Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0394300-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:13631743:13640237:-1 gene:Os09g0394300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glycoside hydrolase OsGH9B11 description:Glycoside hydrolase, family 9 protein. (Os09t0394300-01)
Sequence	ATGGCCTTCACCGTCACCATGCTCTCCTGGGGCGCCATCGACTTCGCCGCCGACATCGCC GCCGCCGGCGAGTGGCGCCACGCCCTCGAGGCCATCAAGTGGGGCACCGACTACTTCGTC AAGGCCCACACCCACCCCTTCGTCTACTGGGCCGAGGTGGGCGACGGCGACACGGACCAC TACTGCTGGCAGCGGCCGGAGGACATGACGACGTCGAGGCAGGCCTACCGCGTGGACAGG GACAACCCGGGGTCGGACCTCGCCGGCGAGACGGCGGCGGCGCTCGCGGCGGCGTCCATC GTGTTCCGCCGCTCCGACCCGCACTACTCCCACCTCCTCCTCCACCACGCCCAGCAGCTG TTCGAGTTCGGGGACACCTACAGGGGCAGCTACGACAGCAGCATCGAGGAGGTCCGGAGC TACTACGCGTCGGTCAGCGGCTACCACGACGAGCTCCTGTGGGCGGCGCTCTGGCTCCAC CGCGCCACGGGCAAGGAGGAGTACCTCCGCTACGCCGTCGACAACGCCGACTCCTTCGGC GGCGTCGGCTGGGCCATCACCGAGTTCAGCTGGGACGTCAAGTACGCCGGCCTCCAGGTC CTCGCCGCCAAGCTGCTGCTGGACGGCGACCCGCAGGCGGCGGCGCACCGCGGCGTGCTG GAGAAGTACAGGGAGAAGGCGGAGCACTACCTGTGCGCGTGCCTCGGCCGCAACATCAAC GGCGCCGACAACGTCGACCGGAGCCCCGGCGGGATGCTCTACGTCCGCCAATGGAACAAC CTCCAGTACGCCTCCAGCGCCGCCTTCCTCCTCACCGCCTACTCCCACTACCTCTCCTCC TCCTCCGCCTCCGCCTCCGCGGCCCTCCGCTGCCCCGGCGGCGCGGCGGCGGCGGCGGAG ATGGTGTCGCTGGCGAGGTCGCAGGCGGACTACATCCTGGGGCGGAACCCGCTGCGGCTG AGCTACATGGTGGGGTACGGCCGCCGGTACCCCGCCCGGGTGCACCACCGCGGCGCCTCC ATCGTGTCCCACAAGGAGGACGGCCGCTTCATCGGGTGCGTGCAGGGGTTCGACGACTGG TTCGGCCGCGGCCGCGCCAACCCCAACGTGCTCGCCGGCGCCATCGTCGGCGGGCCCAGC CGCCGCGACGAGTTCCGCGACGACCGCGCCAACTACATGCAGACCGAGGCCTGCACCTAC AACACCGCCCCCATGGTCGCCGTCTTCGCCAGGCTACACCGCCTCACCACCGCCATCACC ACGGCGGCCGCGGCGGAGGATCCCGACGGCGGCTCGCCGGATCGGAGGAGTGTAGATAGA AGGTAG

Peptide Sequence

PEP ID	Os09t0394300-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:13631743:13640237:-1 gene:Os09g0394300 transcript:Os09t0394300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glycoside hydrolase OsGH9B11 description:Glycoside hydrolase, family 9 protein. (Os09t0394300-01)
Sequence	MAFTVTMLSWGAIDFAADIAAAGEWRHALEAIKWGTDYFVKAHTHPFVYWAEVGDGDTDH YCWQRPEDMTTSRQAYRVDRDNPGSDLAGETAAALAAASIVFRRSDPHYSHLLLHHAQQL FEFGDTYRGSYDSSIEEVRSYYASVSGYHDELLWAALWLHRATGKEEYLRYAVDNADSFG GVGWAITEFSWDVKYAGLQVLAAKLLLDGDPQAAAHRGVLEKYREKAEHYLCACLGRNIN GADNVDRSPGGMLYVRQWNNLQYASSAAFLLTAYSHYLSSSSASASAALRCPGGAAAAAE MVSLARSQADYILGRNPLRLSYMVGYGRRYPARVHHRGASIVSHKEDGRFIGCVQGFDDW FGRGRANPNVLAGAIVGGPSRRDEFRDDRANYMQTEACTYNTAPMVAVFARLHRLTTAIT TAAAAEDPDGGSPDRRSVDRR

