Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0369400-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:12251875:12254061:1 gene:Os09g0369400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TREHALOSE-6-PHOSPHATE PHOSHPHATASE 7 description:Similar to predicted protein. (Os09t0369400-01)
Sequence	ATGGCGAAGGCGAGCGTGGTGGTGCCTGAGCAGGTGGGCGCGGCGGCGGCGGCGCAGGTG GGGTGCCCCTGTCCGGGCACGACGCTGTTCCCGTACCCGCCGCCGCGCGCCGGGATCGCC GTGCGGCGCAAGTGCCTGCAGGCGGCGCAGCAGCTGGAGCTCGGCGCCGGGCTGCGCGGC GGCTGGGTGGAGTCCATGCGGGCGTCGTCGCCCACCCACGCCAAGGCCGCCGCCGCCCTC GCCGCCGGCGTCGACGAGGAGCACGCCGCCTGGATGGCGAGGCACCCGTCGGCGCTGGGC GAGTTCGAGAAGGTGGTGGCGGCGTCGAAGGGGAAGCAGATCGTCATGTTCCTCGACTAC GACGGCACCCTCTCCCCCATCGTCGACGACCCCGACGCCGCCTTCATGAGCGAGACGATG CGGATGGCCGTGCGCAGCGTGGCGAAGCACTTCCCGACGGCGATCGTGAGCGGGCGGTGC CGCGACAAGGTGTTCGAGTTCGTGAAGCTCGCCGAGCTGTACTACGCGGGGAGCCACGGC ATGGACATCAAGGGCCCCGCCTCCCGCCACGCCGCCGCCAAGTCTCCTCCCCACAACAAG GGAGTCCTCTTCCAGCCGGCCAGCGAGTTCCTCCCCATGATCGAGCAGGTGCACCAGCGA CTCGAGCAGGCCACCAGCTCCATCCCGGGCGCCAAGGTCGAGAACAACAAGTTCTGCGTC TCCGTCCACTTCCGGTGCGTCGACGAGAAGAGTTGGGGGGCGTTGGCGGAGACGGTGAGG AGGGTGGTGAGGGAGTTCCCGCGGCTGCGGCTGAGCCAGGGGAGGATGGTGTTCGAGGTG CGGCCGACCATCAAGTGGGACAAGGGCAAGGCCCTCGAGTTCCTCCTCGACTCGCTCGGT TTCGCCGACTGCAGCGACGTGCTGCCGGTCTACATCGGCGACGACCGCACGGACGAGGAC GCGTTCAAGGTTTTGCGGCGGCGTGGGCAGGGCGTGGGGATCCTGGTGTCCAAGCACCCC AAGGAGACGAGCGCCTCCTTCTCCCTCCAGGAGCCCGCCGAGGTGATGGAGTTCTTGCTG CGGCTCGTGGAGTGGAATCGCCTGTCCAGGACACGGTTGAGGCTGTAA

Peptide Sequence

PEP ID	Os09t0369400-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:12251875:12254061:1 gene:Os09g0369400 transcript:Os09t0369400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TREHALOSE-6-PHOSPHATE PHOSHPHATASE 7 description:Similar to predicted protein. (Os09t0369400-01)
Sequence	MAKASVVVPEQVGAAAAAQVGCPCPGTTLFPYPPPRAGIAVRRKCLQAAQQLELGAGLRG GWVESMRASSPTHAKAAAALAAGVDEEHAAWMARHPSALGEFEKVVAASKGKQIVMFLDY DGTLSPIVDDPDAAFMSETMRMAVRSVAKHFPTAIVSGRCRDKVFEFVKLAELYYAGSHG MDIKGPASRHAAAKSPPHNKGVLFQPASEFLPMIEQVHQRLEQATSSIPGAKVENNKFCV SVHFRCVDEKSWGALAETVRRVVREFPRLRLSQGRMVFEVRPTIKWDKGKALEFLLDSLG FADCSDVLPVYIGDDRTDEDAFKVLRRRGQGVGILVSKHPKETSASFSLQEPAEVMEFLL RLVEWNRLSRTRLRL

