Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0386400-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:13174453:13178163:-1 gene:Os09g0386400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome component region PCI domain containing protein. (Os09t0386400-01)
Sequence	ATGGCGGCGTACCTGAGCATGGGAGAGGCGCACCGCCGCATCGCCGACTACCTCTCCCGC GTGGCGGACTCCGTCTCCTCGTCGGACGGCGCCGCGCTCGCCTCCCTCCTCGCCGTCTCC TCCGCGCAGGCCCCCGCCCCGCTCTCCGACGCGCTCTCCGCCTTCCCGGACTTCCCGCGC CTCGCCGCCGACCGCTACCCGCACCTCTCCGACCTCCTCCCCCCGCTCCTCCGCGCCATC CACTCCCACTCCCTCCGCCGCTTCGCCGACGCCTACTCCTCCTTCGAGAAGGCCGCCAAC GCGTTCTTGCAGGAGTTCCGGAACTGGGAGACGCCGTGGGCGATGGAGGCGATGCACACG GTGGCGCTTGAGATCAGGCTGCTGGCTGAGAAGGCAGATAGGGAGCTTGCAACGAGTGGG AAGAACCCTGACAAGCTGCAGTCTGCTGGGTCCTTCCTGATGAAGGTTTTCGGTGCACTC GCGGTTAAAGGGCCTAAACGCATTGGAGCACTCTATGTTACCTGCCAGCTATTTAAAATT TACTTCAGACTTGGAACAGTTCACCTTTGTCGCAGTGTCATAAGAAGTATTGAAACTGCC AGGAATTTTGATTTTGAAGATTTTCCAGTGAAAGATAAGGTCACTTATATGTATTATACC GGCAGATTAGAGGTGTTTAATGAGAACTTTCTTGTTGCAGATCAGAAGCTAACTTATGCT TTGGTGCACTGTAATCCTCAGTATGAGTCAAATTTGAGGAGAATTTTGAAGTTTCTTATC CCAGTAAAGCTTTCAATAGGTGTTTTGCCAAGAATAACACTACTGGAGAGGTACAATCTG CTTGAGTATGCAGATGTTGTGACCTCACTTAAGAGAGGAGATCTCAGGCTTCTTAGGCAA GCACTCGAAAGGCATGAAGACCAATTCTTAAAATCTGGTGTCTACCTTGTATTGGAGAAG CTTGAACTTCAAGTCTATCAGAGATTAGTTAAGAAAATCCATATCATTCAGAGGCAGAAG GAGCCAGCCAAGGCACATCAAATTAAGCTAGAAGTCGTTGTAAAAGCTTTGAAATGGCTT GAAATTGACATGGACGTGGATGAGGTGGAGTGCATCATGGCGTGCCTAATATACAAGAAT CTCATTAAAGGATACTTTGCTCATAAGAGCAAAGTTCTTGTCCTCAGCAAACAAGATCCT TTCCCAAAGTTGAATGGGAAGCCTGTCTAG

Peptide Sequence

PEP ID	Os09t0386400-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:13174453:13178163:-1 gene:Os09g0386400 transcript:Os09t0386400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome component region PCI domain containing protein. (Os09t0386400-01)
Sequence	MAAYLSMGEAHRRIADYLSRVADSVSSSDGAALASLLAVSSAQAPAPLSDALSAFPDFPR LAADRYPHLSDLLPPLLRAIHSHSLRRFADAYSSFEKAANAFLQEFRNWETPWAMEAMHT VALEIRLLAEKADRELATSGKNPDKLQSAGSFLMKVFGALAVKGPKRIGALYVTCQLFKI YFRLGTVHLCRSVIRSIETARNFDFEDFPVKDKVTYMYYTGRLEVFNENFLVADQKLTYA LVHCNPQYESNLRRILKFLIPVKLSIGVLPRITLLERYNLLEYADVVTSLKRGDLRLLRQ ALERHEDQFLKSGVYLVLEKLELQVYQRLVKKIHIIQRQKEPAKAHQIKLEVVVKALKWL EIDMDVDEVECIMACLIYKNLIKGYFAHKSKVLVLSKQDPFPKLNGKPV

