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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0373000-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:12443393:12445866:-1 gene:Os09g0373000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Brain protein 44-like protein (PNAS-115). (Os09t0373000-01)
Sequence

ATGTCGACGGCGGTGAAGGCGTTCCTGAACAGCCCCGTCGGCCCCAAGACCACCCATTTC
TGGGGGCCCGTTGCTAACTGGGGCTTCGTCCTCGCGGGTTTGGTTGACATGAACAAACCT
CCTGAAATGATATCTGGCAATATGACAGCAGCCATGTGCGTGTATTCAGGACTCTTTATG
AGATTTGCCTGGATGGTACAACCACGGAACTATTTACTTTTAGCATGCCATGCTTCCAAT
GAATCGGTTCAGCTCTATCAGATGTCTCGGTGGGCTAGGGCACAGGGGTATTTGGAGAAA
AAGGAGCCAGAGGCTCAGCAGTAA

Peptide Sequence

PEP ID

Os09t0373000-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:12443393:12445866:-1 gene:Os09g0373000 transcript:Os09t0373000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Brain protein 44-like protein (PNAS-115). (Os09t0373000-01)
Sequence

MSTAVKAFLNSPVGPKTTHFWGPVANWGFVLAGLVDMNKPPEMISGNMTAAMCVYSGLFM
RFAWMVQPRNYLLLACHASNESVQLYQMSRWARAQGYLEKKEPEAQQ

Transcript Sequence

Transcript ID

Os09t0373000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:12443393:12445866:-1 gene:Os09g0373000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Brain protein 44-like protein (PNAS-115). (Os09t0373000-01)
Sequence

ATCTTCTCTCAACCCCTCGCCGCCTCCCGACCTCGACGACGACGACGACCGACGACGAGG
TGCGGCTGAATTTGCTGGAGGATTGATTGATTGGCCATGTCGACGGCGGTGAAGGCGTTC
CTGAACAGCCCCGTCGGCCCCAAGACCACCCATTTCTGGGGGCCCGTTGCTAACTGGGGC
TTCGTCCTCGCGGGTTTGGTTGACATGAACAAACCTCCTGAAATGATATCTGGCAATATG
ACAGCAGCCATGTGCGTGTATTCAGGACTCTTTATGAGATTTGCCTGGATGGTACAACCA
CGGAACTATTTACTTTTAGCATGCCATGCTTCCAATGAATCGGTTCAGCTCTATCAGATG
TCTCGGTGGGCTAGGGCACAGGGGTATTTGGAGAAAAAGGAGCCAGAGGCTCAGCAGTAA
AAAAAAGACGCAAAGCGCAGCATTTAGCTTCTCAATAAGAAAACTTGTCTCATGTCCATC
AATGCTGAGTCTGTAACACAATATAATCTCAGATCATATCTTCCTTGTGTGCCATAAGTG
CTTGCCCCTAATGTTATTTGATGTCAAACCTGTTCCAGAAAAATCAGAATCGCACATAAT
TTCTGGTTGTTTTTCTGAAAACCTTTATGATTTCCTGTTTGTAAAAACTCATCACATTGT
GTTGAAAATGATTGGTTCCAAATGT