Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0375400-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:12558318:12561769:-1 gene:Os09g0375400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Appr>p cyclic nucleotide phosphodiesterase domain containing protein. (Os09t0375400-01)
Sequence	ATGGCGCAAGGCACCGCGCCCTCCGCCGGCGGCGGCGCCGCCGTCCCCACCCCCTCCGCC GCCGCGGCGGTCTCCACCACCACCACGACCCCCCCGGGCACCCCCCGCGCCACCGCCGCC TCCCCCCAGGCCGGGTACTACGCCGTCGAGCTCTACTTCGACCCGGCGCTGGAGAACCAG GTGCTCAAGGCGTGGAACGCGCTGGCGCGGCGGCAGCTGAGCAGCCGCCTCATCGACGCC GCCTCCCGCCCGCACCTCCCGCTGCTCCACCTCCCCGCCGCCTCGCTCCCGGACCCGCTC CGCCTCGCCCCCTCCCTCCGCGCGCTCGCCTCCCGCCTCGACCCGCTCCCGCTCGCGCTC TCCTCGCTGGCTTCCCCGCCGTCCTCGCCCGACGCCGGTGTCCTCTTCCTCGCCCCCACC CCGTCCGCCGCGCTGCTCGGCATCCACGCCCAGCTCTGCGAGCTCCTCCGCAAGGACGCC GGGGTGGAGGTCCCCGACGTGTTCCGCCCCGACCACTGGGTCCCCCGGTGCGCCGTCGCC GTCGACGTGCCCCGCGGGCGCATGGCCGAGGCCTTCTGCGTGCTCCGCGAGCTCAAGCTG CTGCCCGTCTCCGGGTACGGGATGGATATCGCGTTGGTGGAGGTCGGCCCGGTGGTGAGG GAGCTCGTGTCCTACCCTCTCGGCGGCAGCGGCGGCGCTGGAGCCGACTGA

Peptide Sequence

PEP ID	Os09t0375400-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:12558318:12561769:-1 gene:Os09g0375400 transcript:Os09t0375400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Appr>p cyclic nucleotide phosphodiesterase domain containing protein. (Os09t0375400-01)
Sequence	MAQGTAPSAGGGAAVPTPSAAAAVSTTTTTPPGTPRATAASPQAGYYAVELYFDPALENQ VLKAWNALARRQLSSRLIDAASRPHLPLLHLPAASLPDPLRLAPSLRALASRLDPLPLAL SSLASPPSSPDAGVLFLAPTPSAALLGIHAQLCELLRKDAGVEVPDVFRPDHWVPRCAVA VDVPRGRMAEAFCVLRELKLLPVSGYGMDIALVEVGPVVRELVSYPLGGSGGAGAD

Transcript Sequence

Transcript ID	Os09t0375400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:12558318:12561769:-1 gene:Os09g0375400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Appr>p cyclic nucleotide phosphodiesterase domain containing protein. (Os09t0375400-01)
Sequence	CTTTCCGACGATAAAAAAAAAAAAGCCCAAGTCTCGCCGCCGCCCCCCACATGGCGCAAG GCACCGCGCCCTCCGCCGGCGGCGGCGCCGCCGTCCCCACCCCCTCCGCCGCCGCGGCGG TCTCCACCACCACCACGACCCCCCCGGGCACCCCCCGCGCCACCGCCGCCTCCCCCCAGG CCGGGTACTACGCCGTCGAGCTCTACTTCGACCCGGCGCTGGAGAACCAGGTGCTCAAGG CGTGGAACGCGCTGGCGCGGCGGCAGCTGAGCAGCCGCCTCATCGACGCCGCCTCCCGCC CGCACCTCCCGCTGCTCCACCTCCCCGCCGCCTCGCTCCCGGACCCGCTCCGCCTCGCCC CCTCCCTCCGCGCGCTCGCCTCCCGCCTCGACCCGCTCCCGCTCGCGCTCTCCTCGCTGG CTTCCCCGCCGTCCTCGCCCGACGCCGGTGTCCTCTTCCTCGCCCCCACCCCGTCCGCCG CGCTGCTCGGCATCCACGCCCAGCTCTGCGAGCTCCTCCGCAAGGACGCCGGGGTGGAGG TCCCCGACGTGTTCCGCCCCGACCACTGGGTCCCCCGGTGCGCCGTCGCCGTCGACGTGC CCCGCGGGCGCATGGCCGAGGCCTTCTGCGTGCTCCGCGAGCTCAAGCTGCTGCCCGTCT CCGGGTACGGGATGGATATCGCGTTGGTGGAGGTCGGCCCGGTGGTGAGGGAGCTCGTGT CCTACCCTCTCGGCGGCAGCGGCGGCGCTGGAGCCGACTGAGAGGTGTTGTTAATCTGTA CAATTTGAAGAGCATCCTGGGTGGACAATCATATTTGACAAGGACATGATAATTATTTTC GTTGTCCTTTTTACCTGGTTCGGGGAACTAAACTGCAAAGAAGGCTAGATCATACTGTAT CCTAACACATACAGTATTTTTCTAATTATTTATTTAATCTTTTGGTTGATAATGTTCCCC CACAATTGTAGAGACCTGACAAATCATTACCAATTCAGGTTTGTTGTAATGCATTATCGA TTGTTG