Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0385700-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:13155093:13155832:-1 gene:Os09g0385700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:STRESS ASSOCIATED PROTEIN GENE 17 description:Zinc finger, AN1-type domain containing protein. (Os09t0385700-01)
Sequence

ATGGCGCGGCGGGGCACGGAGGCGTTCCCGGACCTGGGGGCGCAGTGCGACAGGGAGGAC
TGCAACCAGCTCGACTTCCTCCCCTTCGACTGCGACGGCTGCGGCAAGACGTTCTGCGCG
GAGCACCGGACGTACCGGGACCACGGCTGCGCGCGCGCCGCGGACCAGGGCCGCACCGTC
GTCGTCTGCGAGGCCTGCGGCGACGCCATCGAGCGGCGGGCCGGGGACGGGGGCGGGGAC
GACGCCGCCGTGCTGGAGGCGCACGCGCGGTCGCGGCGGTGCGACCCGGCGAGGAAGCGC
AAGCCGCGGTGCCCCGTGCCGCGGTGCAAGGAGACGCTCACGTTCTCCAACACGAGCGGG
TGCAAGGGGTGCGGCCAGAAGGTGTGCCTCAAGCACCGGTTCCCCGCCGACCACGCGTGC
GCCGGCGCAGGCGCCGGCGCGGCGTCGAAGGCCGCCGGCGCCGCGGCCGCCGCGAGGAGC
GCCGGGCAGTGCGGGCGCGACGCGCAGAAGAAGGAGGGCGGCGGGTGGAAGCTGCCGCAA
TCGGTGAGGAACATGAAGATTTTCTGA

Peptide Sequence

PEP ID

Os09t0385700-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:13155093:13155832:-1 gene:Os09g0385700 transcript:Os09t0385700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:STRESS ASSOCIATED PROTEIN GENE 17 description:Zinc finger, AN1-type domain containing protein. (Os09t0385700-01)
Sequence

MARRGTEAFPDLGAQCDREDCNQLDFLPFDCDGCGKTFCAEHRTYRDHGCARAADQGRTV
VVCEACGDAIERRAGDGGGDDAAVLEAHARSRRCDPARKRKPRCPVPRCKETLTFSNTSG
CKGCGQKVCLKHRFPADHACAGAGAGAASKAAGAAAAARSAGQCGRDAQKKEGGGWKLPQ
SVRNMKIF

Transcript Sequence

Transcript ID

Os09t0385700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:13155093:13155832:-1 gene:Os09g0385700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:STRESS ASSOCIATED PROTEIN GENE 17 description:Zinc finger, AN1-type domain containing protein. (Os09t0385700-01)
Sequence

AGAGCTCTCGAGGAGGAGGAGGAAGGAATCATCAAGGCAACCGATCAAATCGTCGATCGA
TTTTCCATGGCGCGGCGGGGCACGGAGGCGTTCCCGGACCTGGGGGCGCAGTGCGACAGG
GAGGACTGCAACCAGCTCGACTTCCTCCCCTTCGACTGCGACGGCTGCGGCAAGACGTTC
TGCGCGGAGCACCGGACGTACCGGGACCACGGCTGCGCGCGCGCCGCGGACCAGGGCCGC
ACCGTCGTCGTCTGCGAGGCCTGCGGCGACGCCATCGAGCGGCGGGCCGGGGACGGGGGC
GGGGACGACGCCGCCGTGCTGGAGGCGCACGCGCGGTCGCGGCGGTGCGACCCGGCGAGG
AAGCGCAAGCCGCGGTGCCCCGTGCCGCGGTGCAAGGAGACGCTCACGTTCTCCAACACG
AGCGGGTGCAAGGGGTGCGGCCAGAAGGTGTGCCTCAAGCACCGGTTCCCCGCCGACCAC
GCGTGCGCCGGCGCAGGCGCCGGCGCGGCGTCGAAGGCCGCCGGCGCCGCGGCCGCCGCG
AGGAGCGCCGGGCAGTGCGGGCGCGACGCGCAGAAGAAGGAGGGCGGCGGGTGGAAGCTG
CCGCAATCGGTGAGGAACATGAAGATTTTCTGACTTGTCACGCCACGGTCGCCGGCGCAC
GCGGCGCGCCGCGGTTTCTTTCGTAGGAGGACAAGCAAAGAAAGTGCCAAAGAGCTTGCC
GAGGAGGCATTTGATCTGTC