Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0378300-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:12730781:12735642:-1 gene:Os09g0378300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Leucyl-tRNA synthetase, cytoplasmic (EC 6.1.1.4) (Leucine--tRNA ligase) (LeuRS). (Os09t0378300-01)
Sequence	ATGTCGTCAAATCCTGATGGAGGCAGAAGTTTTGCTCGGAGAGATCAATTACTCAATATC CAATCAGATGTTCACAAGTTATGGGAGGAGGGCAAGGTTTTTGAGGCTGAACCTGGGAGT AAGCCACCAGGCCCTGGGGAAAAATTCTTTGGCAATTTTCCATACCCTTACATGAACGGC TTGCTACATTTGGGCCATGCCTTCTCATTGTCCAAGCTTGAGTTTGGTGCTGCATACCAT AGACTCCGTGGCTCAAATGTCCTTTTGCCTTTTGCTTTCCATTGTACGGGAATGCCCATC AAGGCCTCAGCAGATAAACTGTCAAGGGAGGCTCAACAATATGGATATCCTCCTGTGTTT CCTGAATTAGACTCAAGTATTGAAGTTGCTGATGATAGCCAGCCTGACCAGGGGGTTTCT GTTGCCCCAGATAAATTTAAGAGCAAGAAATCTAAGGCTGCTTCAAAGGTTGGCTTACAG AAGTTTCAGTGGGAGATCATGAGGGGGTTTGGATTGTCAGATGAAGAAATTGCTAAATTC CGGGACCCTTACCACTGGTTATCTTACTTCCCTCCATTGGCAAAGGAGGACCTCAAGGCC TTTGGCCTGGGTTGTGATTGGAGGAGGTCGTTCATAACTACTGACATGAACCCATTCTAT GATGCTTTTGTCCGGTGGCAGATGAGAAAGCTGAAGAAAATGGGCAAGGTTGTCAAAGAT ATGAGGTACACAATCTACTCTCCATTGGATGGCCAACCTTGTGCTGACCATGATCGAGCT TCAGGTGAAGGTGTACAGCCTCAGGAGTATGTGTTAATTAAAATGGAGGTGGTTCCACCT TTCCCACCCAACTTGAAGACCTTGGAAGGAAGGAAAGTTTATTTGGCAGCAGCTACCTTA AGACCCGAGACGATGTATGGGCAGACAAACTGTTGGGTATTACCTGATGGAAAATATGGT GCTTTTGAGATCAATGACACCGATGTCTTCGTTCTGACATCAAGGGCCGCCCTTAATCTT GCATACCAGGGTCTATCTAAGGTCCCAGAGAAGCCAACTTGCTTAGCTGAGCTATCTGGC AATGATCTGATTGGTTTGCCCTTAAAGTCCCCTCTTTCTTTTCATGACGTTATATACGCA CTTCCCATGCTCACTATCTTGACAGACAAAGGCACTGGCATTGTGACTAGTGTGCCAAGT GATTCTCCAGATGATTTCATGGCACTACAAGATTTAGTATCAAAGCCAGCTTTGAGACAA AAGTTTGGAGTCAAAGATGAGTGGGTTCTTCCATTTAAGATTATACCAATAATCAATATT CCTGAATTTGGAGATAAGTCAGCTGAGAAGGTGTGCCTTGATCTCAAGATTAAAAGCCAG AATGACAAGGAGAAACTTGCGGAAGCTAAAAGGATGACATATCTCAAAGGTTTTACTGAT GGAACAATGATTGTAGGGGAGTTCAATGGGAGAAAGGTTCAAGAAGCAAAGCCACTGATA AAGAAGCAGCTTTTGGAAGAAGGCACAGCGGTGCTGTATAGCGAGCCTGAGAAGAAAGTC ATGTCAAGATCTGGTGATGAGTGTGTTGTTGCTCTCACAGATCAGTGGTACATTACTTAT GGTGGGACTGAATGGAAGCAGAAGGCAGTCAAATGTTTGGAGAAGATGAATACATTCTCG GCAGAAACCCGTAATGGTTTTGAACACACATTAGGCTGGCTGAATCAGTGGGCTTGCTCT CGGTCTTTTGGCCTAGGTACTCGCATTCCATGGGATGAGCAGTTCCTCGTGGAATCTCTT TCTGATTCCACCCTCTATATGGCATATTACACAATTGCTCATCTTTTGCAAAATGGTAAC ATGTATGGTAAGGAAATATTTTCTATTAGACCAGAACAAATGACAGATGAAGTTTGGGAC TATGTGTTCTGTGATGGTCTGGCACCTACTACTGACATACCTCCAGCTCTCTTGAGTAAA