Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0364000-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:11934577:11940113:1 gene:Os09g0364000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 59 description:Histidine triad motif domain containing protein. (Os09t0364000-01)
Sequence	ATGGCCGCCGCCGCTGCCTCGCCGTCTCCGGCGACGCCGCCGCGGATCCTCCTCGCCGGC GACGCGAACGGCCGCCTCCACCAGCTCTTCAAGCGCGTCACCTCGGTGAACCAGTCGACG GGGCCGTTCCACGCGCTGCTCTGCGTCGGGCAGTTCTTCTCCCCCGATGCCGGCGACGGG GATGGCGGCGGCGGCGGGGAGGTCGCGGACTACCTGGAGGGACGCGCCGCCGTGCCCATC CCGACCTACTTCACCGGGGACTACGGCCCCGCGGCGCCTCGCCTTCTCGCGAAGGCCGCG TCCAGCGCCCGAGGCTTCTCCCCCGGAGGCATCCAGATATGCCCCAACCTCTTCTGGCTC AGAGGCAGCGCCCGCTTCACCCTCCATGGTTTATCTGTCGTTTACTTGTCGGGAAGGAAA GGGCCAGGAGGGCCTGGCTGCTACAGCCAGGATGATGTTGATGCACTACGGGCTCTTGCC GAAGAGCCGGGGATTGTTGATTTGTTTTTGACTAACGAATGGCCTGCTGGAGTGGTGAAT GGAGTTGATACTTCTAATGCACCTTCTCAGATATCGGATCCTCATGGATATGATCCTGTA GTTGCTGAATTGGTTGCTGAGATTAAGCCACGATATCATATTGCAGGTTCTAAAGGTGTA TTCTATGCAAGGGAACCATATGTGAGTGATTCCGCTGCACATGTTACCCGTTTTATTGGA CTTGCTAATGTTGGAAACAAAGAGAAGCAGAAATTTATTCATGCAATTTCTCCTACTCCA GCATCTACCATGTCCAGTGTTGATATTCACGCAAGGCCTCCAAATACTACTTTATCCCCA TATATTTCTCCAGCAAAGTCAGTTCCTGTTGAAGAAACTCCAAAGCGTCCTGCTGAGGAT GCTGATTTGCAATACTGGCGTTACGATGTCAAGAAGCAAAGACATGGTGAAGCCGGTGGG AATCGTCTATGTTTCAAATTTACATCATCAGGATCCTGTCCTCGAGGGAGTAAATGCAAT TATAGGCATGATGAGGAGGCCAGGGAGCATTACAATAGGAATGTCTGTTTTGATTTCTTA AACAAAGGAAAATGTGAGAAGGGTCCTGAGTGTAGGTTTGCTCATAGCCTTTCTGATGAG GGTGCTGTTAGGGATACAAAACCACGTAGCGAACGAAGACGTGTTGAGAGCAGTTGCTGG TTCTGCTTGTCAAGTCCAGATGTTGAATCACATCTTGTTATCAGCATTGGAGAAGGTTAC TACTGTGCACTTGCAAAAGGGCCACTTGTTCCAAACCATGTTCTAGTTATACCAGTTGAG CACTGCTCTAGTACACTAAAGATGCCCGTGGAAGCTGAGGCAGAGCTTGGGAGATATAAG GATGCTCTGGCCAAGTATTTTGAGAAACAAGGAAAGATAGCTATATACTTCGAGTGGGTT TCTCAGCAGTCCCGCCATGCAAACCTTCAGGCTGTTCCAGTACCATTGTCTAAAGCATCA AGTGTTAAAAAGATATTCCATTTAGCAGCACAGAGACTGGGATTTGAATTTTCTGTAGTG AATCCAGATGGTGATGCTAACCGCGCCAGGGAATTGTTAAGATCAGAGTGTGACAGCAAA TCAAGCTTGTTTTATGTTGAGCTACCAGAAGGTTCAGTGCTTTTACATTTGGTTGACAGT AATGAGAAGTTCCCTGCTCAGTTTGGCCGTGAGGTGTTGGCTGGGTTGCTAAGCATGGCA GATCGTGCAGATTGGAGGAACTGTAAGGTTTCTAAAGAAGAAGAAATCCAGATGGTGGAT GATTTTAAACAAGGGTTTCGTGAGTTTGATCCAGCTGAATGA

Peptide Sequence

PEP ID	Os09t0364000-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:11934577:11940113:1 gene:Os09g0364000 transcript:Os09t0364000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 59 description:Histidine triad motif domain containing protein. (Os09t0364000-01)
Sequence	MAAAAASPSPATPPRILLAGDANGRLHQLFKRVTSVNQSTGPFHALLCVGQFFSPDAGDG DGGGGGEVADYLEGRAAVPIPTYFTGDYGPAAPRLLAKAASSARGFSPGGIQICPNLFWL RGSARFTLHGLSVVYLSGRKGPGGPGCYSQDDVDALRALAEEPGIVDLFLTNEWPAGVVN GVDTSNAPSQISDPHGYDPVVAELVAEIKPRYHIAGSKGVFYAREPYVSDSAAHVTRFIG LANVGNKEKQKFIHAISPTPASTMSSVDIHARPPNTTLSPYISPAKSVPVEETPKRPAED ADLQYWRYDVKKQRHGEAGGNRLCFKFTSSGSCPRGSKCNYRHDEEAREHYNRNVCFDFL NKGKCEKGPECRFAHSLSDEGAVRDTKPRSERRRVESSCWFCLSSPDVESHLVISIGEGY YCALAKGPLVPNHVLVIPVEHCSSTLKMPVEAEAELGRYKDALAKYFEKQGKIAIYFEWV SQQSRHANLQAVPVPLSKASSVKKIFHLAAQRLGFEFSVVNPDGDANRARELLRSECDSK SSLFYVELPEGSVLLHLVDSNEKFPAQFGREVLAGLLSMADRADWRNCKVSKEEEIQMVD DFKQGFREFDPAE