Transcript Sequence

Transcript ID	Os09t0394300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:13631743:13640237:-1 gene:Os09g0394300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glycoside hydrolase OsGH9B11 description:Glycoside hydrolase, family 9 protein. (Os09t0394300-01)
Sequence	CCATGGCCTTCACCGTCACCATGCTCTCCTGGGGCGCCATCGACTTCGCCGCCGACATCG CCGCCGCCGGCGAGTGGCGCCACGCCCTCGAGGCCATCAAGTGGGGCACCGACTACTTCG TCAAGGCCCACACCCACCCCTTCGTCTACTGGGCCGAGGTGGGCGACGGCGACACGGACC ACTACTGCTGGCAGCGGCCGGAGGACATGACGACGTCGAGGCAGGCCTACCGCGTGGACA GGGACAACCCGGGGTCGGACCTCGCCGGCGAGACGGCGGCGGCGCTCGCGGCGGCGTCCA TCGTGTTCCGCCGCTCCGACCCGCACTACTCCCACCTCCTCCTCCACCACGCCCAGCAGC TGTTCGAGTTCGGGGACACCTACAGGGGCAGCTACGACAGCAGCATCGAGGAGGTCCGGA GCTACTACGCGTCGGTCAGCGGCTACCACGACGAGCTCCTGTGGGCGGCGCTCTGGCTCC ACCGCGCCACGGGCAAGGAGGAGTACCTCCGCTACGCCGTCGACAACGCCGACTCCTTCG GCGGCGTCGGCTGGGCCATCACCGAGTTCAGCTGGGACGTCAAGTACGCCGGCCTCCAGG TCCTCGCCGCCAAGCTGCTGCTGGACGGCGACCCGCAGGCGGCGGCGCACCGCGGCGTGC TGGAGAAGTACAGGGAGAAGGCGGAGCACTACCTGTGCGCGTGCCTCGGCCGCAACATCA ACGGCGCCGACAACGTCGACCGGAGCCCCGGCGGGATGCTCTACGTCCGCCAATGGAACA ACCTCCAGTACGCCTCCAGCGCCGCCTTCCTCCTCACCGCCTACTCCCACTACCTCTCCT CCTCCTCCGCCTCCGCCTCCGCGGCCCTCCGCTGCCCCGGCGGCGCGGCGGCGGCGGCGG AGATGGTGTCGCTGGCGAGGTCGCAGGCGGACTACATCCTGGGGCGGAACCCGCTGCGGC TGAGCTACATGGTGGGGTACGGCCGCCGGTACCCCGCCCGGGTGCACCACCGCGGCGCCT CCATCGTGTCCCACAAGGAGGACGGCCGCTTCATCGGGTGCGTGCAGGGGTTCGACGACT GGTTCGGCCGCGGCCGCGCCAACCCCAACGTGCTCGCCGGCGCCATCGTCGGCGGGCCCA GCCGCCGCGACGAGTTCCGCGACGACCGCGCCAACTACATGCAGACCGAGGCCTGCACCT ACAACACCGCCCCCATGGTCGCCGTCTTCGCCAGGCTACACCGCCTCACCACCGCCATCA CCACGGCGGCCGCGGCGGAGGATCCCGACGGCGGCTCGCCGGATCGGAGGAGTGTAGATA GAAGGTAGTGGTGGTGGTGGTGGTTTTAATTTGGGCGGGAAAAATTCTTTTTTCTTTTCT CGTATACTTTGCCTTCTTTTCTGCTTAAAAACTTCACTAAATTTTTTTGAAGTGTTAATA TGAGAGAGAGAGAGGTAAAGAGAGGGGATTTGATTATTATTATTATTATTAGTGAAAAAG AAACAAGAAAAAGATAGTGGATGGGTGTTATAATTAAGGAGGAGATGAAGGTGAAAATTA GTTACTTGTATTTTTGAGGTTAGGTCTAAGAAGTCAGAACTGAAC