Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0378700-00
CDS Infomation	cds chromosome:IRGSP-1.0:9:12746529:12748883:1 gene:Os09g0378700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 6, U-box protein 6 description:Similar to ubiquitin-protein ligase. (Os09t0378700-00)
Sequence	ATGTCGTCGCCGCCGCCGCCGCCGCCGAGCAAGCCGAAGCGCCGGCGGCTACTGTCTCTT CCGGCGGTCTACCCGTGCGAGGACATCGCGCCGGCGCCGCTGCTCGCCTCGCTGCTCTCC CTCGCGGCGGATGTCGCCAGCCGTCGGGCGGCCGACGTCGACGCCTTCCCCGTTCTCCGC TGCGGCGTGCGCAAGGCCGTGCGGCTCGCCGGGATCCTCCTCGCGTTCCTCGAGGAGGTT CAGGATGCGGCGGCGGCGGCGGCGTTGCCGTCGTCTGCGGTGCTTGGGCTGACGGAGCTG CACGTGGCGATGCAGAAGCTGCGGTTCCTGCTCGCGGACTGCGCGCGGCGTGGCGCGCGG CTGTGGGTGCTCGTGAACGCCGGGATGGTGGCGTCGGAGCTCAGGTTGGTGCTCGGGTCG GTCGCGGCGGCCATGGACGCGCTTCCGAGGAGCGTCGCGGAGGCGTCGGTGGAGGCCGGG GAGCTCGCGCGGGTGGTGTCGGAGCAGGCGTGGCGCGCGGCGGTGCGGCCCGACGGCGCC GACGAGCGCGCGGCGCGGAGCGTGCGGTCGATCCTGGATCAGTTCAAGGACGGCGTCGCG CCGGACGCCGACGACGTGAGGCGGGTGCTCCGCCGGGTCAGGGTCGGGAGCTGGTCGGAT TGCTCCGAGGAGATCGCGTTCCTGGAGAGCGAGATTTGCGCGCGGCTGGACGCCGGCGAC GAGAACAGCAATGACGTTCTCGTCATGAACAGCTTAATGACGTTCCTGGTGTACTGCCGC GTCGTGCTGTTCGACCACATTGACGCGAGCAAGTCGCAACCGGCGGCGGCGGCAGCGCCG GCGCCGGCGAGGTGCCCGGAATGGATCAGACCGGAAGCGCTGCAGTGCCCGATCACTCTT GACCTCATGACCGATCCGGTGACCGTGTCCACCGGCCAGACATACGACCGGGCGTCGATC ACCCGGTGGATGAAGGCCGGTTGCCGCACGTGCCCGGTCACCGGCGAGAGGCTGAGCACC GCCGACCTCGTCCCCAACACCGTGCTCCGCGGGATCATCGAGCGGATGCTTCTCATCAAT GGCGTCACCCTCCCGGAGCTGAGCGCCGCCGGCGGCGGTGGCCACCGCCACGGCGCCGTC GCGAACACGGCCGTGCCGTTCGGCCCGGCCGCCGCGGGCGCCGCGCGCCTCGCCGTCGCG CACATCGTGGCGCAGCTCTCGAGGGGGTCGACGGAGGAGCGGAGGAAGGCGACGTCGGAG GCACGGAAGCTGTCGAAGCACAGCGTGTTCTACCGGGCTTGCCTCGTCGACGCCAACGCC GTGCCGTGGTTGCTGTGCCTCCTCTCCTCCACCGACGCCGCCGTGCAGGACAATGCCGTG GCGTCGCTGCTCAACCTCTCGAAGCACCCCGCCGGCAGGACGGCCATCGTGGAGGTCGGC GGCGTCGGCCTCGTCGTCGACGTGATCAACGTCGGCGCCAAGGCCGAGGCGCAGCACAAC GCGGCGGCCGTCCTCTTCTACCTCTCGTCGAACAGCCCGGACTCCGCCGAGGAGATCGGC CGCATCCCGGAGGCGATCCCGACGCTGGTCCAGCTCATCCGGGACGGCGCGTACCGCGGG CGGAAGAACGCCATGGTCAGCCTGTACGGGCTGCTCCAGAGCGCCGCCAACCACGGCAGG GCCATCGCCGCGGGCGCCGTGTCAGCGCTCGCCGCGCTGCTGCTCTCCGCCGACCGCGAC