Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0394500-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:13666487:13671252:1 gene:Os09g0394500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os09t0394500-01)
Sequence	ATGCAGCCGCCGCCGCCGCCGCCCCATCCCGCCGCGCTGCTGCCGCTGCCGCTGCCGCTG CCGTTCTGCCTCCCCGCCGCGCCGCGGGTGCGGGGGCGCGGCGGCACGGCCGTGGCGGCG CTCGGGGCGCTCTGGCCGCCGCGGCTCGTCGCCGTCGAGAGCAGGCCGCCGCCGCCGTCC AGCCCGGCCTCAGCGTCGGCCCCGCCGCCGCTCCCGGAGAGCGCCGCCGCAGGATTGGAT GCGGGGATTGGGGGAGGCGGTGGTGGAGATGGAGGCGGCGGTGCTGATCTCGGGTGGCTG CGGGTGTTCCCGCACGTGCTCACGGCGTCCATGGCCAACTTCCTCTTCGGCTACCACATC GGGGTCATGAATGGTCCAATAGAGGATATAGCACGGGAGCTTGGTTTTCAGGGGAATCCA TTTCTCCAAGGTCTTGTGGTCAGCATATTCATTGTTGGAGCATTTTTCGGAAGCTTAGGC TCATCTGCACTAGTCGACAATTTTGGATGTAAAAGGACTCTTCAAATTGATAGCATTCCG CTGATTCTTGGTGCACTTCTCAGTGCACAGGCAGATTCGTTGGATGAGATGCTCTTGGGA AGATTCCTTGTTGGCATTGGAATTGGCATAAATACAGTGCTCGTTCCACTATATGTCTCC GAGGTTGCTCCAACAAAATACAGGGGTTCTTTGGGGACTCTATGTCAGATCGGAACATGT TTGGGAATAATCGCTGCATTCTCATTGGGAATACCATCTGAAAGTGACCCACATTGGTGG CGGACAATGCTTTATGCTGCATGTGTACCTGGTGTTCTTATTGTTGCTGGAATGCAATTT GCTGTTGAGAGTCCCCGCTGGCTTGCCAAGGTTGGAAGAATAGATGATGCCAGAAATGTT GTAGAACATGTTTGGGGACCTTCTGAAGTTGAGAAGTCCATGGAAGAGATCCAATCTGTT GTTGCAAATGATGATTCGCAGGCTAGCTGGTCAGAACTTCTGGAAGAACCCCACAATAGA GTTGCACTGATTGGAGGGTCCCTTTTCTTTCTGCAACAGTTTGCTGGCATAAATGGCGTT CTGTACTTCTCATCATTAACATTCCGTGATGTTGGTATTACCAGTGGTATCTTGGCAAGC CTATATGTTGGAATAACTAATTTTGCAGGGGCAATTGTTGCTTCAATTTTGATGGATAAG CAAGGTCGAAAGAAACTCTTGACAGGAAGCTATCTTGGAATGGCACTTGCAATGTTCCTA ATAGTATATGCCATTAGCTTCCCCCTTGATGAAGGAGTTAGCCATGGCCTGTCAATTACT GGAACTCTGTTGTACATATTTACATTCGCCATTGGAGCCGGACCAGTTACAGGAATCATC ATACCAGAGCTGAGTGGTGCTCGGACACGCTCGAAAGTTATGGGCTTCAGCTTCACTGTA CATTGGATATGCAATTTTCTGGTGGGACTGTATTTCCTGGAGCTTGCGAAGAAGTTAGGC GTTGGAGCCGTCTATGCAGGTTTTGGTGGAGTATCCTTGTTGTCAGCACTTTTCGCCTAC AATTTCATTGTCGAGACGAAAGGACGTTCTCTTGAGGAAATCGAAATGTCTCTGAGCCCT GCTGCCCCTGGCAAGCGAGAGTGA

Peptide Sequence

PEP ID	Os09t0394500-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:13666487:13671252:1 gene:Os09g0394500 transcript:Os09t0394500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os09t0394500-01)
Sequence	MQPPPPPPHPAALLPLPLPLPFCLPAAPRVRGRGGTAVAALGALWPPRLVAVESRPPPPS SPASASAPPPLPESAAAGLDAGIGGGGGGDGGGGADLGWLRVFPHVLTASMANFLFGYHI GVMNGPIEDIARELGFQGNPFLQGLVVSIFIVGAFFGSLGSSALVDNFGCKRTLQIDSIP LILGALLSAQADSLDEMLLGRFLVGIGIGINTVLVPLYVSEVAPTKYRGSLGTLCQIGTC LGIIAAFSLGIPSESDPHWWRTMLYAACVPGVLIVAGMQFAVESPRWLAKVGRIDDARNV VEHVWGPSEVEKSMEEIQSVVANDDSQASWSELLEEPHNRVALIGGSLFFLQQFAGINGV LYFSSLTFRDVGITSGILASLYVGITNFAGAIVASILMDKQGRKKLLTGSYLGMALAMFL IVYAISFPLDEGVSHGLSITGTLLYIFTFAIGAGPVTGIIIPELSGARTRSKVMGFSFTV HWICNFLVGLYFLELAKKLGVGAVYAGFGGVSLLSALFAYNFIVETKGRSLEEIEMSLSP AAPGKRE

