACCATTTTGCAAAGCTGTTAAATGATCATGG GCTTAAAGTTTATGCAATGGACTGGATTGGACATGGTGGAAGTGATGGGGTGCATGGCTA TGTTTCATCGCTTGATCATGCTGTTGGTGACCTGAAAGAATTTCTAGAGGATGTTGTACT GGAGGAAAACTATGGTTTGCCATGTTTCTTATTTGGCCACTCCACAGGTGGAGCTATTGT TTTGAAGGCAGTCCTGGATCCTTGTGTTGAAGTTCATGTTGAAGGTGTGATCTTGACATC TCCGGCTATTCATGTTCAACCATCTCATCCAATTATCAAAGTTGTTGCACCTATCTTCTC TGTGTTAGCTCCAAAATACCGAGTTGCTGCTTTGCACAGGAGAGGACCTCCTGTTTCCCG TGATCCTGAGGCTTTGAAGATCAAGTATGCAGATCCACTTGTGTATACTGGACCCATTAG AGTTAGAACTGGCAATGAAATTCTTCGGATATCATCATATTTGCAAAGAAACTTAAGCAG AGTAACTGTCCCTTTTTTAGTTCTGCATGGCACAGCTGACACAATAACTGACCCCGGAGC ATCTCAACGACTGTACCAATCATCAGCATCAGCACATAAATCTATAAAACTGTATGATGG ATATTTACATGATCTTCTCTTTGAACCTGAAAGGGATGATATAGCAAATGACATCATCAA TTGGTTAAGCTCAAGACTTGATGTTCTCCAGAGATGGTGAAGTGAATCAGCTATATGGTG CTCCCACTTATGTCAGATATTGGAACATGGTATAGAAGAGAAAGGCTAATTGTAAAACAT TTTGTTTTAGATTGCTGCCTTTGCCTTTGTGTAGATGGTTTTTGTTTAGTTATTTCAATC ATGGTGGGAAATTAACCCACCTGAGATGTAAGTAGTGCAAGATTAGAGTCATGTTGAAAA TCATGTACTTCATTATGGTATTAGTAAATACTAATTCTAAAAGAAAAACATGAGTTCACC ATTGATTTTGG