Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0381100-03
CDS Infomation

cds chromosome:IRGSP-1.0:9:12886839:12888446:1 gene:Os09g0381100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xanthine/uracil/vitamin C permease family protein. (Os09t0381100-01);Xanthine/uracil/vitamin C permease family protein. (Os09t0381100-02);Similar to Permease I. (Os09t0381100-03)
Sequence

CCTTATCCCTTTCAGTGGGGAGCTCCAACTTTTGATGCTGGTGAAGCCTTTGCAATGATG
ATGACTTCATTTATTGCTCTTGTGGAGACAACTGGAGCTTTCATTGCTGCTTCAAGGTAT
GCAAGCGCAACTATGATACCTCCATCAATCATTAGTCGGGGCATCGGTTGGCAGGGAATC
AGCATCTTGATTGATTCTTTTTTTGGGACGGCCAATGGAACCTCAGTTTCAGTGGAGAAT
GTTGGTTTACTCGCTTTGACACATGTTGGCAGCAGGAGAGTAGTGCAAATATCTGCTGGT
TTCATGATCTTCTTTGCTATCCTTGGAAAATTTGGAGCACTTTTCGCATCCATTCCATTG
CCTATATTTGCGGGCATGTACTGTATTTTCTTCGCTTATGTCGGTGCCTGTGGTTTGAGT
TTCCTTCAGTTTTGCAACCTAAACAGCTTCAGGACCAAATTCATCTTGGGTTTTGCTTTC
TTCATGGGGATCTCAGTTCCTCAGTACTTCAATGAGTACACAGCTGTTGCAGGTTATGGA
CCAGTGCACACTGGTGCCAGATGGTTCAATGATATGATAAACGTGCCGTTCTCGTCGAAG
CCGTTTGTCGCGGGTCTTGTGGCCTACTTCCTCGACAACACGATCGAGACGCACAATAAC
ACGGTGAGGAAGGATAGAGGCTACCATTGGTGGGACAAATTCAGGAGCTTCAAGAAAGAC
GCGAGGAGCGAAGAATTCTACTCGTTACCGTTCAATCTGAACAAGTTCTTCCCTGCTGTC
TGA

Peptide Sequence

PEP ID

Os09t0381100-03
PEP Infomation

pep chromosome:IRGSP-1.0:9:12886839:12888446:1 gene:Os09g0381100 transcript:Os09t0381100-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xanthine/uracil/vitamin C permease family protein. (Os09t0381100-01);Xanthine/uracil/vitamin C permease family protein. (Os09t0381100-02);Similar to Permease I. (Os09t0381100-03)
Sequence

PYPFQWGAPTFDAGEAFAMMMTSFIALVETTGAFIAASRYASATMIPPSIISRGIGWQGI
SILIDSFFGTANGTSVSVENVGLLALTHVGSRRVVQISAGFMIFFAILGKFGALFASIPL
PIFAGMYCIFFAYVGACGLSFLQFCNLNSFRTKFILGFAFFMGISVPQYFNEYTAVAGYG
PVHTGARWFNDMINVPFSSKPFVAGLVAYFLDNTIETHNNTVRKDRGYHWWDKFRSFKKD
ARSEEFYSLPFNLNKFFPAV

Transcript Sequence

Transcript ID

Os09t0381100-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:12886839:12888446:1 gene:Os09g0381100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xanthine/uracil/vitamin C permease family protein. (Os09t0381100-01);Xanthine/uracil/vitamin C permease family protein. (Os09t0381100-02);Similar to Permease I. (Os09t0381100-03)
Sequence

CCTTATCCCTTTCAGTGGGGAGCTCCAACTTTTGATGCTGGTGAAGCCTTTGCAATGATG
ATGACTTCATTTATTGCTCTTGTGGAGACAACTGGAGCTTTCATTGCTGCTTCAAGGTAT
GCAAGCGCAACTATGATACCTCCATCAATCATTAGTCGGGGCATCGGTTGGCAGGGAATC
AGCATCTTGATTGATTCTTTTTTTGGGACGGCCAATGGAACCTCAGTTTCAGTGGAGAAT
GTTGGTTTACTCGCTTTGACACATGTTGGCAGCAGGAGAGTAGTGCAAATATCTGCTGGT
TTCATGATCTTCTTTGCTATCCTTGGAAAATTTGGAGCACTTTTCGCATCCATTCCATTG
CCTATATTTGCGGGCATGTACTGTATTTTCTTCGCTTATGTCGGTGCCTGTGGTTTGAGT
TTCCTTCAGTTTTGCAACCTAAACAGCTTCAGGACCAAATTCATCTTGGGTTTTGCTTTC
TTCATGGGGATCTCAGTTCCTCAGTACTTCAATGAGTACACAGCTGTTGCAGGTTATGGA
CCAGTGCACACTGGTGCCAGATGGTTCAATGATATGATAAACGTGCCGTTCTCGTCGAAG
CCGTTTGTCGCGGGTCTTGTGGCCTACTTCCTCGACAACACGATCGAGACGCACAATAAC
ACGGTGAGGAAGGATAGAGGCTACCATTGGTGGGACAAATTCAGGAGCTTCAAGAAAGAC
GCGAGGAGCGAAGAATTCTACTCGTTACCGTTCAATCTGAACAAGTTCTTCCCTGCTGTC
TGAATGATCTAGCAAATGTCACCCAAGCAAAAATGGTTCATGTCTGAACATAATTCTGCT
GGCCTTCTTCAGTGTTGCTGTGCGTCAGTTTTGTGTACTTATAATAGGCGAATCTTACTA
ATTGGACAACGGAGATGTGCCTTAGAATGGGAATATCATGTCTATTTTTTTGTCCTACAA
TGATTTATGTGTCATTACCTAGGTCTTTCTCTT