Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0381600-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:12913683:12914824:1 gene:Os09g0381600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0381600-01)
Sequence

ATGGGCAACTGCCAGGCGGCGGAGGCGGCGGCGGTCGTCATCCAGCACCCCGGCGGGAAG
GTGGAGCGGCTCTACTGGCCCACCACCGCCGCCGACGTCATGCGGGCCAACCCCGGCCAC
TACGTCGCCCTCGTCATCCTCCGCATCTCCGCCGACAAGGCCGCCTCCGCCGCCGCCGCG
GGGGACAACAAGACCAACGCCGGTGGAGCCACCGGCGGCGGCGGAGGCGGCGCCAAGATC
ACCAGGGTCAAGCTCCTCAAGCCCAAGGACACGCTCCTCCTCGGCCAGGTCTACCGCCTC
ATCACCTCCCAAGAGGTGACGAAGGCGCTGCGGGCGAGGAAGAACGAGAAGATGCGGCGG
TGCGAGGCCATCAGGCAGCAGCACGAGCAGCTCCGGCGAGGCGACCCGCTCGCTGGCGTA
GCCGAGGAGGAGGAGGAGGAGGAGAGCGCCTCCGACGATCAGGACGGGAAGAGGGACCGG
CACCGGAGCTCCGGCGCCGGCGCGCCGCCGGCCGCCGGCGGCAGAGGCCGGCACTGGCGG
CCGTCGCTGCAGAGCATCTCCGAGGCCGCGAGCCAGAGCGGCGGCGGCGGCGGCGGCAGC
AGCATCTCTGAATCCGCCGCAAGATGA

Peptide Sequence

PEP ID

Os09t0381600-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:12913683:12914824:1 gene:Os09g0381600 transcript:Os09t0381600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0381600-01)
Sequence

MGNCQAAEAAAVVIQHPGGKVERLYWPTTAADVMRANPGHYVALVILRISADKAASAAAA
GDNKTNAGGATGGGGGGAKITRVKLLKPKDTLLLGQVYRLITSQEVTKALRARKNEKMRR
CEAIRQQHEQLRRGDPLAGVAEEEEEEESASDDQDGKRDRHRSSGAGAPPAAGGRGRHWR
PSLQSISEAASQSGGGGGGSSISESAAR

Transcript Sequence

Transcript ID

Os09t0381600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:12913683:12914824:1 gene:Os09g0381600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0381600-01)
Sequence

ACCACCACCTCAAAACGGCAACTGCATGACCTCCACCACCTCCACCTCCTCCTCTTCACT
CCCAAGAACTCGCAATCGCCACCGCCGCCGCGGCGGCGCAGCTTGATACCGGCGGCGCGA
GAGGAAGGCGGAGGAGGGAGAGAGAAATGGGCAACTGCCAGGCGGCGGAGGCGGCGGCGG
TCGTCATCCAGCACCCCGGCGGGAAGGTGGAGCGGCTCTACTGGCCCACCACCGCCGCCG
ACGTCATGCGGGCCAACCCCGGCCACTACGTCGCCCTCGTCATCCTCCGCATCTCCGCCG
ACAAGGCCGCCTCCGCCGCCGCCGCGGGGGACAACAAGACCAACGCCGGTGGAGCCACCG
GCGGCGGCGGAGGCGGCGCCAAGATCACCAGGGTCAAGCTCCTCAAGCCCAAGGACACGC
TCCTCCTCGGCCAGGTCTACCGCCTCATCACCTCCCAAGAGGTGACGAAGGCGCTGCGGG
CGAGGAAGAACGAGAAGATGCGGCGGTGCGAGGCCATCAGGCAGCAGCACGAGCAGCTCC
GGCGAGGCGACCCGCTCGCTGGCGTAGCCGAGGAGGAGGAGGAGGAGGAGAGCGCCTCCG
ACGATCAGGACGGGAAGAGGGACCGGCACCGGAGCTCCGGCGCCGGCGCGCCGCCGGCCG
CCGGCGGCAGAGGCCGGCACTGGCGGCCGTCGCTGCAGAGCATCTCCGAGGCCGCGAGCC
AGAGCGGCGGCGGCGGCGGCGGCAGCAGCATCTCTGAATCCGCCGCAAGATGATTCCCCT
GTTTGGTGCTGTATTGTCTGGTTTTCTTTTCTTTTTTTTTCTTTCTTCTTCTTTTCTTTT
TTTTCTTTTCTCTCTTAGTATAAAGTGCTTGGAAGTTGGAACTACCTCCAAAAGAAAGCA
GAAAAAATTGTAAATCAGAGTAATCAGAGCAGGATCAATAGGAAGGAAAGCTTGTTTCAT
CTCTC