Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0372400-02
CDS Infomation

cds chromosome:IRGSP-1.0:9:12407487:12413260:1 gene:Os09g0372400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cDNA clone:J033042L23, full insert sequence. (Os09t0372400-01);Conserved hypothetical protein. (Os09t0372400-02)
Sequence

ATGGAGCCACCGCCGCGGGGAACCAAGCGCCCGCTCCCGGCCGACGCCGACGCCGACGCC
GACGCCGCCGGCGGAGACGACGACGACGGCGCTCTTCCCGGGGAGCGCAAGCCGCGGTTC
CCCAAGGGGAAGAAGGCCAAGTACCGGGACCCCGCCGCAGCCGCCGCGGCGGAGGGCATC
GACGGCTTGATAAACCCCGAGCTCGCGGCGGAGCGGCGCGCGAGGCGACGCCACCGCAAG
GACGAGGATGACCAGCAGGGAGTCGCCTCCGACGTCAGGGGATTCGAAGTGCGATACGAG
GATAGTGCAAATTTGGTTGATGATGGCATTCGACTAGAGCCTTTTAACTTGGAACAAGAG
AGGGAGGAAGGATATTTTGACGAAAACGGAAACTTTGTGGAGTACGCAAGGGGCAACGAC
ATCAAGGATGCCTGGTTGGATAGTGTTGAAGTTGACACAAAGTATGCTGAAAAGGTTCAA
AAGAAGAGAGAGAAAGAGAAAGAAGAGGAGTTCCAGGATCTTTCATCCGATGATATTGGA
AAGATAAAAAGAAGAATATCAAACATACTTGAGCCAGGCGAAACGATAATACAAGCTTTG
AAAAGATTGAAGAATACATCCAGTGATAAGCGTGGCAAGATGACTGAGGGGACCAAACGT
ATCTTTGATGAGTTGACAGAAGCTGCCATGAAGCTAATGGAGAACGGAGAGTATAATGTT
TATTCAGATGATCGGGAGACTTTTGAACGTGAGGCTGCGGGTTATGAACGTCTGGCACGT
GCTCGTCTTGGTCTGCCAGAAGCTGAAGAAGATATGTTTGCAGACAGTCCAAAAGATAAA
ACCACTGCCTCGTTACTGGATATGGAGCCTGGTCCTTCAGCTGCCCATACCTCTACAACC
ACCACCACATCTAAGGAAGATGACAGTGACTTTGACATGTTTGGTGACGATGATGACAAG
ACCGATGTCAAACGTGATTCTGATGCAAATGCTGTAGGTTCAGGTTCGAATCCTGAACAA
GTATCTCACGATGCTAATGAAACCTCAGGTGCAGAGAAAGGTGAGAATGGAAGTGTGAGC
TCAGATTATGTTTATGATCCAACTTCAGGTTATTACTATAGCAGTAGCACGGGCTATTAC
TATGATTCTACATCTGGATGTTATTGCTCTGCATCTACAGGAGCCTGGTACTCGTATGAC
GAACAAACTGGCGAATACAAAGAGATACAGTCTGAACAAGCCAGCACGGTCAATGAAACA
CCGGGAGATGGCATCAAAGAGTAG

Peptide Sequence

PEP ID

Os09t0372400-02
PEP Infomation

pep chromosome:IRGSP-1.0:9:12407487:12413260:1 gene:Os09g0372400 transcript:Os09t0372400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cDNA clone:J033042L23, full insert sequence. (Os09t0372400-01);Conserved hypothetical protein. (Os09t0372400-02)
Sequence

MEPPPRGTKRPLPADADADADAAGGDDDDGALPGERKPRFPKGKKAKYRDPAAAAAAEGI
DGLINPELAAERRARRRHRKDEDDQQGVASDVRGFEVRYEDSANLVDDGIRLEPFNLEQE
REEGYFDENGNFVEYARGNDIKDAWLDSVEVDTKYAEKVQKKREKEKEEEFQDLSSDDIG
KIKRRISNILEPGETIIQALKRLKNTSSDKRGKMTEGTKRIFDELTEAAMKLMENGEYNV
YSDDRETFEREAAGYERLARARLGLPEAEEDMFADSPKDKTTASLLDMEPGPSAAHTSTT
TTTSKEDDSDFDMFGDDDDKTDVKRDSDANAVGSGSNPEQVSHDANETSGAEKGENGSVS
SDYVYDPTSGYYYSSSTGYYYDSTSGCYCSASTGAWYSYDEQTGEYKEIQSEQASTVNET
PGDGIKE

