Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0371000-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:12345752:12349518:1 gene:Os09g0371000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Major facilitator superfamily protein. (Os09t0371000-01)
Sequence

ATGGCGGCGGCGGAGGCGGAGGCGGGGAGGAGGACGCTGGCGCTGGTGAACATGGCGGCG
ATCATGGAGCGCGCCGACGAGGCGCTGCTGCCGGCGGTGTACAGGGAGGTGGGCGCGGCG
CTGCACGCGACGCCCATGGGGCTCGGCGCGCTCACGCTGTGCCGCTCCTTCGTGCAGGCG
GCGTGCTACCCGCTCGCCGCCTACGCCGCCGTGCGCTACAACCGCGCGCACGTCGTCGCC
GCCGGGGCCTTCCTCTGGGCCGCCGCCACCTTCCTCGTCGCCGTTTCCGACACCTTCGCC
CAGGTAGCGGTAGCGAGGGGATTGAACGGTGTTGGGCTAGCGCTCGTCACCCCAGCCATC
CAATCTCTGGTGGCAGACTGCAGCGACGACACCACCCGTGGCTCCGCATTCGGATGGCTT
CAGCTCACAGGAAACATCGGTTCGGTGATCGGAGGATTGTTCTCCCTCATGCTAGCATCC
ACGACGATCATGGGCGTCGCCGGTTGGCGCGTCGCGTTCCACATCGTCGCTCTGATTAGC
GTGATCGTCGGCGCGTTGGTTCGCCTCTTCGCGGTGGATCCTCATTTCTGCAGCAACATC
CAAGACGACGGTGGTGGTGATCAGCTACCTCCTCGCAAGTCGCCATTGGAGGAGATGAAG
GATCTGGTGGTAGAAGCCAGGGCCGTGGTGAGGATACCGTCGTTTCAGATCATCGTCGCT
CAGGGTGTCACAGGGTCATTTCCATGGTCCGCGCTGTCGTTCGCGCCGATGTGGCTGGAG
CTGATGGGATTCACGCATGAGATGACCGGGCTTCTGACGACGAGCTTCGCGTTGGCGAGC
TCGCTTGGGGGGCTTTTGGGTGGGAAGATGGGGGATCGTCTGGCTGTTCGCTACCCGGAT
TCTGGTCGGATTGTTCTGTCCCAGATAAGCTCAGCTTCGGCGATCCCGCTTGCGGCTTTG
CTGCTCCTTGCGCTGCCTGATGATTCCTCTTCTGGATTCCTGCATGGGTTTGTCATGTTT
ATCATGGGGCTAAGCATCTCCTGGAATGGTCCTGCTACTAACAACCCCATATTTGCGGAG
ATTGTTCCTGAGAGATCAAGGACAAGTATATACGCTCTGGACCGCTCTTTCGAGTCGGTC
CTAGCCTCATTCGCTCCACCGATCGTCGGGTTCTTGGCGGAGCACGCCTACGGCTACAAC
CCGGTCTCCTACGGAGCCGGATCGAGCAGTGACAGGGAGAACGCCGCTGCCCTGGCCAAG
GCTCTGTACACCGCGATCGCCATCCCCATGCTGCTCTGCTGCTTCATCTACTCCCTGCTG
TATGGCACGTACCCGCGCGACAGGGAGAGGGCGAGGATGGACACCTTGATCGCGTCGGAG
CTCCAGCAGATCGAGCTGGAGCGGTGCCATCGGGCAGGAATAGGAAGTAGGAGAAGCAAG
GATGGCACCGTGATCGATGTCGAGTATGGTGAGGAAGAGTCTGGTGATGTTGTTGATGAT
GATGATGATGAGAAAGCGTTGATGCGTTACCATGTTGAACAGTGTGGCAGTGTTGGCAGG
TGA

Peptide Sequence

PEP ID

Os09t0371000-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:12345752:12349518:1 gene:Os09g0371000 transcript:Os09t0371000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Major facilitator superfamily protein. (Os09t0371000-01)
Sequence

MAAAEAEAGRRTLALVNMAAIMERADEALLPAVYREVGAALHATPMGLGALTLCRSFVQA
ACYPLAAYAAVRYNRAHVVAAGAFLWAAATFLVAVSDTFAQVAVARGLNGVGLALVTPAI
QSLVADCSDDTTRGSAFGWLQLTGNIGSVIGGLFSLMLASTTIMGVAGWRVAFHIVALIS
VIVGALVRLFAVDPHFCSNIQDDGGGDQLPPRKSPLEEMKDLVVEARAVVRIPSFQIIVA
QGVTGSFPWSALSFAPMWLELMGFTHEMTGLLTTSFALASSLGGLLGGKMGDRLAVRYPD
SGRIVLSQISSASAIPLAALLLLALPDDSSSGFLHGFVMFIMGLSISWNGPATNNPIFAE
IVPERSRTSIYALDRSFESVLASFAPPIVGFLAEHAYGYNPVSYGAGSSSDRENAAALAK
ALYTAIAIPMLLCCFIYSLLYGTYPRDRERARMDTLIASELQQIELERCHRAGIGSRRSK
DGTVIDVEYGEEESGDVVDDDDDEKALMRYHVEQCGSVGR

