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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0364900-02
CDS Infomation

cds chromosome:IRGSP-1.0:9:11986004:11989538:1 gene:Os09g0364900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SNF1-related kinase complex anchoring protein SIP1. (Os09t0364900-01);Similar to SNF1-related kinase complex anchoring protein SIP1. (Os09t0364900-02)
Sequence

ATGGACCGGCAAGTCAGGGGTGACCATGAAGGGATCAACGTTGTTGGGTTTGAAGTGCCA
ACATCACCAGATTCAAGCTACAACAACCCTGTTCCTGGAAATGAAGATGAAGCTCGAGAG
CCCCCATTGGTTCCTCCTCATCTGCAGCATACATTATTGAGCTTCCCACCAAGCCAAGAT
GATTCAAGCAGCCTTCCTCCACCTCAAAACGTGGTACTCAACCACCTCTACATAGAGAAA
GAGAACTCTAGATCCGTCGTCGCCCTGGGGATTACCCATCGGTTCAGGGCAAAGTTTGTG
ACTGTTGTGCTGTACAAGCCCGTACAAAGGCGGTAG

Peptide Sequence

PEP ID

Os09t0364900-02
PEP Infomation

pep chromosome:IRGSP-1.0:9:11986004:11989538:1 gene:Os09g0364900 transcript:Os09t0364900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SNF1-related kinase complex anchoring protein SIP1. (Os09t0364900-01);Similar to SNF1-related kinase complex anchoring protein SIP1. (Os09t0364900-02)
Sequence

MDRQVRGDHEGINVVGFEVPTSPDSSYNNPVPGNEDEAREPPLVPPHLQHTLLSFPPSQD
DSSSLPPPQNVVLNHLYIEKENSRSVVALGITHRFRAKFVTVVLYKPVQRR

Transcript Sequence

Transcript ID

Os09t0364900-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:11986004:11989538:1 gene:Os09g0364900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SNF1-related kinase complex anchoring protein SIP1. (Os09t0364900-01);Similar to SNF1-related kinase complex anchoring protein SIP1. (Os09t0364900-02)
Sequence