ATGAAGCAAGAATTCGAGTATTGGTATCCCTTTGATATTCGGGTGTCTGGCAAGGATCTT ATCCAAAACCATCTGACATTCAGCATTTACAACCATACAGCACTTCTTCCGGAGCATCAT TGGCCCCGTGGCTTCCGTTGCAATGGGCATCTTATGCTTAATTCTGAGAAGATGTCCAAG TCCACAGGGAATTTCCGTACTCTTCGGCAGGCCATTGAAGAATTCTCTTCTGATGCCACT AGGTTTGCCCTTGCTGATGCTGGTGATGGTATGGATGATGCCAATTTTGTCTTTGAAACA GCAAATGCTGCTATTTTGAGGCTTACCAAAGAAATTGCATGGATGGAAGAGGTTATAGCT GCTGAATCTTCCCTTAGAACTGGACCTCCCTCTACTTATGCTGACCATGTGTTTGCTAAT GAGATTAACATTGCGGTGATCGAAACTGAGAAGAGCTACAATGCCTTCATGTTCAGAGAT GCCCTTAAGTTGGGGTTCTATGACTTACAATTGGCTAGAGACGAGTACAGACTTTCTTGT GGAGCAGCAGGCATGAATCGTGATTTGTTGTGGCGGTTTATGGAAGTTCAGACTAGGCTT ATCACCCCCATTTGCCCACACTATGCTGAGCATGTGTGGCAAAAGATCCTGAGGAAGGAA GGCTTTGCAATAAAAGCAGGCTGGCCAGTTGCAGGAAGCCCAGATCCTACTCTAAGAATT GCAAACAAATATTTACAGGACTCTATAGTTAAATTCAGGAAGCTGCTCCAGAAGCAAGAA TCCGGTTCCAAGAAGCCCAAGAAGGGAGCTGCTGCACCTCCTCCATCTGAGGAAAACAAG CTGACTGTTGGTCTGATCTATGTTAATGAACACTATTATGGATGGAAAGAGCAATGTCTG AGGGTGCTCCAGTCTAAATTTGACAGCCAAGCTCGGTCCTTTGCCCCTGATGAGGAGATT ACTGAAGCACTGAAGAATTGCTCCATCGGGCAGGAAACTAATTTCAAACAAGTCCAGAAG CTCTGCATGCCTTTCATCAAGTCGAAAAAGGATGAGGCCAAGAGTGTTGGGCCCCATGCT TTAAATCTGAAGCTTCCATTTGGTGAAATGAATGTTCTCGAGGAGAATTTGGAGTTGATC AAGAGGCAGGTAGGCCTTGACCATGTAGAGGTCTTGTCAGCTTCTGATGAAGCAACTCGT GCTAAGGCTGGTGCTCATGTTTCAATGTTGGACAAGACCCCGCCTTCTCCTGGTGAACCA GTAGCAATCTTCATCAGCAAGCAGGAGTTTGAAGCCCAGCACTGA

Peptide Sequence

PEP ID	Os09t0378300-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:12730781:12735642:-1 gene:Os09g0378300 transcript:Os09t0378300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Leucyl-tRNA synthetase, cytoplasmic (EC 6.1.1.4) (Leucine--tRNA ligase) (LeuRS). (Os09t0378300-01)
Sequence	MSSNPDGGRSFARRDQLLNIQSDVHKLWEEGKVFEAEPGSKPPGPGEKFFGNFPYPYMNG LLHLGHAFSLSKLEFGAAYHRLRGSNVLLPFAFHCTGMPIKASADKLSREAQQYGYPPVF PELDSSIEVADDSQPDQGVSVAPDKFKSKKSKAASKVGLQKFQWEIMRGFGLSDEEIAKF RDPYHWLSYFPPLAKEDLKAFGLGCDWRRSFITTDMNPFYDAFVRWQMRKLKKMGKVVKD MRYTIYSPLDGQPCADHDRASGEGVQPQEYVLIKMEVVPPFPPNLKTLEGRKVYLAAATL RPETMYGQTNCWVLPDGKYGAFEINDTDVFVLTSRAALNLAYQGLSKVPEKPTCLAELSG NDLIGLPLKSPLSFHDVIYALPMLTILTDKGTGIVTSVPSDSPDDFMALQDLVSKPALRQ KFGVKDEWVLPFKIIPIINIPEFGDKSAEKVCLDLKIKSQNDKEKLAEAKRMTYLKGFTD GTMIVGEFNGRKVQEAKPLIKKQLLEEGTAVLYSEPEKKVMSRSGDECVVALTDQWYITY GGTEWKQKAVKCLEKMNTFSAETRNGFEHTLGWLNQWACSRSFGLGTRIPWDEQFLVESL