Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0386200-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:13164154:13166287:-1 gene:Os09g0386200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 18, U-box protein 18 description:Armadillo-like helical domain containing protein. (Os09t0386200-01)
Sequence	ATGGGTGCGGGCCGCCCTCGCCGCTGGAAGCTGCCGTTCCACCGCAGCGCGCCGTCGTCT CCCTCCTCCCCGCCGGACCCCGAGCCCCACTCGCCTGCGCGTTCGGCGGTTGTTGTTGTT GCGGAGGAAGAAGCGCCTCCGGCCGAGTTCGTGTGCTCGATCCTGGGCGCGCTCATGGCC GACCCGGTGATCCTCCCGTCGGGGCAGACGTACGAGCGCGCCTGCCTCCAGGCCTGCGCG GAGCTCGCGTTCCTGCCGCCCGGGATGGGGTCCGCCTCCGACGCGGTGATACCCAACGCG GCGCTCAAGGCGGCGATTGGGACCTGGTGCGCGCGCTCCGGTAGGGTGGTGCCGGCGCCG CCGTCGGCCGATGCTGCTCGGGAGGCCGTGCTCCGCGCGATGCCGGCCGATGCGGCGAAG TCGGTGAGGACCCGGCGGGCGGCGCTGGCGAGCTCGTCCAATTCGTCCTACTCGTCGCCG GCGTCCGCCGCGTCGACGTCGTCGTACACGTCTTCGTCGGAGATTATTCCGGCGGAGGAC GAGGTTGGTGTGAAGCCCGTGAAGGAGGGGACAAACAAGGATGCGGTCCGGGAGCAGGTG GAGATGGCGGTTGATCCGCTCGAGGACGTGGTGGTTGCCAAGGTGATGGATGCGGAGGAG GAGGAGGAGGTGGTCTTGGCCGTTGCCGGCCTCCGGGAGGCCACGCGGGAGAGCGCGGAG CGGCGGCGCGCGCTCTGCACGCCGCGGATGCTCGGCGCGCTCCGCCGCGTGCTGCTCATC CCGCGCCACGCCAGCGCTCGTGTCGACGCGACGGCCGCGCTGGTGAACCTCACGCTCGAG CCGGCGAACAAGGTGCGCATCGTCCGCGCGGGCGCCGTGCCGCCGCTCGTCGAGGTGCTC CGCTCGAGCACGTCGCCGCCGGAGGCCCGTGAGCACGCGGCCGGCGCGCTCTTCGGCCTC GCCCTGAACGAGGACAACCGCGCCGCCATCGGCGTGCTCGGCGCGGTGCCTCCCCTCCTC GACCTGCTCACCTCCCCCGCCCACGCCGCGCCCGCGCGCCGCGACGCCGGGATGGCGCTC TACCACCTCTCCCTCGCCGCCGTCAACCAGTCCAAGATCGCCCGCTTCCCGGGCGCGCCC AAGGCTCTCCTCGCCGTCGCGTCCAGCGCCGCCGAGCGGATGCCCATCCGTAGGCTGGCG CTCATGGTCGTCTGCAACGTGGCCGCCTGCACGGAGGGCCGCGCGGCGCTGATGGACGCG GGCGCCGTGGCGGCCGTCACCGCCATCCTCTCCCACGACACCCGCAGCGCCGAGCTCGAC GAGTGGTGCGTCGCGGCGATGTACGCCATGAGCCGTGGCAGCCTCCGGTTCCGCGGCCTC GCGCGCGCCGCCGGCGCGGACGCGGCCCTCCGCCGCGTCGCCGAGGAGTGCGCCCCGGGC ATCGTGCGGCGCGACATGGCGAGGAAGACGCTCCGGGCCATGCGGAACGAGGCCGACGAC GCGGCCGACCTGACCGGCAGCAGCCTCGAGTGCGGCGACGGCGACGACTGCGCCGGGAGC ATCGTGTCCGACGGCCTCATGTCCTTCCGCCGCCGGCAGCGCGAGCTCGGGTCCTCGTCG TGCGGCAACACGGCCGAATTCTAA

Peptide Sequence

PEP ID	Os09t0386200-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:13164154:13166287:-1 gene:Os09g0386200 transcript:Os09t0386200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 18, U-box protein 18 description:Armadillo-like helical domain containing protein. (Os09t0386200-01)
Sequence	MGAGRPRRWKLPFHRSAPSSPSSPPDPEPHSPARSAVVVVAEEEAPPAEFVCSILGALMA DPVILPSGQTYERACLQACAELAFLPPGMGSASDAVIPNAALKAAIGTWCARSGRVVPAP PSADAAREAVLRAMPADAAKSVRTRRAALASSSNSSYSSPASAASTSSYTSSSEIIPAED EVGVKPVKEGTNKDAVREQVEMAVDPLEDVVVAKVMDAEEEEEVVLAVAGLREATRESAE RRRALCTPRMLGALRRVLLIPRHASARVDATAALVNLTLEPANKVRIVRAGAVPPLVEVL RSSTSPPEAREHAAGALFGLALNEDNRAAIGVLGAVPPLLDLLTSPAHAAPARRDAGMAL YHLSLAAVNQSKIARFPGAPKALLAVASSAAERMPIRRLALMVVCNVAACTEGRAALMDA GAVAAVTAILSHDTRSAELDEWCVAAMYAMSRGSLRFRGLARAAGADAALRRVAEECAPG IVRRDMARKTLRAMRNEADDAADLTGSSLECGDGDDCAGSIVSDGLMSFRRRQRELGSSS CGNTAEF