GACCTCGCCGGGGACAGCGTCGCGCTGCTGGCGAGGATCGCCGAGCAGCCGTCTGGCGCC GCGGCCGTCCTCTCGCAGCCGGGGCTCGTCGCCCGCCTCGCCGAGGCGCTCGCCGCGTCG TCGGCGTCGTCGTCCCGGTCGGCGAGAGACCACAGCGTGTCGCTCCTCGCCTCGCTGTGC CGGCACGGCGGCGCCAAGGTGGTCGCCGTGCTGGGGCGGATGCCGGGGCTGATGGCGTCG CTCTACTCGCTCGTCGCCGACGGCGGCAGCCCGCAGACGAGCAAGAAGGCGCGGGCGCTG CTCAACGAGATCCACCGGCATTACGAGGTGGCGCCGCCGCCGCCGGCGTCGTCGGCGTCG TCGGACGCCGGCGGTGACCGTGTCGTTCGCGTGCTATAG

Peptide Sequence

PEP ID	Os09t0378700-00
PEP Infomation	pep chromosome:IRGSP-1.0:9:12746529:12748883:1 gene:Os09g0378700 transcript:Os09t0378700-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 6, U-box protein 6 description:Similar to ubiquitin-protein ligase. (Os09t0378700-00)
Sequence	MSSPPPPPPSKPKRRRLLSLPAVYPCEDIAPAPLLASLLSLAADVASRRAADVDAFPVLR CGVRKAVRLAGILLAFLEEVQDAAAAAALPSSAVLGLTELHVAMQKLRFLLADCARRGAR LWVLVNAGMVASELRLVLGSVAAAMDALPRSVAEASVEAGELARVVSEQAWRAAVRPDGA DERAARSVRSILDQFKDGVAPDADDVRRVLRRVRVGSWSDCSEEIAFLESEICARLDAGD ENSNDVLVMNSLMTFLVYCRVVLFDHIDASKSQPAAAAAPAPARCPEWIRPEALQCPITL DLMTDPVTVSTGQTYDRASITRWMKAGCRTCPVTGERLSTADLVPNTVLRGIIERMLLIN GVTLPELSAAGGGGHRHGAVANTAVPFGPAAAGAARLAVAHIVAQLSRGSTEERRKATSE ARKLSKHSVFYRACLVDANAVPWLLCLLSSTDAAVQDNAVASLLNLSKHPAGRTAIVEVG GVGLVVDVINVGAKAEAQHNAAAVLFYLSSNSPDSAEEIGRIPEAIPTLVQLIRDGAYRG RKNAMVSLYGLLQSAANHGRAIAAGAVSALAALLLSADRDDLAGDSVALLARIAEQPSGA AAVLSQPGLVARLAEALAASSASSSRSARDHSVSLLASLCRHGGAKVVAVLGRMPGLMAS LYSLVADGGSPQTSKKARALLNEIHRHYEVAPPPPASSASSDAGGDRVVRVL

Transcript Sequence

Transcript ID	Os09t0378700-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:12746529:12748883:1 gene:Os09g0378700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 6, U-box protein 6 description:Similar to ubiquitin-protein ligase. (Os09t0378700-00)
Sequence	ATTTTACAGCCCACCTCGAAACTTCTCTTTACCATTTTATGCTCTCTCTCTTCCCCTCTC TCCCCGATGTCGTCGCCGCCGCCGCCGCCGCCGAGCAAGCCGAAGCGCCGGCGGCTACTG TCTCTTCCGGCGGTCTACCCGTGCGAGGACATCGCGCCGGCGCCGCTGCTCGCCTCGCTG CTCTCCCTCGCGGCGGATGTCGCCAGCCGTCGGGCGGCCGACGTCGACGCCTTCCCCGTT CTCCGCTGCGGCGTGCGCAAGGCCGTGCGGCTCGCCGGGATCCTCCTCGCGTTCCTCGAG GAGGTTCAGGATGCGGCGGCGGCGGCGGCGTTGCCGTCGTCTGCGGTGCTTGGGCTGACG