Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0363900-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:11920888:11925930:-1 gene:Os09g0363900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ONION3 description:Putative omega-alcohol dehydrogenase, Biosynthesis of long-chain fatty acids, Organ separation, Shoot development (Os09t0363900-01)
Sequence	ATGGCTTTGAGCAAGAGAATGCTATTCATCTTCCAGGCCATGGTTTGCCTCTGCTCCTTC AGTTTATCCCAAGGCAACCAGCAATTCAGCTTAAGGAATCTCCCTACCCTCCAGAAGGCG AGCAGCTTCCCAGCGATGCGCCACGAGACATACGACTACATTGTCGTCGGCGGGGGCACC GCCGGTTGCCCCCTGGCGGCGACATTGTCGCTCAAGTACAAGGTGCTCCTGCTGGAGAGG GGAGGGTCTCCGTATGGCAACCGCAACGTCTCCTACATGGAGAACTTCCACATTGGCCTG AGCAATATGGCGCCGGACTCGGCGTCTCAGGCCTTCATCTCCACTGACGGCGTCATCAAT GCCCGAGCGAGGGTGTTGGGAGGTGGCACCTGCATCAATGCCGGCTTCTACAGCCGGGCC AGCTCAAACTTCATCCAGGAGGTAGGCTGGGATGAAGACCTGGTGAATGAGTCCTTCCCT TGGGTGGAGGACAAGATCGTCCAGTGGCCTAAGATCGCACCTTGGCAGGCTGCACTAAGG GATGGGCTACTCCAAGCAGGTGTATCTCCTTTCAATGGCTACACATATGACCATGTTTCT GGGACCAAAGTTGGTGGCACCATCTTTGATGAGACTGGCTACCGCCACACAGCAGCCGAC TTACTTGCAGCTGGAGACCCTAACAACCTAAGGGTGCTGCTTCATGCTAGTGTGAACAGG ATAGTCTTTAACTCGCAGAGAGGGCAACTGAAGCCAAGAGCAACCGGAGTTCAGTTCACC GATGAGAATGGAGGACTCCACCAGGCATTCCTCAACAGCAACTGTGATAGTGAAATCATT GTCTCTGCTGGCGCAATTGGCAGCCCCCAGCTGCTATTGCTCAGTGGGATTGGACCCAAG AATGACCTTAGGAGCCATAAAATTCCTGTAGTTCTCCATAACAAGTATGTGGGTAAAGGG ATGGCTGATAACCCCATGAACTCCATATTCATACCGACGAAAAGCCCCCCTCGCCAGTCC CTGATTGAGACTGTTGGAATAACTGAAGCTGGTGTGTTCATTGAGGCCAGTAGTGGTTTT GGCCAGTCACCAGAAAGCATCCATTGCCACCATGGAATCATGTCCGCTGAGATTGGACAG CTGTCCACAATTCCTCCGAAGGAAAGAAGCCTGGAAAAAGCACAGAAGTATGCAAATACC AAACTTAATCTACCCAAAGAGATATTCCATGGTGGTTTTATCCTCGAGAAGATTGATGGT CCACTGTCTACGGGACATCTTGCCCTGATAGACACTGATGTCAAGAAGAACCCTGCGGTT ACCTTCAACTACTTCAGTCATCCACAGGATCTCACTCGTTGCGTCTATGGTATCAAGACC ATTGAACGAATACTGAAGACAAACCGTTTCTCTGAACTGTCTGCCAACACTGATGGACAT TCAATGGAAAGAGTGCTCAATATGAGTGTGCAGGCTAATGTGAACTTGATACCCAAGCAT ACAAATGACACAGAATCCCTAGAGCAATTTTGCAGGGATACAGTAATAACCATCTGGCAC TACCATGGTGGATGCCATGTAGGGAAGGTGGTTGATCAGCAACACCGTGTGCTTGGAGTT TCAGGCGTCCGTGTAGTCGATGGCTCAACATTTTCTAGATCACCAGGGACGAACCCTCAA GCCACGGTCATGATGATGGGCAGATATTTTGGAGTGATGATCCTAAGGGGAAGACTAGGT CGAGCAGCTGGAGTGTAA

Peptide Sequence

PEP ID	Os09t0363900-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:11920888:11925930:-1 gene:Os09g0363900 transcript:Os09t0363900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ONION3 description:Putative omega-alcohol dehydrogenase, Biosynthesis of long-chain fatty acids, Organ separation, Shoot development (Os09t0363900-01)
Sequence	MALSKRMLFIFQAMVCLCSFSLSQGNQQFSLRNLPTLQKASSFPAMRHETYDYIVVGGGT AGCPLAATLSLKYKVLLLERGGSPYGNRNVSYMENFHIGLSNMAPDSASQAFISTDGVIN ARARVLGGGTCINAGFYSRASSNFIQEVGWDEDLVNESFPWVEDKIVQWPKIAPWQAALR DGLLQAGVSPFNGYTYDHVSGTKVGGTIFDETGYRHTAADLLAAGDPNNLRVLLHASVNR IVFNSQRGQLKPRATGVQFTDENGGLHQAFLNSNCDSEIIVSAGAIGSPQLLLLSGIGPK NDLRSHKIPVVLHNKYVGKGMADNPMNSIFIPTKSPPRQSLIETVGITEAGVFIEASSGF GQSPESIHCHHGIMSAEIGQLSTIPPKERSLEKAQKYANTKLNLPKEIFHGGFILEKIDG PLSTGHLALIDTDVKKNPAVTFNYFSHPQDLTRCVYGIKTIERILKTNRFSELSANTDGH SMERVLNMSVQANVNLIPKHTNDTESLEQFCRDTVITIWHYHGGCHVGKVVDQQHRVLGV SGVRVVDGSTFSRSPGTNPQATVMMMGRYFGVMILRGRLGRAAGV