Transcript Sequence

Transcript ID	Os09t0386200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:13164154:13166287:-1 gene:Os09g0386200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 18, U-box protein 18 description:Armadillo-like helical domain containing protein. (Os09t0386200-01)
Sequence	GAGACCCAATGGCCGCCACAGCAAAAGCATCACTACCTCCACCTCCTAGCTCCTCTAGCT CCTCCTCCCCTCGCCGCCACCGCCGCCGCTGAACACCACCCCCGCAGCCGCGCGCGCGTT TCATGGGTGCGGGCCGCCCTCGCCGCTGGAAGCTGCCGTTCCACCGCAGCGCGCCGTCGT CTCCCTCCTCCCCGCCGGACCCCGAGCCCCACTCGCCTGCGCGTTCGGCGGTTGTTGTTG TTGCGGAGGAAGAAGCGCCTCCGGCCGAGTTCGTGTGCTCGATCCTGGGCGCGCTCATGG CCGACCCGGTGATCCTCCCGTCGGGGCAGACGTACGAGCGCGCCTGCCTCCAGGCCTGCG CGGAGCTCGCGTTCCTGCCGCCCGGGATGGGGTCCGCCTCCGACGCGGTGATACCCAACG CGGCGCTCAAGGCGGCGATTGGGACCTGGTGCGCGCGCTCCGGTAGGGTGGTGCCGGCGC CGCCGTCGGCCGATGCTGCTCGGGAGGCCGTGCTCCGCGCGATGCCGGCCGATGCGGCGA AGTCGGTGAGGACCCGGCGGGCGGCGCTGGCGAGCTCGTCCAATTCGTCCTACTCGTCGC CGGCGTCCGCCGCGTCGACGTCGTCGTACACGTCTTCGTCGGAGATTATTCCGGCGGAGG ACGAGGTTGGTGTGAAGCCCGTGAAGGAGGGGACAAACAAGGATGCGGTCCGGGAGCAGG TGGAGATGGCGGTTGATCCGCTCGAGGACGTGGTGGTTGCCAAGGTGATGGATGCGGAGG AGGAGGAGGAGGTGGTCTTGGCCGTTGCCGGCCTCCGGGAGGCCACGCGGGAGAGCGCGG AGCGGCGGCGCGCGCTCTGCACGCCGCGGATGCTCGGCGCGCTCCGCCGCGTGCTGCTCA TCCCGCGCCACGCCAGCGCTCGTGTCGACGCGACGGCCGCGCTGGTGAACCTCACGCTCG AGCCGGCGAACAAGGTGCGCATCGTCCGCGCGGGCGCCGTGCCGCCGCTCGTCGAGGTGC TCCGCTCGAGCACGTCGCCGCCGGAGGCCCGTGAGCACGCGGCCGGCGCGCTCTTCGGCC TCGCCCTGAACGAGGACAACCGCGCCGCCATCGGCGTGCTCGGCGCGGTGCCTCCCCTCC TCGACCTGCTCACCTCCCCCGCCCACGCCGCGCCCGCGCGCCGCGACGCCGGGATGGCGC TCTACCACCTCTCCCTCGCCGCCGTCAACCAGTCCAAGATCGCCCGCTTCCCGGGCGCGC CCAAGGCTCTCCTCGCCGTCGCGTCCAGCGCCGCCGAGCGGATGCCCATCCGTAGGCTGG CGCTCATGGTCGTCTGCAACGTGGCCGCCTGCACGGAGGGCCGCGCGGCGCTGATGGACG CGGGCGCCGTGGCGGCCGTCACCGCCATCCTCTCCCACGACACCCGCAGCGCCGAGCTCG ACGAGTGGTGCGTCGCGGCGATGTACGCCATGAGCCGTGGCAGCCTCCGGTTCCGCGGCC TCGCGCGCGCCGCCGGCGCGGACGCGGCCCTCCGCCGCGTCGCCGAGGAGTGCGCCCCGG GCATCGTGCGGCGCGACATGGCGAGGAAGACGCTCCGGGCCATGCGGAACGAGGCCGACG ACGCGGCCGACCTGACCGGCAGCAGCCTCGAGTGCGGCGACGGCGACGACTGCGCCGGGA GCATCGTGTCCGACGGCCTCATGTCCTTCCGCCGCCGGCAGCGCGAGCTCGGGTCCTCGT CGTGCGGCAACACGGCCGAATTCTAAACCACCACCACCACCACCACCGTGTGATTGATTG ATTCCACCGAATACCTAGTACACCATTAGACAGTTGAGGCAATTAGGTACGCGGATTGCG ACAGCTGCCATCGCTGGTCGACGCCGGCGAGGTCGCCATGGCGGCGGCGGCGCCGGCGAG CTCCCATGTGTAGTGCACTTTGTGCTCGGATGTGTAAAGTTGACAGGGCTCGCGACGCGC GTGTGGCGGGTGTTGCTTGCAAGCCAGAGTAATGGCATTGTTCTGTGTGTACTTTCCAAA CTTAGGCATTGTTCAGGAAGAAAGACGCATGTGTCTGAAATTCTTCTGAATTTCTGCATC TGTAAATAAGATCAAAATCCTTTTGCTCCGATCC