Transcript Sequence

Transcript ID	Os09t0364000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:11934577:11940113:1 gene:Os09g0364000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 59 description:Histidine triad motif domain containing protein. (Os09t0364000-01)
Sequence	ACCCAAAAACCCAAACCCCACCATGGCCGCCGCCGCTGCCTCGCCGTCTCCGGCGACGCC GCCGCGGATCCTCCTCGCCGGCGACGCGAACGGCCGCCTCCACCAGCTCTTCAAGCGCGT CACCTCGGTGAACCAGTCGACGGGGCCGTTCCACGCGCTGCTCTGCGTCGGGCAGTTCTT CTCCCCCGATGCCGGCGACGGGGATGGCGGCGGCGGCGGGGAGGTCGCGGACTACCTGGA GGGACGCGCCGCCGTGCCCATCCCGACCTACTTCACCGGGGACTACGGCCCCGCGGCGCC TCGCCTTCTCGCGAAGGCCGCGTCCAGCGCCCGAGGCTTCTCCCCCGGAGGCATCCAGAT ATGCCCCAACCTCTTCTGGCTCAGAGGCAGCGCCCGCTTCACCCTCCATGGTTTATCTGT CGTTTACTTGTCGGGAAGGAAAGGGCCAGGAGGGCCTGGCTGCTACAGCCAGGATGATGT TGATGCACTACGGGCTCTTGCCGAAGAGCCGGGGATTGTTGATTTGTTTTTGACTAACGA ATGGCCTGCTGGAGTGGTGAATGGAGTTGATACTTCTAATGCACCTTCTCAGATATCGGA TCCTCATGGATATGATCCTGTAGTTGCTGAATTGGTTGCTGAGATTAAGCCACGATATCA TATTGCAGGTTCTAAAGGTGTATTCTATGCAAGGGAACCATATGTGAGTGATTCCGCTGC ACATGTTACCCGTTTTATTGGACTTGCTAATGTTGGAAACAAAGAGAAGCAGAAATTTAT TCATGCAATTTCTCCTACTCCAGCATCTACCATGTCCAGTGTTGATATTCACGCAAGGCC TCCAAATACTACTTTATCCCCATATATTTCTCCAGCAAAGTCAGTTCCTGTTGAAGAAAC TCCAAAGCGTCCTGCTGAGGATGCTGATTTGCAATACTGGCGTTACGATGTCAAGAAGCA AAGACATGGTGAAGCCGGTGGGAATCGTCTATGTTTCAAATTTACATCATCAGGATCCTG TCCTCGAGGGAGTAAATGCAATTATAGGCATGATGAGGAGGCCAGGGAGCATTACAATAG GAATGTCTGTTTTGATTTCTTAAACAAAGGAAAATGTGAGAAGGGTCCTGAGTGTAGGTT TGCTCATAGCCTTTCTGATGAGGGTGCTGTTAGGGATACAAAACCACGTAGCGAACGAAG ACGTGTTGAGAGCAGTTGCTGGTTCTGCTTGTCAAGTCCAGATGTTGAATCACATCTTGT TATCAGCATTGGAGAAGGTTACTACTGTGCACTTGCAAAAGGGCCACTTGTTCCAAACCA TGTTCTAGTTATACCAGTTGAGCACTGCTCTAGTACACTAAAGATGCCCGTGGAAGCTGA GGCAGAGCTTGGGAGATATAAGGATGCTCTGGCCAAGTATTTTGAGAAACAAGGAAAGAT AGCTATATACTTCGAGTGGGTTTCTCAGCAGTCCCGCCATGCAAACCTTCAGGCTGTTCC AGTACCATTGTCTAAAGCATCAAGTGTTAAAAAGATATTCCATTTAGCAGCACAGAGACT GGGATTTGAATTTTCTGTAGTGAATCCAGATGGTGATGCTAACCGCGCCAGGGAATTGTT AAGATCAGAGTGTGACAGCAAATCAAGCTTGTTTTATGTTGAGCTACCAGAAGGTTCAGT GCTTTTACATTTGGTTGACAGTAATGAGAAGTTCCCTGCTCAGTTTGGCCGTGAGGTGTT GGCTGGGTTGCTAAGCATGGCAGATCGTGCAGATTGGAGGAACTGTAAGGTTTCTAAAGA AGAAGAAATCCAGATGGTGGATGATTTTAAACAAGGGTTTCGTGAGTTTGATCCAGCTGA ATGACAATGTGCTTAAGTTGCTAATTTGTCACCGGACAAGAACGTGCTGCTAAACTTGCA TTGTATTTTTGTAGTTGAAAGTACTTAGGTAGGCCATATTTGAGAAATGGACCGACTTTG AGGTCCATTATTGTAATTTCTATTGATTGATTCGGGAACAATTTTTTTTTCAGTTAAGAG TTAAAATTTGGCCGTAGTGCCACGTTTGTTCTTCGAGACTTCTCGTATACAATGTGATGA TCTGAGGCGATGGGCAGTGGTCG