Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0392000-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:13553673:13558013:1 gene:Os09g0392000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to mRNA, clone: RTFL01-05-M08. (Os09t0392000-01)
Sequence	ATGGCGGCCGCGCGCCACCGCGGCGGGGGCACCCACGCCGCCCCCCTACTCCTCGTCGTC CTCCTCCTGCTTTCCATGGGGCGGCTGCCGCGTGCCGCGGCGGTGGGGCTTGGGGGTGGC CTGGGGGAGCTGATGACGAAGGTGCCGTTCAGCCCCGGCGACGTGCTCCCGGTCCTGCCG AGGCAGGTGTCGTGGCCCGTGATGAACACGCTCCACAGCGCCGTCGACCTGCTGCCTTCC TTCGTCGCCGCCGTGGCCCCCGGGGCGGCCCCCTCCGACGCGGCGTGGAGCGGCGCCTGC TTCGCCCGGAACGAGGCCGCGCTCGAGCTCACCCCCGGAGATCGCAACGGGACCGAGCTG AGCGGCGCCGTGCTCCGACTCAAGACTGCTTCAGCTAAGAGTTGGACATGCATGGATCTC TATGTGTTTGCAACACCATATAGGATAACATGGGATTACTATTTTGCTGCTCGAGAACAC ACTTTGGAGATTAAATCATGGGAAGAAGAAGCGGAACTGGAATATGTGAAGCAACACGGC ATCTCTGTTTTTCTCATGCCATCTGGGATGCTTGGAACTTTGTTATCTTTGATTGATGTC CTACCTTTGTTTTCCAATACTGGTTGGGGTCAACATTCCAACTTGGCCTTTTTGGAGAAG CATATGGGAGCTTCATTTGAGAAACGTTCTCAGCCTTGGGTTACTACTATTAGGAAGGAG GATATACATTCTGGTGATTTTTTGGCTCTATCGAAGATACGAGGACGCTGGGGTGCATTT GAGACACTAGAGAAATGGGTGACTGGTGCGTTTGCTGGGCACACCGCAGTTTGCTTGAAA GATGAGAAGGGTGAAGTTTGGGTTGCGGAATCAGGCTTTGAAAATGAAAAGGGAGAAGAA ATTATTGTTATAGTTCCTTGGGATGAATGGTGGGCAATGGCACTCAAGGATTCGTCAAAT CCTCAGATAGCCCTTCTACCACTACATCCTGATGTACGGGCCAGATTCAATGAAAGTGCA GCATGGGACTATGCTCGAAGCATGGTTGGAAAGCCTTATGGCTATCATAACATGATATTT AGCTGGATTGATACAATCGGAGACAATTATCCACCTCCTCTTGATGCAAACCTGGTGATG GCTGTTATGTCAATGTGGACTAGGTTACAACCGCTTTATGCTGCAAACATGTGGAATGAA GCCCTTAACAAACGACTTGGGACTGAGGGGTTGGACCTTCATGGGATCATTGTTGAAACT GAAAGACGTGGGATGTCTTTTGATCAGTTGCTCACCATCCCTGAGCAAGATGAATGGGTT TACAGTGATGGTAAATCTACAACATGTGTTGCCTTTATTCTTGCAATGTACAAGGAGGCT GGAATATTCACGCCTTTTGCAGAGTCGATTCAGGTGACCGAGTTCACTATACGCGACGCG TACATGCTCAAGATTTTCGAAGATAACCAGGCCAGACTTCCAAGCTGGTGCAACACAGAA TCTGACAAGCTCCCCTTCTGCCAGATCCTGGGGGAGTACAGGATGGAGCTACCGGAGTAC AACACAATAGAACCGTATGCCAAAATGAATGAGAACTGCCCATCTTTACCCCCAACGTAC AAGCGGCCAGCGCGTTGCTGA

Peptide Sequence

PEP ID	Os09t0392000-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:13553673:13558013:1 gene:Os09g0392000 transcript:Os09t0392000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to mRNA, clone: RTFL01-05-M08. (Os09t0392000-01)
Sequence	MAAARHRGGGTHAAPLLLVVLLLLSMGRLPRAAAVGLGGGLGELMTKVPFSPGDVLPVLP RQVSWPVMNTLHSAVDLLPSFVAAVAPGAAPSDAAWSGACFARNEAALELTPGDRNGTEL SGAVLRLKTASAKSWTCMDLYVFATPYRITWDYYFAAREHTLEIKSWEEEAELEYVKQHG ISVFLMPSGMLGTLLSLIDVLPLFSNTGWGQHSNLAFLEKHMGASFEKRSQPWVTTIRKE DIHSGDFLALSKIRGRWGAFETLEKWVTGAFAGHTAVCLKDEKGEVWVAESGFENEKGEE IIVIVPWDEWWAMALKDSSNPQIALLPLHPDVRARFNESAAWDYARSMVGKPYGYHNMIF SWIDTIGDNYPPPLDANLVMAVMSMWTRLQPLYAANMWNEALNKRLGTEGLDLHGIIVET ERRGMSFDQLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFTPFAESIQVTEFTIRDA YMLKIFEDNQARLPSWCNTESDKLPFCQILGEYRMELPEYNTIEPYAKMNENCPSLPPTY KRPARC

