Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0388400-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:13319823:13325701:1 gene:Os09g0388400 gene_biotype:protein_coding transcript_biotype:protein_coding description:HAD superfamily hydrolase-like, type 3 domain containing protein. (Os09t0388400-01)
Sequence	ATGGCGCACCAGAGGCAGAGAGACACGAGCAGCGAGGAGGAGCTCCCACGTGAGCCGTGG ACGGTGGAGAAGGACGTCCACCTCCTCAACAACTTAGCCGCGCATGGCGGCGAGTTCCAA CGCGAGCCGTGGGTGGAGAAGGACGACGCCGCGTCGTGGACGGTGGAGAAAGACGACGTC CCGCTCGTCAACAACATCGTCGCGCACGGCGATCCCGAGGGCAGTTCGAACTCGCTCGCC CGATCAGGAGGACATTTGGCCAATGTCCACGAGGGAGCCGGCATGTTTTATCAGCCCAAC TTCAAGTACATTTTCTGTGATATGGATGGCACACTGCTGGATAGTAGCGGTCTAGTTCCA GAAACCAACGCTGAGGCCATTAGGGTGGCCAGGTCAAGAGGGGTACAAACAATCATTGCG ACAGGAAAGTCCCGCCCTGCTGTTATTGAAGTTCTTGGCAAGGTTAATTTAGCTGGCACA GGTGGTATCGTTTCAGAATCGTCTCCAGGAGTATTTCTTCAGGGTTTGTTAGTTTACGGC GAGGGGGGCCAAAAGTTATATCAACAGAATTTAGATATAGAAGTGTGCAGAGAGGCGCTT CTATACTCTCTGAAGCACAGAGTTGCCCTGGTGGCCTTCAGCCAGGACGACTGCTACACA ACGCTTGATGATCATCCTCTGGTGGACTTTTTCCATGTTATGTACCACGAACCAAAGGCA AAGATAATATCAGATGTTGACCATTTTCTGAGTACCATTGACATACAGAAGTTTGTGTTC CTAGAAACTCCTGAAGTGATCTCTTCTGTGCTGAGGCCACACTGGGCGAGGAGGGTTGAT GGAAAGGCACAGGTCGTTCAGGCACAGGGTGATGTGCTTGAAGTTGTACCGCTCGGGACT TCCAAAGGAAATGGGGTAAAAATTCTGTTGGAATCACTTTGTGCTAGTCCAGATGAGGTC ATGGCACTAGGCGATGGAAAAAACGATAAAGAGATGCTCCAACTTGCCGGCCTTGGTGTC GCCCTCTGCAACGGCTGTGAGGTGACAAAGGTGGTAGCCGACGTCATCGGCGCGAGCAAC GACGAAAGCGGCGTGGCACAGGCCATTTACAAATACCTCTAG

Peptide Sequence

PEP ID	Os09t0388400-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:13319823:13325701:1 gene:Os09g0388400 transcript:Os09t0388400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:HAD superfamily hydrolase-like, type 3 domain containing protein. (Os09t0388400-01)
Sequence	MAHQRQRDTSSEEELPREPWTVEKDVHLLNNLAAHGGEFQREPWVEKDDAASWTVEKDDV PLVNNIVAHGDPEGSSNSLARSGGHLANVHEGAGMFYQPNFKYIFCDMDGTLLDSSGLVP ETNAEAIRVARSRGVQTIIATGKSRPAVIEVLGKVNLAGTGGIVSESSPGVFLQGLLVYG EGGQKLYQQNLDIEVCREALLYSLKHRVALVAFSQDDCYTTLDDHPLVDFFHVMYHEPKA KIISDVDHFLSTIDIQKFVFLETPEVISSVLRPHWARRVDGKAQVVQAQGDVLEVVPLGT SKGNGVKILLESLCASPDEVMALGDGKNDKEMLQLAGLGVALCNGCEVTKVVADVIGASN DESGVAQAIYKYL

Transcript Sequence

Transcript ID	Os09t0388400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:13319823:13325701:1 gene:Os09g0388400 gene_biotype:protein_coding transcript_biotype:protein_coding description:HAD superfamily hydrolase-like, type 3 domain containing protein. (Os09t0388400-01)
Sequence	ATTCAGACATGGCGCACCAGAGGCAGAGAGACACGAGCAGCGAGGAGGAGCTCCCACGTG AGCCGTGGACGGTGGAGAAGGACGTCCACCTCCTCAACAACTTAGCCGCGCATGGCGGCG AGTTCCAACGCGAGCCGTGGGTGGAGAAGGACGACGCCGCGTCGTGGACGGTGGAGAAAG ACGACGTCCCGCTCGTCAACAACATCGTCGCGCACGGCGATCCCGAGGGCAGTTCGAACT CGCTCGCCCGATCAGGAGGACATTTGGCCAATGTCCACGAGGGAGCCGGCATGTTTTATC AGCCCAACTTCAAGTACATTTTCTGTGATATGGATGGCACACTGCTGGATAGTAGCGGTC TAGTTCCAGAAACCAACGCTGAGGCCATTAGGGTGGCCAGGTCAAGAGGGGTACAAACAA TCATTGCGACAGGAAAGTCCCGCCCTGCTGTTATTGAAGTTCTTGGCAAGGTTAATTTAG CTGGCACAGGTGGTATCGTTTCAGAATCGTCTCCAGGAGTATTTCTTCAGGGTTTGTTAG TTTACGGCGAGGGGGGCCAAAAGTTATATCAACAGAATTTAGATATAGAAGTGTGCAGAG AGGCGCTTCTATACTCTCTGAAGCACAGAGTTGCCCTGGTGGCCTTCAGCCAGGACGACT GCTACACAACGCTTGATGATCATCCTCTGGTGGACTTTTTCCATGTTATGTACCACGAAC CAAAGGCAAAGATAATATCAGATGTTGACCATTTTCTGAGTACCATTGACATACAGAAGT TTGTGTTCCTAGAAACTCCTGAAGTGATCTCTTCTGTGCTGAGGCCACACTGGGCGAGGA GGGTTGATGGAAAGGCACAGGTCGTTCAGGCACAGGGTGATGTGCTTGAAGTTGTACCGC TCGGGACTTCCAAAGGAAATGGGGTAAAAATTCTGTTGGAATCACTTTGTGCTAGTCCAG ATGAGGTCATGGCACTAGGCGATGGAAAAAACGATAAAGAGATGCTCCAACTTGCCGGCC TTGGTGTCGCCCTCTGCAACGGCTGTGAGGTGACAAAGGTGGTAGCCGACGTCATCGGCG CGAGCAACGACGAAAGCGGCGTGGCACAGGCCATTTACAAATACCTCTAGAAAATGATTC CACCTAGCTGGCTTAGCATTTCTACTGTGGTGTGGTAGGGCCTAATATATCTTGCTTGCA GCATCCATTTGCAAGCGTACCATATTTAAACTTCAATAATTGTACGTGGAAGTTGGAAGT ACTATTCGCTGGTGGATTAATATCATATTTGCTGCTTACAGCT