Transcript Sequence

Transcript ID

Os09t0371000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:12345752:12349518:1 gene:Os09g0371000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Major facilitator superfamily protein. (Os09t0371000-01)
Sequence

AAAAAATAATAAAATAAATAAATAAATTATCTCTCGGAGAGGAGCCGCGTGCACCGCCGC
GCCGGGGAAGAGGCCAAGAGGGGGATCATCACCGGCGGTGATCGGGCTGGGCCTTGGGGG
AGATATGGCGGCGGCGGAGGCGGAGGCGGGGAGGAGGACGCTGGCGCTGGTGAACATGGC
GGCGATCATGGAGCGCGCCGACGAGGCGCTGCTGCCGGCGGTGTACAGGGAGGTGGGCGC
GGCGCTGCACGCGACGCCCATGGGGCTCGGCGCGCTCACGCTGTGCCGCTCCTTCGTGCA
GGCGGCGTGCTACCCGCTCGCCGCCTACGCCGCCGTGCGCTACAACCGCGCGCACGTCGT
CGCCGCCGGGGCCTTCCTCTGGGCCGCCGCCACCTTCCTCGTCGCCGTTTCCGACACCTT
CGCCCAGGTAGCGGTAGCGAGGGGATTGAACGGTGTTGGGCTAGCGCTCGTCACCCCAGC
CATCCAATCTCTGGTGGCAGACTGCAGCGACGACACCACCCGTGGCTCCGCATTCGGATG
GCTTCAGCTCACAGGAAACATCGGTTCGGTGATCGGAGGATTGTTCTCCCTCATGCTAGC
ATCCACGACGATCATGGGCGTCGCCGGTTGGCGCGTCGCGTTCCACATCGTCGCTCTGAT
TAGCGTGATCGTCGGCGCGTTGGTTCGCCTCTTCGCGGTGGATCCTCATTTCTGCAGCAA
CATCCAAGACGACGGTGGTGGTGATCAGCTACCTCCTCGCAAGTCGCCATTGGAGGAGAT
GAAGGATCTGGTGGTAGAAGCCAGGGCCGTGGTGAGGATACCGTCGTTTCAGATCATCGT
CGCTCAGGGTGTCACAGGGTCATTTCCATGGTCCGCGCTGTCGTTCGCGCCGATGTGGCT
GGAGCTGATGGGATTCACGCATGAGATGACCGGGCTTCTGACGACGAGCTTCGCGTTGGC
GAGCTCGCTTGGGGGGCTTTTGGGTGGGAAGATGGGGGATCGTCTGGCTGTTCGCTACCC
GGATTCTGGTCGGATTGTTCTGTCCCAGATAAGCTCAGCTTCGGCGATCCCGCTTGCGGC
TTTGCTGCTCCTTGCGCTGCCTGATGATTCCTCTTCTGGATTCCTGCATGGGTTTGTCAT
GTTTATCATGGGGCTAAGCATCTCCTGGAATGGTCCTGCTACTAACAACCCCATATTTGC
GGAGATTGTTCCTGAGAGATCAAGGACAAGTATATACGCTCTGGACCGCTCTTTCGAGTC
GGTCCTAGCCTCATTCGCTCCACCGATCGTCGGGTTCTTGGCGGAGCACGCCTACGGCTA
CAACCCGGTCTCCTACGGAGCCGGATCGAGCAGTGACAGGGAGAACGCCGCTGCCCTGGC
CAAGGCTCTGTACACCGCGATCGCCATCCCCATGCTGCTCTGCTGCTTCATCTACTCCCT
GCTGTATGGCACGTACCCGCGCGACAGGGAGAGGGCGAGGATGGACACCTTGATCGCGTC
GGAGCTCCAGCAGATCGAGCTGGAGCGGTGCCATCGGGCAGGAATAGGAAGTAGGAGAAG
CAAGGATGGCACCGTGATCGATGTCGAGTATGGTGAGGAAGAGTCTGGTGATGTTGTTGA
TGATGATGATGATGAGAAAGCGTTGATGCGTTACCATGTTGAACAGTGTGGCAGTGTTGG
CAGGTGACCAAAGGAGTGATCAGGTCAGAAAAGCTCCTGAACTTCATGATACAATCTGCC
AAAAATTTTCCACGGTTTTTGTACAGGAAACAGATTACACGGGTTC