Transcript Sequence

Transcript ID	Os09t0392000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:13553673:13558013:1 gene:Os09g0392000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to mRNA, clone: RTFL01-05-M08. (Os09t0392000-01)
Sequence	GAAAGCTCTCGCCGCGATCGCCAGCGCGACCAACGAGACTCCACGCCACGCCACGCCACC GCAACCCCCCTTTCCCCCACCGCGCAAGCCTCCTCCCCCCCGGAAAAAGTCGCCGCGACC GCCGCCGCGATGGCGGCCGCGCGCCACCGCGGCGGGGGCACCCACGCCGCCCCCCTACTC CTCGTCGTCCTCCTCCTGCTTTCCATGGGGCGGCTGCCGCGTGCCGCGGCGGTGGGGCTT GGGGGTGGCCTGGGGGAGCTGATGACGAAGGTGCCGTTCAGCCCCGGCGACGTGCTCCCG GTCCTGCCGAGGCAGGTGTCGTGGCCCGTGATGAACACGCTCCACAGCGCCGTCGACCTG CTGCCTTCCTTCGTCGCCGCCGTGGCCCCCGGGGCGGCCCCCTCCGACGCGGCGTGGAGC GGCGCCTGCTTCGCCCGGAACGAGGCCGCGCTCGAGCTCACCCCCGGAGATCGCAACGGG ACCGAGCTGAGCGGCGCCGTGCTCCGACTCAAGACTGCTTCAGCTAAGAGTTGGACATGC ATGGATCTCTATGTGTTTGCAACACCATATAGGATAACATGGGATTACTATTTTGCTGCT CGAGAACACACTTTGGAGATTAAATCATGGGAAGAAGAAGCGGAACTGGAATATGTGAAG CAACACGGCATCTCTGTTTTTCTCATGCCATCTGGGATGCTTGGAACTTTGTTATCTTTG ATTGATGTCCTACCTTTGTTTTCCAATACTGGTTGGGGTCAACATTCCAACTTGGCCTTT TTGGAGAAGCATATGGGAGCTTCATTTGAGAAACGTTCTCAGCCTTGGGTTACTACTATT AGGAAGGAGGATATACATTCTGGTGATTTTTTGGCTCTATCGAAGATACGAGGACGCTGG GGTGCATTTGAGACACTAGAGAAATGGGTGACTGGTGCGTTTGCTGGGCACACCGCAGTT TGCTTGAAAGATGAGAAGGGTGAAGTTTGGGTTGCGGAATCAGGCTTTGAAAATGAAAAG GGAGAAGAAATTATTGTTATAGTTCCTTGGGATGAATGGTGGGCAATGGCACTCAAGGAT TCGTCAAATCCTCAGATAGCCCTTCTACCACTACATCCTGATGTACGGGCCAGATTCAAT GAAAGTGCAGCATGGGACTATGCTCGAAGCATGGTTGGAAAGCCTTATGGCTATCATAAC ATGATATTTAGCTGGATTGATACAATCGGAGACAATTATCCACCTCCTCTTGATGCAAAC CTGGTGATGGCTGTTATGTCAATGTGGACTAGGTTACAACCGCTTTATGCTGCAAACATG TGGAATGAAGCCCTTAACAAACGACTTGGGACTGAGGGGTTGGACCTTCATGGGATCATT GTTGAAACTGAAAGACGTGGGATGTCTTTTGATCAGTTGCTCACCATCCCTGAGCAAGAT GAATGGGTTTACAGTGATGGTAAATCTACAACATGTGTTGCCTTTATTCTTGCAATGTAC AAGGAGGCTGGAATATTCACGCCTTTTGCAGAGTCGATTCAGGTGACCGAGTTCACTATA CGCGACGCGTACATGCTCAAGATTTTCGAAGATAACCAGGCCAGACTTCCAAGCTGGTGC AACACAGAATCTGACAAGCTCCCCTTCTGCCAGATCCTGGGGGAGTACAGGATGGAGCTA CCGGAGTACAACACAATAGAACCGTATGCCAAAATGAATGAGAACTGCCCATCTTTACCC CCAACGTACAAGCGGCCAGCGCGTTGCTGACACTGTGCCCCCACAACTGAAAGTAGGATG TTGTTTGAAAGTTTATCATGTAAGTAAATCATATTGTATATAGGTGTTTGATAGATCGCA GTTTTCACACGTAAGGAAGGTGACCCTCAGGTTTCTGCCTGTTACGAGAGCTGTTCTTGA GCTCAGGCATCCAATATGAAGGACTGACCTGTCTAAGAATTTGCTCACAACACAGAACTT TGAAATGATATCTACTGAAAAACTGGCTCTG