Transcript Sequence

Transcript ID

Os09t0372400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:12407487:12413260:1 gene:Os09g0372400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cDNA clone:J033042L23, full insert sequence. (Os09t0372400-01);Conserved hypothetical protein. (Os09t0372400-02)
Sequence

CTGACGTCATCTCCGCCGCCACCCCCGCTCGCCGCCGACCCATGGAGCCACCGCCGCGGG
GAACCAAGCGCCCGCTCCCGGCCGACGCCGACGCCGACGCCGACGCCGCCGGCGGAGACG
ACGACGACGGCGCTCTTCCCGGGGAGCGCAAGCCGCGGTTCCCCAAGGGGAAGAAGGCCA
AGTACCGGGACCCCGCCGCAGCCGCCGCGGCGGAGGGCATCGACGGCTTGATAAACCCCG
AGCTCGCGGCGGAGCGGCGCGCGAGGCGACGCCACCGCAAGGACGAGGATGACCAGCAGG
GAGTCGCCTCCGACGTCAGGGGATTCGAAGTGCGATACGAGGATAGTGCAAATTTGGTTG
ATGATGGCATTCGACTAGAGCCTTTTAACTTGGAACAAGAGAGGGAGGAAGGATATTTTG
ACGAAAACGGAAACTTTGTGGAGTACGCAAGGGGCAACGACATCAAGGATGCCTGGTTGG
ATAGTGTTGAAGTTGACACAAAGTATGCTGAAAAGGTTCAAAAGAAGAGAGAGAAAGAGA
AAGAAGAGGAGTTCCAGGATCTTTCATCCGATGATATTGGAAAGATAAAAAGAAGAATAT
CAAACATACTTGAGCCAGGCGAAACGATAATACAAGCTTTGAAAAGATTGAAGAATACAT
CCAGTGATAAGCGTGGCAAGATGACTGAGGGGACCAAACGTATCTTTGATGAGTTGACAG
AAGCTGCCATGAAGCTAATGGAGAACGGAGAGTATAATGTTTATTCAGATGATCGGGAGA
CTTTTGAACGTGAGGCTGCGGGTTATGAACGTCTGGCACGTGCTCGTCTTGGTCTGCCAG
AAGCTGAAGAAGATATGTTTGCAGACAGTCCAAAAGATAAAACCACTGCCTCGTTACTGG
ATATGGAGCCTGGTCCTTCAGCTGCCCATACCTCTACAACCACCACCACATCTAAGGAAG
ATGACAGTGACTTTGACATGTTTGGTGACGATGATGACAAGACCGATGTCAAACGTGATT
CTGATGCAAATGCTGTAGGTTCAGGTTCGAATCCTGAACAAGTATCTCACGATGCTAATG
AAACCTCAGGTGCAGAGAAAGGTGAGAATGGAAGTGTGAGCTCAGATTATGTTTATGATC
CAACTTCAGGTTATTACTATAGCAGTAGCACGGGCTATTACTATGATTCTACATCTGGAT
GTTATTGCTCTGCATCTACAGGAGCCTGGTACTCGTATGACGAACAAACTGGCGAATACA
AAGAGATACAGTCTGAACAAGCCAGCACGGTCAATGAAACACCGGGAGATGGCATCAAAG
AGTAGCCCGAGTACTTGTAATTGGCTCTCTCAAGTTAGCTTGTTTATTACACAGTGGGAT
GTAGCTTCAGTTTTTCGGTAGAGGGGCATTCGAATCTCACTTTTGTTTGTACAAGTACGG
GGAGAATGAAAGGCTGTCTTACTACCATAGGATTTTATTTAGATATAGAGCAGAATGATC
CGCTGAGTGCAACCCTTACGCCCACTTCTTTATTTTGCATTGCCCCATGGTCCATTTCCC
TGTACAAATCTGTGACATGTAATATTCCCTGCCATGTTCAGCTTC