SDSTLYMAYYTIAHLLQNGNMYGKEIFSIRPEQMTDEVWDYVFCDGLAPTTDIPPALLSK MKQEFEYWYPFDIRVSGKDLIQNHLTFSIYNHTALLPEHHWPRGFRCNGHLMLNSEKMSK STGNFRTLRQAIEEFSSDATRFALADAGDGMDDANFVFETANAAILRLTKEIAWMEEVIA AESSLRTGPPSTYADHVFANEINIAVIETEKSYNAFMFRDALKLGFYDLQLARDEYRLSC GAAGMNRDLLWRFMEVQTRLITPICPHYAEHVWQKILRKEGFAIKAGWPVAGSPDPTLRI ANKYLQDSIVKFRKLLQKQESGSKKPKKGAAAPPPSEENKLTVGLIYVNEHYYGWKEQCL RVLQSKFDSQARSFAPDEEITEALKNCSIGQETNFKQVQKLCMPFIKSKKDEAKSVGPHA LNLKLPFGEMNVLEENLELIKRQVGLDHVEVLSASDEATRAKAGAHVSMLDKTPPSPGEP VAIFISKQEFEAQH

Transcript Sequence

Transcript ID	Os09t0378300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:12730781:12735642:-1 gene:Os09g0378300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Leucyl-tRNA synthetase, cytoplasmic (EC 6.1.1.4) (Leucine--tRNA ligase) (LeuRS). (Os09t0378300-01)
Sequence	AGGATAAACCGCTAATCCCCGTCGTCCTCCCTCTCCGCCGCCGCCGCCGCCGCCGCCCCT CTGCTGGCTTCCAACCTACTCTCCGCCGGCCTGAGGCTGCGGCTCCCCTGCCTGCGCGCC ACCGTCAGGAAAATGTCGTCAAATCCTGATGGAGGCAGAAGTTTTGCTCGGAGAGATCAA TTACTCAATATCCAATCAGATGTTCACAAGTTATGGGAGGAGGGCAAGGTTTTTGAGGCT GAACCTGGGAGTAAGCCACCAGGCCCTGGGGAAAAATTCTTTGGCAATTTTCCATACCCT TACATGAACGGCTTGCTACATTTGGGCCATGCCTTCTCATTGTCCAAGCTTGAGTTTGGT GCTGCATACCATAGACTCCGTGGCTCAAATGTCCTTTTGCCTTTTGCTTTCCATTGTACG GGAATGCCCATCAAGGCCTCAGCAGATAAACTGTCAAGGGAGGCTCAACAATATGGATAT CCTCCTGTGTTTCCTGAATTAGACTCAAGTATTGAAGTTGCTGATGATAGCCAGCCTGAC CAGGGGGTTTCTGTTGCCCCAGATAAATTTAAGAGCAAGAAATCTAAGGCTGCTTCAAAG GTTGGCTTACAGAAGTTTCAGTGGGAGATCATGAGGGGGTTTGGATTGTCAGATGAAGAA ATTGCTAAATTCCGGGACCCTTACCACTGGTTATCTTACTTCCCTCCATTGGCAAAGGAG GACCTCAAGGCCTTTGGCCTGGGTTGTGATTGGAGGAGGTCGTTCATAACTACTGACATG AACCCATTCTATGATGCTTTTGTCCGGTGGCAGATGAGAAAGCTGAAGAAAATGGGCAAG GTTGTCAAAGATATGAGGTACACAATCTACTCTCCATTGGATGGCCAACCTTGTGCTGAC CATGATCGAGCTTCAGGTGAAGGTGTACAGCCTCAGGAGTATGTGTTAATTAAAATGGAG GTGGTTCCACCTTTCCCACCCAACTTGAAGACCTTGGAAGGAAGGAAAGTTTATTTGGCA GCAGCTACCTTAAGACCCGAGACGATGTATGGGCAGACAAACTGTTGGGTATTACCTGAT GGAAAATATGGTGCTTTTGAGATCAATGACACCGATGTCTTCGTTCTGACATCAAGGGCC GCCCTTAATCTTGCATACCAGGGTCTATCTAAGGTCCCAGAGAAGCCAACTTGCTTAGCT GAGCTATCTGGCAATGATCTGATTGGTTTGCCCTTAAAGTCCCCTCTTTCTTTTCATGAC GTTATATACGCACTTCCCATGCTCACTATCTTGACAGACAAAGGCACTGGCATTGTGACT AGTGTGCCAAGTGATTCTCCAGATGATTTCATGGCACTACAAGATTTAGTATCAAAGCCA GCTTTGAGACAAAAGTTTGGAGTCAAAGATGAGTGGGTTCTTCCATTTAAGATTATACCA ATAATCAATATTCCTGAATTTGGAGATAAGTCAGCTGAGAAGGTGTGCCTTGATCTCAAG