Transcript Sequence

Transcript ID	Os09t0363900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:11920888:11925930:-1 gene:Os09g0363900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ONION3 description:Putative omega-alcohol dehydrogenase, Biosynthesis of long-chain fatty acids, Organ separation, Shoot development (Os09t0363900-01)
Sequence	AGGAAACAGGGGAGGGAGAGAGGTTTTGCCACCGTTGTTTTGGAGGGAAGGAAAATCCTA AGAAGGGGAAAGAGTTTAGCTTGGCAGGTGGTTCTCAGGCTCAATGGCTTTGAGCAAGAG AATGCTATTCATCTTCCAGGCCATGGTTTGCCTCTGCTCCTTCAGTTTATCCCAAGGCAA CCAGCAATTCAGCTTAAGGAATCTCCCTACCCTCCAGAAGGCGAGCAGCTTCCCAGCGAT GCGCCACGAGACATACGACTACATTGTCGTCGGCGGGGGCACCGCCGGTTGCCCCCTGGC GGCGACATTGTCGCTCAAGTACAAGGTGCTCCTGCTGGAGAGGGGAGGGTCTCCGTATGG CAACCGCAACGTCTCCTACATGGAGAACTTCCACATTGGCCTGAGCAATATGGCGCCGGA CTCGGCGTCTCAGGCCTTCATCTCCACTGACGGCGTCATCAATGCCCGAGCGAGGGTGTT GGGAGGTGGCACCTGCATCAATGCCGGCTTCTACAGCCGGGCCAGCTCAAACTTCATCCA GGAGGTAGGCTGGGATGAAGACCTGGTGAATGAGTCCTTCCCTTGGGTGGAGGACAAGAT CGTCCAGTGGCCTAAGATCGCACCTTGGCAGGCTGCACTAAGGGATGGGCTACTCCAAGC AGGTGTATCTCCTTTCAATGGCTACACATATGACCATGTTTCTGGGACCAAAGTTGGTGG CACCATCTTTGATGAGACTGGCTACCGCCACACAGCAGCCGACTTACTTGCAGCTGGAGA CCCTAACAACCTAAGGGTGCTGCTTCATGCTAGTGTGAACAGGATAGTCTTTAACTCGCA GAGAGGGCAACTGAAGCCAAGAGCAACCGGAGTTCAGTTCACCGATGAGAATGGAGGACT CCACCAGGCATTCCTCAACAGCAACTGTGATAGTGAAATCATTGTCTCTGCTGGCGCAAT TGGCAGCCCCCAGCTGCTATTGCTCAGTGGGATTGGACCCAAGAATGACCTTAGGAGCCA TAAAATTCCTGTAGTTCTCCATAACAAGTATGTGGGTAAAGGGATGGCTGATAACCCCAT GAACTCCATATTCATACCGACGAAAAGCCCCCCTCGCCAGTCCCTGATTGAGACTGTTGG AATAACTGAAGCTGGTGTGTTCATTGAGGCCAGTAGTGGTTTTGGCCAGTCACCAGAAAG CATCCATTGCCACCATGGAATCATGTCCGCTGAGATTGGACAGCTGTCCACAATTCCTCC GAAGGAAAGAAGCCTGGAAAAAGCACAGAAGTATGCAAATACCAAACTTAATCTACCCAA AGAGATATTCCATGGTGGTTTTATCCTCGAGAAGATTGATGGTCCACTGTCTACGGGACA TCTTGCCCTGATAGACACTGATGTCAAGAAGAACCCTGCGGTTACCTTCAACTACTTCAG TCATCCACAGGATCTCACTCGTTGCGTCTATGGTATCAAGACCATTGAACGAATACTGAA GACAAACCGTTTCTCTGAACTGTCTGCCAACACTGATGGACATTCAATGGAAAGAGTGCT CAATATGAGTGTGCAGGCTAATGTGAACTTGATACCCAAGCATACAAATGACACAGAATC CCTAGAGCAATTTTGCAGGGATACAGTAATAACCATCTGGCACTACCATGGTGGATGCCA TGTAGGGAAGGTGGTTGATCAGCAACACCGTGTGCTTGGAGTTTCAGGCGTCCGTGTAGT CGATGGCTCAACATTTTCTAGATCACCAGGGACGAACCCTCAAGCCACGGTCATGATGAT GGGCAGATATTTTGGAGTGATGATCCTAAGGGGAAGACTAGGTCGAGCAGCTGGAGTGTA ATCGATTCCTGGACACCAGCCTTTTGTTATGTGTGACCTAGAGAAGAAAAATTACTAATT ATTGCTGGGATCTAGTGTGATTCACCGAAGAAAGACAAGCTAGGAGTTTCATCTGTACCC AGTAATCATTTGTGTCATGTGATATTGCAGATCAAATGGTTTATTG