GAGCTGCACGTGGCGATGCAGAAGCTGCGGTTCCTGCTCGCGGACTGCGCGCGGCGTGGC GCGCGGCTGTGGGTGCTCGTGAACGCCGGGATGGTGGCGTCGGAGCTCAGGTTGGTGCTC GGGTCGGTCGCGGCGGCCATGGACGCGCTTCCGAGGAGCGTCGCGGAGGCGTCGGTGGAG GCCGGGGAGCTCGCGCGGGTGGTGTCGGAGCAGGCGTGGCGCGCGGCGGTGCGGCCCGAC GGCGCCGACGAGCGCGCGGCGCGGAGCGTGCGGTCGATCCTGGATCAGTTCAAGGACGGC GTCGCGCCGGACGCCGACGACGTGAGGCGGGTGCTCCGCCGGGTCAGGGTCGGGAGCTGG TCGGATTGCTCCGAGGAGATCGCGTTCCTGGAGAGCGAGATTTGCGCGCGGCTGGACGCC GGCGACGAGAACAGCAATGACGTTCTCGTCATGAACAGCTTAATGACGTTCCTGGTGTAC TGCCGCGTCGTGCTGTTCGACCACATTGACGCGAGCAAGTCGCAACCGGCGGCGGCGGCA GCGCCGGCGCCGGCGAGGTGCCCGGAATGGATCAGACCGGAAGCGCTGCAGTGCCCGATC ACTCTTGACCTCATGACCGATCCGGTGACCGTGTCCACCGGCCAGACATACGACCGGGCG TCGATCACCCGGTGGATGAAGGCCGGTTGCCGCACGTGCCCGGTCACCGGCGAGAGGCTG AGCACCGCCGACCTCGTCCCCAACACCGTGCTCCGCGGGATCATCGAGCGGATGCTTCTC ATCAATGGCGTCACCCTCCCGGAGCTGAGCGCCGCCGGCGGCGGTGGCCACCGCCACGGC GCCGTCGCGAACACGGCCGTGCCGTTCGGCCCGGCCGCCGCGGGCGCCGCGCGCCTCGCC GTCGCGCACATCGTGGCGCAGCTCTCGAGGGGGTCGACGGAGGAGCGGAGGAAGGCGACG TCGGAGGCACGGAAGCTGTCGAAGCACAGCGTGTTCTACCGGGCTTGCCTCGTCGACGCC AACGCCGTGCCGTGGTTGCTGTGCCTCCTCTCCTCCACCGACGCCGCCGTGCAGGACAAT GCCGTGGCGTCGCTGCTCAACCTCTCGAAGCACCCCGCCGGCAGGACGGCCATCGTGGAG GTCGGCGGCGTCGGCCTCGTCGTCGACGTGATCAACGTCGGCGCCAAGGCCGAGGCGCAG CACAACGCGGCGGCCGTCCTCTTCTACCTCTCGTCGAACAGCCCGGACTCCGCCGAGGAG ATCGGCCGCATCCCGGAGGCGATCCCGACGCTGGTCCAGCTCATCCGGGACGGCGCGTAC CGCGGGCGGAAGAACGCCATGGTCAGCCTGTACGGGCTGCTCCAGAGCGCCGCCAACCAC GGCAGGGCCATCGCCGCGGGCGCCGTGTCAGCGCTCGCCGCGCTGCTGCTCTCCGCCGAC CGCGACGACCTCGCCGGGGACAGCGTCGCGCTGCTGGCGAGGATCGCCGAGCAGCCGTCT GGCGCCGCGGCCGTCCTCTCGCAGCCGGGGCTCGTCGCCCGCCTCGCCGAGGCGCTCGCC GCGTCGTCGGCGTCGTCGTCCCGGTCGGCGAGAGACCACAGCGTGTCGCTCCTCGCCTCG CTGTGCCGGCACGGCGGCGCCAAGGTGGTCGCCGTGCTGGGGCGGATGCCGGGGCTGATG GCGTCGCTCTACTCGCTCGTCGCCGACGGCGGCAGCCCGCAGACGAGCAAGAAGGCGCGG GCGCTGCTCAACGAGATCCACCGGCATTACGAGGTGGCGCCGCCGCCGCCGGCGTCGTCG GCGTCGTCGGACGCCGGCGGTGACCGTGTCGTTCGCGTGCTATAGCAGCGATCGACAAAC CACACAAACAAACACACGTAATTAAGTAGAGCATAATACAGTAGATCGTACATAGGACAT TGGTTTTTGTCACGATCTCGGCTCGCGTTTTAGAAGAGTCTTGATCGAATTTTGCGTCGC ACATACTCTGTTCCT