ATTAAAAGCCAGAATGACAAGGAGAAACTTGCGGAAGCTAAAAGGATGACATATCTCAAA GGTTTTACTGATGGAACAATGATTGTAGGGGAGTTCAATGGGAGAAAGGTTCAAGAAGCA AAGCCACTGATAAAGAAGCAGCTTTTGGAAGAAGGCACAGCGGTGCTGTATAGCGAGCCT GAGAAGAAAGTCATGTCAAGATCTGGTGATGAGTGTGTTGTTGCTCTCACAGATCAGTGG TACATTACTTATGGTGGGACTGAATGGAAGCAGAAGGCAGTCAAATGTTTGGAGAAGATG AATACATTCTCGGCAGAAACCCGTAATGGTTTTGAACACACATTAGGCTGGCTGAATCAG TGGGCTTGCTCTCGGTCTTTTGGCCTAGGTACTCGCATTCCATGGGATGAGCAGTTCCTC GTGGAATCTCTTTCTGATTCCACCCTCTATATGGCATATTACACAATTGCTCATCTTTTG CAAAATGGTAACATGTATGGTAAGGAAATATTTTCTATTAGACCAGAACAAATGACAGAT GAAGTTTGGGACTATGTGTTCTGTGATGGTCTGGCACCTACTACTGACATACCTCCAGCT CTCTTGAGTAAAATGAAGCAAGAATTCGAGTATTGGTATCCCTTTGATATTCGGGTGTCT GGCAAGGATCTTATCCAAAACCATCTGACATTCAGCATTTACAACCATACAGCACTTCTT CCGGAGCATCATTGGCCCCGTGGCTTCCGTTGCAATGGGCATCTTATGCTTAATTCTGAG AAGATGTCCAAGTCCACAGGGAATTTCCGTACTCTTCGGCAGGCCATTGAAGAATTCTCT TCTGATGCCACTAGGTTTGCCCTTGCTGATGCTGGTGATGGTATGGATGATGCCAATTTT GTCTTTGAAACAGCAAATGCTGCTATTTTGAGGCTTACCAAAGAAATTGCATGGATGGAA GAGGTTATAGCTGCTGAATCTTCCCTTAGAACTGGACCTCCCTCTACTTATGCTGACCAT GTGTTTGCTAATGAGATTAACATTGCGGTGATCGAAACTGAGAAGAGCTACAATGCCTTC ATGTTCAGAGATGCCCTTAAGTTGGGGTTCTATGACTTACAATTGGCTAGAGACGAGTAC AGACTTTCTTGTGGAGCAGCAGGCATGAATCGTGATTTGTTGTGGCGGTTTATGGAAGTT CAGACTAGGCTTATCACCCCCATTTGCCCACACTATGCTGAGCATGTGTGGCAAAAGATC CTGAGGAAGGAAGGCTTTGCAATAAAAGCAGGCTGGCCAGTTGCAGGAAGCCCAGATCCT ACTCTAAGAATTGCAAACAAATATTTACAGGACTCTATAGTTAAATTCAGGAAGCTGCTC CAGAAGCAAGAATCCGGTTCCAAGAAGCCCAAGAAGGGAGCTGCTGCACCTCCTCCATCT GAGGAAAACAAGCTGACTGTTGGTCTGATCTATGTTAATGAACACTATTATGGATGGAAA GAGCAATGTCTGAGGGTGCTCCAGTCTAAATTTGACAGCCAAGCTCGGTCCTTTGCCCCT GATGAGGAGATTACTGAAGCACTGAAGAATTGCTCCATCGGGCAGGAAACTAATTTCAAA CAAGTCCAGAAGCTCTGCATGCCTTTCATCAAGTCGAAAAAGGATGAGGCCAAGAGTGTT GGGCCCCATGCTTTAAATCTGAAGCTTCCATTTGGTGAAATGAATGTTCTCGAGGAGAAT TTGGAGTTGATCAAGAGGCAGGTAGGCCTTGACCATGTAGAGGTCTTGTCAGCTTCTGAT GAAGCAACTCGTGCTAAGGCTGGTGCTCATGTTTCAATGTTGGACAAGACCCCGCCTTCT CCTGGTGAACCAGTAGCAATCTTCATCAGCAAGCAGGAGTTTGAAGCCCAGCACTGAGCT TAAGTCGCAGAATGAATTGTTTACAGGAACTCTCGTGATATTTTTGTCATTTTCATGGAC ATATTAAACTGTTATATTAGCTTGCGGCTTCTGCAATACTGCAGTATTTGCGGAAAATGA ACAAATTTGTTCTTCCCTGTAACAGAGTGATGATCTTGCAATACTCCCATTTTGTAGAAT GTTTAAGCTACTTATTGTGTCACTTATTTGCAGTGCACTCGTTTTTAGTTAATAGCTAGT AACTTATTTGCATGAATTTTTTGGTCACAAATTTTAGCCTCTTCATTGTAAACATTCTGG AGACTTCCATGTTTATATGTGAACTAATACTTATTATCAGGGCTCCATC