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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0382400-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:12975278:12977293:-1 gene:Os09g0382400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PRIN2 description:Conserved hypothetical protein. (Os09t0382400-01)
Sequence

ATGGCGGCGAGGTTGTGGGCGGCGGCGGTGGCGCCGGCGACCTTAAACCCTCCTCTCCTC
ACTCTCTCCGCCTCCTCCTCGCCGTCGTCTTCTCGCCTCCGGCGTTCGGTTCTCGGACGC
CTGCGCAGCCGCGCCCCGCGCCCTGCCGATTTCGTGTGCCGCCGCGCCAAGAACGCGGCG
TACGACGACTACAAGTTCCCGGACCCCATCCCGGAGTTCGCCGCGCAGGAGACGAGCAAG
TTCAAGGAGCACATGATGTGGCGGCTGGAGCAGAAGAAGGATGACTACTTCGGGGAGCAC
GTGGAGGAAATCGTCGACGTCTGCACCGAGATACTAGGAACTTTCTTGGAGCATGATTAT
TGCGGACCTGGGACTCTCCTAGTTCACCCATTCTTGGACATGAAGGGTGAGATCAAAGAG
AGGGGGCTTCCTGGGGCACCTCAGGCTGCGCGTGCAGCGATTGCATGGGCTGAGAAGAAT
ATTGACAAGGACTGGAAGGCGTGGACCGGAGAATACTAG

Peptide Sequence

PEP ID

Os09t0382400-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:12975278:12977293:-1 gene:Os09g0382400 transcript:Os09t0382400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PRIN2 description:Conserved hypothetical protein. (Os09t0382400-01)
Sequence

MAARLWAAAVAPATLNPPLLTLSASSSPSSSRLRRSVLGRLRSRAPRPADFVCRRAKNAA
YDDYKFPDPIPEFAAQETSKFKEHMMWRLEQKKDDYFGEHVEEIVDVCTEILGTFLEHDY
CGPGTLLVHPFLDMKGEIKERGLPGAPQAARAAIAWAEKNIDKDWKAWTGEY

Transcript Sequence

Transcript ID

Os09t0382400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:12975278:12977293:-1 gene:Os09g0382400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PRIN2 description:Conserved hypothetical protein. (Os09t0382400-01)
Sequence

GTAACCCCCTCTCGAAGCGATAAGCCCCGTGGGAGAGACGAGCGCGCGCTCCGCTCCGAG
CAGAAATGGCGGCGAGGTTGTGGGCGGCGGCGGTGGCGCCGGCGACCTTAAACCCTCCTC
TCCTCACTCTCTCCGCCTCCTCCTCGCCGTCGTCTTCTCGCCTCCGGCGTTCGGTTCTCG
GACGCCTGCGCAGCCGCGCCCCGCGCCCTGCCGATTTCGTGTGCCGCCGCGCCAAGAACG
CGGCGTACGACGACTACAAGTTCCCGGACCCCATCCCGGAGTTCGCCGCGCAGGAGACGA
GCAAGTTCAAGGAGCACATGATGTGGCGGCTGGAGCAGAAGAAGGATGACTACTTCGGGG
AGCACGTGGAGGAAATCGTCGACGTCTGCACCGAGATACTAGGAACTTTCTTGGAGCATG
ATTATTGCGGACCTGGGACTCTCCTAGTTCACCCATTCTTGGACATGAAGGGTGAGATCA
AAGAGAGGGGGCTTCCTGGGGCACCTCAGGCTGCGCGTGCAGCGATTGCATGGGCTGAGA
AGAATATTGACAAGGACTGGAAGGCGTGGACCGGAGAATACTAGGCCTATTTTTTCCGCC
ATTTCTTCTGTTTGTTGTATGATGTATCAGCGGATGTATCACTAGTTTTGGTGTTTGAGT
AGAGGCTTGAATCTAGACTAGTCATGTTATCAGATCCAGAACTCACGCAATGCATTAATT
ATATCTTCTGATCCGATGGATCTTTGGTG