Transcript Sequence

Transcript ID	Os09t0394500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:13666487:13671252:1 gene:Os09g0394500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os09t0394500-01)
Sequence	GGCGGCCTCCGCCTCACGCAAAAAAAAATCTCTCAGGCGAGTTGGGGGTGGGTGGGCCCC ACATAGAAACCGCGGGTGGGCCCCACGCAGAGACCGGGGCCCTTCTCTCACGGAAGCCGC GGCCCGCGGGTGCCTAGCCCAACCCCCGGCTTCTCCCGCCTCCTCTCCTCTCCTCTCCTC TGCGCGCGCGCCACCTGCTCGACGGATTGCCCCGCCGGGGAGACATGCAGCCGCCGCCGC CGCCGCCCCATCCCGCCGCGCTGCTGCCGCTGCCGCTGCCGCTGCCGTTCTGCCTCCCCG CCGCGCCGCGGGTGCGGGGGCGCGGCGGCACGGCCGTGGCGGCGCTCGGGGCGCTCTGGC CGCCGCGGCTCGTCGCCGTCGAGAGCAGGCCGCCGCCGCCGTCCAGCCCGGCCTCAGCGT CGGCCCCGCCGCCGCTCCCGGAGAGCGCCGCCGCAGGATTGGATGCGGGGATTGGGGGAG GCGGTGGTGGAGATGGAGGCGGCGGTGCTGATCTCGGGTGGCTGCGGGTGTTCCCGCACG TGCTCACGGCGTCCATGGCCAACTTCCTCTTCGGCTACCACATCGGGGTCATGAATGGTC CAATAGAGGATATAGCACGGGAGCTTGGTTTTCAGGGGAATCCATTTCTCCAAGGTCTTG TGGTCAGCATATTCATTGTTGGAGCATTTTTCGGAAGCTTAGGCTCATCTGCACTAGTCG ACAATTTTGGATGTAAAAGGACTCTTCAAATTGATAGCATTCCGCTGATTCTTGGTGCAC TTCTCAGTGCACAGGCAGATTCGTTGGATGAGATGCTCTTGGGAAGATTCCTTGTTGGCA TTGGAATTGGCATAAATACAGTGCTCGTTCCACTATATGTCTCCGAGGTTGCTCCAACAA AATACAGGGGTTCTTTGGGGACTCTATGTCAGATCGGAACATGTTTGGGAATAATCGCTG CATTCTCATTGGGAATACCATCTGAAAGTGACCCACATTGGTGGCGGACAATGCTTTATG CTGCATGTGTACCTGGTGTTCTTATTGTTGCTGGAATGCAATTTGCTGTTGAGAGTCCCC GCTGGCTTGCCAAGGTTGGAAGAATAGATGATGCCAGAAATGTTGTAGAACATGTTTGGG GACCTTCTGAAGTTGAGAAGTCCATGGAAGAGATCCAATCTGTTGTTGCAAATGATGATT CGCAGGCTAGCTGGTCAGAACTTCTGGAAGAACCCCACAATAGAGTTGCACTGATTGGAG GGTCCCTTTTCTTTCTGCAACAGTTTGCTGGCATAAATGGCGTTCTGTACTTCTCATCAT TAACATTCCGTGATGTTGGTATTACCAGTGGTATCTTGGCAAGCCTATATGTTGGAATAA CTAATTTTGCAGGGGCAATTGTTGCTTCAATTTTGATGGATAAGCAAGGTCGAAAGAAAC TCTTGACAGGAAGCTATCTTGGAATGGCACTTGCAATGTTCCTAATAGTATATGCCATTA GCTTCCCCCTTGATGAAGGAGTTAGCCATGGCCTGTCAATTACTGGAACTCTGTTGTACA TATTTACATTCGCCATTGGAGCCGGACCAGTTACAGGAATCATCATACCAGAGCTGAGTG GTGCTCGGACACGCTCGAAAGTTATGGGCTTCAGCTTCACTGTACATTGGATATGCAATT TTCTGGTGGGACTGTATTTCCTGGAGCTTGCGAAGAAGTTAGGCGTTGGAGCCGTCTATG CAGGTTTTGGTGGAGTATCCTTGTTGTCAGCACTTTTCGCCTACAATTTCATTGTCGAGA CGAAAGGACGTTCTCTTGAGGAAATCGAAATGTCTCTGAGCCCTGCTGCCCCTGGCAAGC GAGAGTGAGACACATTCTTTCATTCACTTACGCAGATGGACCAAGCATTCAACTGCTCCA AGGAGTTTTTGATCCATGGGGTACTGGAATTCCAGATTGTTGTTCTAATGATCCAACCTG CTTGTCAGTGCATATAGTGGTTATGTAGAAGCAGTAGCCATCCAGCAGATCCATGTTGTC ACCTTACTTGTGTAGTTATATAACCATGTATATAATGGATCACATTACTGAAGAACACAC ACCTCAGGTTGTTAATAGGGCAAGCAGTTGAAGTAACCATGCAAATAAAGAGTAGAGAAT TGCCATTG