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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0379400-00
CDS Infomation

cds chromosome:IRGSP-1.0:9:12777391:12778214:-1 gene:Os09g0379400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0096F13.5 protein. (Os09t0379400-00)
Sequence

ATGGCGCGCAGCTCCCCCACGTCGCCATCTTCCCGTTCATGGCCAGGGGGCACACCGTCC
CGCTCATCCACTTCGCTCACCTCCTCCGCCGCCGCGGCCTCGCCGCCGTCACCCTCTTCC
CGGACCACCATCTCCCCGGCGTTCGTCGAGGCGATGTCGGCGCTCCGCCCGCGGCTGGAG
GCGTCGCTCGCCGCCGCGCGGCCCCGCGTCGGCCTCCTCGTCGCCGACGCGCTCCTGTAC
TGGGCGCACGACGCCGCGGCGGGGCTCGGGGTCCCGACGGTGGCGTTCTACGCCACGAGC
ATGTTCGCGCACGTCATACGGGACGTGATCCTGCGTGACAATCCGGCCGCCGCGCTGGTG
GCTGGCGGCGCCGGCGCCACGTTCGCCGTGCCGGAGTTCCCGCACGTCCGGCTCACGCTC
ACCGACATCCCTGTCCCCTTCAACGACCCGTCGCCGGCGGGGCCGCTCATCGAGATGGAC
GCCAAGATGGCGAACGCCATCGCCGGTAGCCGCGGCCTCATCGTCAAGACGGCCTGGCCC
GTCGGCCCGCTCTGCCTGGCACGGCAGCCGTGCCGCGCCGCCGGCGACAGCGCTGCCGCC
ATCAAGCCGTCGTGGATGCGGTGGCTGGACGAGATGGCGGCCGCCGGGCGCGCCGTGCTG
TACGTCGCGCTCGGCACGCTCAACGCCGAGCCGCACGCGCAGCTTCGGGAGCTCGCCGGC
GGGCTGGAGGCGTCCGGCGTGGACTTCCTCTGGTAG

Peptide Sequence

PEP ID

Os09t0379400-00
PEP Infomation

pep chromosome:IRGSP-1.0:9:12777391:12778214:-1 gene:Os09g0379400 transcript:Os09t0379400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0096F13.5 protein. (Os09t0379400-00)
Sequence

MARSSPTSPSSRSWPGGTPSRSSTSLTSSAAAASPPSPSSRTTISPAFVEAMSALRPRLE
ASLAAARPRVGLLVADALLYWAHDAAAGLGVPTVAFYATSMFAHVIRDVILRDNPAAALV
AGGAGATFAVPEFPHVRLTLTDIPVPFNDPSPAGPLIEMDAKMANAIAGSRGLIVKTAWP
VGPLCLARQPCRAAGDSAAAIKPSWMRWLDEMAAAGRAVLYVALGTLNAEPHAQLRELAG
GLEASGVDFLW

Transcript Sequence

Transcript ID

Os09t0379400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:12777391:12778214:-1 gene:Os09g0379400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0096F13.5 protein. (Os09t0379400-00)
Sequence

ATGGCGCGCAGCTCCCCCACGTCGCCATCTTCCCGTTCATGGCCAGGGGGCACACCGTCC
CGCTCATCCACTTCGCTCACCTCCTCCGCCGCCGCGGCCTCGCCGCCGTCACCCTCTTCC
CGGACCACCATCTCCCCGGCGTTCGTCGAGGCGATGTCGGCGCTCCGCCCGCGGCTGGAG
GCGTCGCTCGCCGCCGCGCGGCCCCGCGTCGGCCTCCTCGTCGCCGACGCGCTCCTGTAC
TGGGCGCACGACGCCGCGGCGGGGCTCGGGGTCCCGACGGTGGCGTTCTACGCCACGAGC
ATGTTCGCGCACGTCATACGGGACGTGATCCTGCGTGACAATCCGGCCGCCGCGCTGGTG
GCTGGCGGCGCCGGCGCCACGTTCGCCGTGCCGGAGTTCCCGCACGTCCGGCTCACGCTC
ACCGACATCCCTGTCCCCTTCAACGACCCGTCGCCGGCGGGGCCGCTCATCGAGATGGAC
GCCAAGATGGCGAACGCCATCGCCGGTAGCCGCGGCCTCATCGTCAAGACGGCCTGGCCC
GTCGGCCCGCTCTGCCTGGCACGGCAGCCGTGCCGCGCCGCCGGCGACAGCGCTGCCGCC
ATCAAGCCGTCGTGGATGCGGTGGCTGGACGAGATGGCGGCCGCCGGGCGCGCCGTGCTG
TACGTCGCGCTCGGCACGCTCAACGCCGAGCCGCACGCGCAGCTTCGGGAGCTCGCCGGC
GGGCTGGAGGCGTCCGGCGTGGACTTCCTCTGGTAG