Transcript Sequence

Transcript ID	Os09t0386400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:13174453:13178163:-1 gene:Os09g0386400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome component region PCI domain containing protein. (Os09t0386400-01)
Sequence	ATCTGATATCGCTTCCAAAAACCAAAACTACCCCCAAGCATCGATTTCCCATCCGACGGC CAGGATCGGCGATCGTCACCACCCTTCAGAAATCAGAAACCGCCCTTCTTCGGGTCCGAC TCCGACGCCATCGCCGCCGCCGCCGCCGCCGAAACCACGAACCCTACCCCCCGGCGGCGC CGCAGCCGCCGCGCCGGAGATGGCGGCGTACCTGAGCATGGGAGAGGCGCACCGCCGCAT CGCCGACTACCTCTCCCGCGTGGCGGACTCCGTCTCCTCGTCGGACGGCGCCGCGCTCGC CTCCCTCCTCGCCGTCTCCTCCGCGCAGGCCCCCGCCCCGCTCTCCGACGCGCTCTCCGC CTTCCCGGACTTCCCGCGCCTCGCCGCCGACCGCTACCCGCACCTCTCCGACCTCCTCCC CCCGCTCCTCCGCGCCATCCACTCCCACTCCCTCCGCCGCTTCGCCGACGCCTACTCCTC CTTCGAGAAGGCCGCCAACGCGTTCTTGCAGGAGTTCCGGAACTGGGAGACGCCGTGGGC GATGGAGGCGATGCACACGGTGGCGCTTGAGATCAGGCTGCTGGCTGAGAAGGCAGATAG GGAGCTTGCAACGAGTGGGAAGAACCCTGACAAGCTGCAGTCTGCTGGGTCCTTCCTGAT GAAGGTTTTCGGTGCACTCGCGGTTAAAGGGCCTAAACGCATTGGAGCACTCTATGTTAC CTGCCAGCTATTTAAAATTTACTTCAGACTTGGAACAGTTCACCTTTGTCGCAGTGTCAT AAGAAGTATTGAAACTGCCAGGAATTTTGATTTTGAAGATTTTCCAGTGAAAGATAAGGT CACTTATATGTATTATACCGGCAGATTAGAGGTGTTTAATGAGAACTTTCTTGTTGCAGA TCAGAAGCTAACTTATGCTTTGGTGCACTGTAATCCTCAGTATGAGTCAAATTTGAGGAG AATTTTGAAGTTTCTTATCCCAGTAAAGCTTTCAATAGGTGTTTTGCCAAGAATAACACT ACTGGAGAGGTACAATCTGCTTGAGTATGCAGATGTTGTGACCTCACTTAAGAGAGGAGA TCTCAGGCTTCTTAGGCAAGCACTCGAAAGGCATGAAGACCAATTCTTAAAATCTGGTGT CTACCTTGTATTGGAGAAGCTTGAACTTCAAGTCTATCAGAGATTAGTTAAGAAAATCCA TATCATTCAGAGGCAGAAGGAGCCAGCCAAGGCACATCAAATTAAGCTAGAAGTCGTTGT AAAAGCTTTGAAATGGCTTGAAATTGACATGGACGTGGATGAGGTGGAGTGCATCATGGC GTGCCTAATATACAAGAATCTCATTAAAGGATACTTTGCTCATAAGAGCAAAGTTCTTGT CCTCAGCAAACAAGATCCTTTCCCAAAGTTGAATGGGAAGCCTGTCTAGTTCATAGTCGC CCCTGAAAAGAATTAACTATCTCCTATTCTGTTGTATTCGGCACATGTTTTTGTAAAACG TTGAAAAACTATTGCCTGACAGTAACATTTGTATTATTGTAAC