AATTCTCCTCCTCGTCGTCGTCCTCCTCCGCCTCCTCACCACGCGCGACGCCCGCCGCCA
ACCAGTTTTGGTCGCAGGTGGCTGAGGAAGCAGTCTTCGGGTGGCCTTTGCGTGGTTTGC
TTCATCAATCTCTCCATCCTAAGGTGAGTGAAAGACTAGTCCCACCTGATTATTTGTGGC
TTTTGATGATCAATCTGGGTAGTTGGGAAATGTAGCTGCTGGAATTGTAGTTACTGAGAT
GGACATGAGCAGTTTACTTCTGTGCGGATTTGCGTGTACTTCAATTTGCTCTGAAATGCT
TGAAGAACTATATGATTTAGCTTATTTTAGATCTGTACCTATTATTAGATGCTACACTTT
ACATGGAAGGAAGACTATCTCGTGCTATTTTTGTGCTTGGGATTTATAGTTGGCTGTGGT
GGAGTACTTGAATTTTTGAATTATTTGTGTTCTTATCATATACAAAATATATGACTAAAG
TCAAAGAAATGTACAGATTTAAGACCCAATTTCCTAACGATAACTGCATGTCACAACTAA
ACCTGTACATATTTGTCAATATGCTCACACACGCCAATTCAAGGGCCCAATCCCACACGT
CACGTCGTAATAAATGAATTCCATGCAGTGATCCCACCAAAATCTTTACCCATAGTCCCC
AAACTAAATAACGTGTTGCCTTACGTTATTATCCATATCCCGCAAACAAAATGACACTTT
CCTATATTCTGTCTTCTTCCAACGCTTACCAGTTACCCCTATACTTGGAAGAAAGGCATC
CCTAACCGTACCAAAGCTCTAACCTCTACTTCATCACTAAACTCCAAAACTCAAGATTCA
GAGCAAGCTAAGCCTCAAGTTCACTCCATATTGGCCCATTTTTATGCAAGAGGCCTATGC
AGCTATCATGCACAGCCAAGGATGGTATTGATGAATTACGTTCATGGGGTGCCAGCAAAA
GGAAACGAATAAATGGAAGGGCGCATTTAATAAACACATAGCAAAACCAGATTTACCAAA
CTAGATCAAAGTCAAATGAATAAAAACAAATTAGGGATTCCGTACCAATAACAGACATCA
GTTTTCGGTATCTCTTCACACTGATCTCGCTTAGGAGAGGAGGAGAGTAGTTTGAGAAGG
CAGATTGTTATGGTATAAGGCAGGCATGCACTGCTGTGAACATTGATGATTCAGGCAGCA
GTGTTGAATTTGAGGGAGGGGATATGATGGAAGAGATATAAGAACATGTTGGGGATCACC
AGATGAGGTTGATTGAATTCTTGCTTATTTCCTCCTCTGCATTGGAACTGGATCAATTTA
CAAGGGAATTTTGTTTATCCTTGATTTCTTACCATGTATAGGAAATGATTTCTCTTTATG
AGGCCCCTAACAATGGAAAATTAAAGGATTGTCTAAATGCTCCCAACAGATATGCTTGGA
TGCAACTACACAACATAGTCCTTTAGCAATCATCTACGCTGCTGGCCCTGCCATTTATGC
ACCACCTCATGGGCCATAGCATGACATTCTGCTACTGACTTTTTGTATAGTCACTGCATA
TGAAGTTTTCCTTAGTGCATAAATTTCTATATATTAATCACCACTTAAGAACTGTGGATC
ATGTAAGCTTTATTCAACTACCTCCGTCCCAAATATAACAACTTCCGGCTATGAATCTAG
ACAAGCACATGTCCAGATTCATAGCTAAAAATGCTTAAATTTGGGGATGGAGGGTAATAC
TTAAGCATGGTACCTGGATTTTGGATTAGTGGGCTCTTACGGTCTACCATGATGATGTAC
TGATTACTATGTCTCTGTTTATCCATTAAAGTTTGGTTACTTCATTTCATTTTTTTTGTT
TCAAATACTTGTATGTGCTGATAAGGCTTTACTTCAATTTATTATGTCATTTTTTAGCAA
CAACCAGATTTTCATCTTTTGTCTGTATTAGTTCAGTTTAAGTGGTGACTGTTAATTACA
GAGCGAGTTGCTTCTCTTGGTTATGTGTATTTGAACGAAAAATTTAGCTAGTATAATCTT
TTTCTGAGGGAGCAGTTTTGGGTTGAAATTGGTCATTGAGAAAACATTGCAACTGTTTGA
AACTTTGAATTCAATTTTACTTTCTCCTTTCTGATGACACCAAATGCTGTAGAGCTCTTC
CGTACTGAAGGTGTTGCTAGTGATTCATATCTCTGACCCATTTGGTTCGACCAAACTTCC
AAACTGTCTTTTGCATGGAGTGAAGACAGGCATTATGTAAATTTGATGTGATGTTTATTA
GAGAGTATATGATTCTTATAAGAAATTAATGTTTGCTCTTAATTTTATTTTCAACTTCCC
AAGTGTACACATATTATTCTGATTCTTTACTCACTTGAGTTTTTTTTTTTCAAACCAGGA
TAGGCAACAGAGTGCTTTGCTAATTGCTATGGACCGGCAAGTCAGGGGTGACCATGAAGG
GATCAACGTTGTTGGGTTTGAAGTGCCAACATCACCAGATTCAAGCTACAACAACCCTGT
TCCTGGAAATGAAGATGAAGCTCGAGAGCCCCCATTGGTTCCTCCTCATCTGCAGCATAC
ATTATTGAGCTTCCCACCAAGCCAAGATGATTCAAGCAGCCTTCCTCCACCTCAAAACGT
GGTACTCAACCACCTCTACATAGAGAAAGAGAACTCTAGATCCGTCGTCGCCCTGGGGAT
TACCCATCGGTTCAGGGCAAAGTTTGTGACTGTTGTGCTGTACAAGCCCGTACAAAGGCG
GTAGGGTGAAACATTTTGTGTACCTGCATTCCTGCTTCCATTTCCTCGTGCAGGGACTAG
ACACCCACGAGGTTGAACTGCCAAACAAATAGAAACCCTCCTTGTTGTAGTCCTGAGGAA
ACAGAGGAACAATCTAGCTGCCCATGAATCTCAAATGATTCAACCCTTGTACTTAATTGG
CTGTTGGTTGCGGTGATTGGTGGTGGTCCAGTTGAATGTTGGTTT