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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0375900-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:12580283:12582418:1 gene:Os09g0375900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Hypoxia-Induced Gene Domain 1, Hypoxia-Induced Gene Domain Protein 1 description:Hypoxia induced protein conserved region family protein. (Os09t0375900-01)
Sequence

ATGGAGAAGAGCAGCACCGCCGCGGGAGGGAGGAGCAGCACGCCGCCGCCGCCGATGTAC
ACGGACGAGTTCGCGCTCGAGGGGAAGAAGCCCGTCAAGAACCCCTTCGTCCCCATCGGT
GCATTGGTCACTGCTGGTGTTCTGACGGCCGGCCTGATCAGCTTCCGATATGGCAACTCT
AAACTGGGTCAGAAACTGATGAGGGCTCGTGTGGTCGCTCAAGGAGCGACGGTTGCTCTG
ATGATCGGCAGTGCCTACTACTACGGTGATCAAATCAAGCTGTTCAAGAAAGGGTCAAGC
CCTTGA

Peptide Sequence

PEP ID

Os09t0375900-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:12580283:12582418:1 gene:Os09g0375900 transcript:Os09t0375900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Hypoxia-Induced Gene Domain 1, Hypoxia-Induced Gene Domain Protein 1 description:Hypoxia induced protein conserved region family protein. (Os09t0375900-01)
Sequence

MEKSSTAAGGRSSTPPPPMYTDEFALEGKKPVKNPFVPIGALVTAGVLTAGLISFRYGNS
KLGQKLMRARVVAQGATVALMIGSAYYYGDQIKLFKKGSSP

Transcript Sequence

Transcript ID

Os09t0375900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:12580283:12582418:1 gene:Os09g0375900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Hypoxia-Induced Gene Domain 1, Hypoxia-Induced Gene Domain Protein 1 description:Hypoxia induced protein conserved region family protein. (Os09t0375900-01)
Sequence

AAAGAAGAGAGAGAAAAAAAAAAGAAAATTCTCGAAGCGAATGGAGAAGAGCAGCACCGC
CGCGGGAGGGAGGAGCAGCACGCCGCCGCCGCCGATGTACACGGACGAGTTCGCGCTCGA
GGGGAAGAAGCCCGTCAAGAACCCCTTCGTCCCCATCGGTGCATTGGTCACTGCTGGTGT
TCTGACGGCCGGCCTGATCAGCTTCCGATATGGCAACTCTAAACTGGGTCAGAAACTGAT
GAGGGCTCGTGTGGTCGCTCAAGGAGCGACGGTTGCTCTGATGATCGGCAGTGCCTACTA
CTACGGTGATCAAATCAAGCTGTTCAAGAAAGGGTCAAGCCCTTGAAGACAAGTACAGGA
ATCTTCATATCTATACTTAGTTTTGGGCAAGATTACGCTGTTCATTGTTCCTCCAGCCAT
TGGGGTTTAACCATGTTGTTTTCGCCTGGCACGTGGTAGCTAACAAAAACAAGATCAGAT
TTGGATTTGCGCAATTACTAGGCTTTGAATAAAAAGCTTTTCTTTCGTCGACTTGACACC
AAGTTATGCATTGTATTGGAACACAGCACTGTTAATCGAGCGAATGGGTAAAATACATAC
ACAGTGCAGACCTGTGGCTTG