Transcript Sequence

Transcript ID	Os09t0369400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:12251875:12254061:1 gene:Os09g0369400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TREHALOSE-6-PHOSPHATE PHOSHPHATASE 7 description:Similar to predicted protein. (Os09t0369400-01)
Sequence	AAGCAAACCAATCATCACCTCTTCTTCTTGGGGTGTTCTTGACTGGAAGGTTTCTTTGGT GATGGCGAAGGCGAGCGTGGTGGTGCCTGAGCAGGTGGGCGCGGCGGCGGCGGCGCAGGT GGGGTGCCCCTGTCCGGGCACGACGCTGTTCCCGTACCCGCCGCCGCGCGCCGGGATCGC CGTGCGGCGCAAGTGCCTGCAGGCGGCGCAGCAGCTGGAGCTCGGCGCCGGGCTGCGCGG CGGCTGGGTGGAGTCCATGCGGGCGTCGTCGCCCACCCACGCCAAGGCCGCCGCCGCCCT CGCCGCCGGCGTCGACGAGGAGCACGCCGCCTGGATGGCGAGGCACCCGTCGGCGCTGGG CGAGTTCGAGAAGGTGGTGGCGGCGTCGAAGGGGAAGCAGATCGTCATGTTCCTCGACTA CGACGGCACCCTCTCCCCCATCGTCGACGACCCCGACGCCGCCTTCATGAGCGAGACGAT GCGGATGGCCGTGCGCAGCGTGGCGAAGCACTTCCCGACGGCGATCGTGAGCGGGCGGTG CCGCGACAAGGTGTTCGAGTTCGTGAAGCTCGCCGAGCTGTACTACGCGGGGAGCCACGG CATGGACATCAAGGGCCCCGCCTCCCGCCACGCCGCCGCCAAGTCTCCTCCCCACAACAA GGGAGTCCTCTTCCAGCCGGCCAGCGAGTTCCTCCCCATGATCGAGCAGGTGCACCAGCG ACTCGAGCAGGCCACCAGCTCCATCCCGGGCGCCAAGGTCGAGAACAACAAGTTCTGCGT CTCCGTCCACTTCCGGTGCGTCGACGAGAAGAGTTGGGGGGCGTTGGCGGAGACGGTGAG GAGGGTGGTGAGGGAGTTCCCGCGGCTGCGGCTGAGCCAGGGGAGGATGGTGTTCGAGGT GCGGCCGACCATCAAGTGGGACAAGGGCAAGGCCCTCGAGTTCCTCCTCGACTCGCTCGG TTTCGCCGACTGCAGCGACGTGCTGCCGGTCTACATCGGCGACGACCGCACGGACGAGGA CGCGTTCAAGGTTTTGCGGCGGCGTGGGCAGGGCGTGGGGATCCTGGTGTCCAAGCACCC CAAGGAGACGAGCGCCTCCTTCTCCCTCCAGGAGCCCGCCGAGGTGATGGAGTTCTTGCT GCGGCTCGTGGAGTGGAATCGCCTGTCCAGGACACGGTTGAGGCTGTAACAATTGAATTT AACCGGCGAGGCTAGCTAGAGAGAAGCGCGTGATCTGGGCCGTCCAAGCGATTACATCGG CAGGGTAACCCGTGACGCTGATCGATCGTGGATTCTACACCAACACAGGTGCTCGAAAAT GGTGTCCACATTGCAGAAGCGCAGAGAGCTAATTAATCAACGACGGACGAGAGAAACTGA TGGCTGTCTGGCCATTGTTGTGCCATAATCCTGTTTAGTTCTTCACCTTTCTCCCTTCTT CTTTTTTCCCATTTGGGGCCCCCCTTTTGGTACCAACCATGTAAATTCCGTACTACTAGT ACCTTGTCATGCACAAGAGGAAGATCAATGCAAATAATGAAGAGCAACT