Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0363100-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:11880515:11885069:1 gene:Os09g0363100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Albino Leaf 2 description:Chloroplast group IIA intron splicing factor CRS1, Splicing of chloroplast group I and II introns, Chloroplast development (Os09t0363100-01)
Sequence	ATGGCGCTGCTCTTCCCACCACCACCCCACGCGCTCTCCCCCAAACCCCCCTTCCCCTCC ACTCTCCGCTCCACGAGGTCACTGCGTCTCCGCCGCGCCACCGCCGCCGCCGCCGCCGCC GGGGCCGGAGTCTCCTCCTCTTCCCCCTCGACCTCCTCGCCGGAGAAGGCCCCGGCGCTG GACGTCGCCAGCGGGAAGAGGGGTGGTAAGAAGAGGAGGTCCCTGAAGCCGAGCTTCGAG AAGCAGGCCATCCGCCGCTGGTCCGCGAGGGCGCCGTCCCAGCGCGCCTCCTTCCCCTGG CAGCAGCAGCAGCAGCAGCAGCAGCCGGGCGGAGGTGAGGGTGAGGCCGCGGGCGATCAG GAATCCGGTTGGAGTGGGAGCTCCACGCTGCAGTCCATCGTGGATTACTTCGACTTCGAC TACGATTCCTCGGATGGTGATGGCGATGGCGATGGCGATGGCGTCGTGGTCGGCGGCGAA GCGGCCGAGGCCCAGGAGGATGGGCCGCGTCCCGAGCCGAGCTTCCTTCTCGGGAGCCGG CCGGTGTCAGCGCCGTGGATGCACGGGGAAGAAGAGCCCATGACGAACCAATTGGTTTCT GACGAGGAAGGGTTGGATGGGGATGGTGCTTCCGAGGATGAGATGGGTTTAGTTGATGGA GACGGAGACGAAGACGAAGATTTGGGGAGTGAGGAGGAGACGCTAAGTGAGAGCTCAGAC GGGGAATTCTCCGAGGATTATGCAGCACCGGCCGCAAATTCTTCTTCTATGATGGATTCG GTACTGGACCATGTTTCTTCAGGTGGTGGGTTTTATAGAGGTACTAGGCGGAGTAGCGTA AATTCAATTGTTAACACAATGAGGAATTCGATGGAGGAAAGTAGTAGAAATGCTGCGATT GAGTGTCCCGAGACCGAGGATTTTGTCCAGAAGCTCGGTCCTGTGCTCCTCCCATGGGAG AGGGAGGGGGATGTCGATAGGCCGAGAAAGCGCAGCAACACGGAGCTGGCTGAGAGGACT ATCCCAGAGCACGAGCTGCGGAGGCTTAGAGATGTGGCATTGAGGATGAAGGAGAGGATG AGGGTTGGTCCAGGAGGGGTCACTCAGCTCATTGTGGAGAGCATTCATCAGAAATGGAGG GTGGAAGAGGTGGTCAAGCTGAGATTTGAAGGACCTCCAAGCCTGAACATGAAGAGAACT CATGATATACTAGAGGAGAGGACTGGAGGAATTGTAATATGGAGGTCAGGGAGATCAGTT GTTTTATATAGGGGAATGAACTACAACCTTCGATGTGTGCAGTCGTATACACAAACTACA GAGGTTAATTTTGATAAAAGAGTTAGTAGTAATAGTGTTGAACCTATCCATGTTGAACAT AAATTTCAGAAGTCAGGTGCAGATGGACTGAATCGCTCAGCATATATTGTCAATTCCTCT GAAAAACCTACAGAGACATTTGATATCGATAGCTTCTTGGATCAGTTGGGACCGCGGTAT AAAGATTGGTCTGGTCGTGGCCCTATTCCTGTGGATGCTGACTTGCTTCCTGGTGTTGTT CCTGGTTACAAGACACCATTTAGACTACTTCCTTACATGGTTAAAAGTACCCTTCGGAAT AAGGAAATGACGGCTCTGCGTAGACTTGCAAGGCAAACTGCTCCTCATTTTGCTCTAGGG AGAAACAGGGAACACCAAGGATTAGCTACTGCTATCGTTAAATTGTGGGAGAAAAGTTCT ATTGCAAAGATTGCCATCAAGAGGGGGGTTCCAAATACATGCAATGACAGAATGGCAGAA GAAATCAGGAAATTAACAGGAGGAGTGCTTCTATCGAGGAACAAGGAGTACATTGTCTTC TACAGGGGCAATGATTTCATAACACCTAAAGTAAGGCAAGTCTTGGTGGAGAAGCAAGAG CAAGCAATCACTTGGCAGGATGAGGAAGAATTGGCTCGGCTTAAAGCATCAGCCTCGATC AGTGTCAAACCCAAAGTATTTAAAAATCCCCCAGTTGCTGGCACTCTCGCGGAAACTAGA GAGGCAAAATCTCGATGGGGAGATTCCATTAATGCTGAGCTCAGGAAAAAGGAGAAGAAT CACATGATTCTTACAAAACATACCTCTCTTTTGAGGAACTTGAAGAGAAAATTGATTTTG GCAAAAACAAAGGTCATAAAAGCAGAAAAGGCCTTGGCTAAAGTTCAAGAATTTCTCTCT CCAGCAGAGCTTCCAACTGATTTGGAAACTGTTACAGATGAGGAACGCTTCTTACTTCGC AGAATTGGCCTGAAAATGAAGGCCTTTCTAATGCTTGGAAGACGAGAAGTTTTTGATGGA ACAGTACAGAACATGCACTTGCATTGGAAGCATCGAGAATTAGTCAAGGTTCTTGTAAAG GGGAAGAGCTTTCCACAAGTAAAACATATTGCAATATCTCTGGAAGCTGAAAGTGGAGGA GTGCTCATTTCAGTTGATAAGACGACAAAAGGATATGCAATCATTTTGTACCGGGGTAAG AACTACAAGACGCCCCAAATTTTGAAGCCTCGAAACCTATTGTCAAGGAGAAAAGCATTG GCACGGTCTATAGAGCTCCAAAGGCGGGAGGGATTAAATCATCATATCTCAAATCTGCGA GACAAGATCTGGAAGCTGAAGTCTCAACTTGTACGAATGCAAGTTGCTGGGGAAAAACCA GATGCGGAGTTACTTCAAACAGTTGAGGCTGATTTGTCTAAAGATGACGATAAAATAGAG GATGAAGGAGAGGAGGCCTACCTGCAAACTTACATCAGTGAGGATGAAGAGGAACCTGAG GATGATCAGAATGAATATCTCTGA

Peptide Sequence

PEP ID	Os09t0363100-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:11880515:11885069:1 gene:Os09g0363100 transcript:Os09t0363100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Albino Leaf 2 description:Chloroplast group IIA intron splicing factor CRS1, Splicing of chloroplast group I and II introns, Chloroplast development (Os09t0363100-01)
Sequence	MALLFPPPPHALSPKPPFPSTLRSTRSLRLRRATAAAAAAGAGVSSSSPSTSSPEKAPAL DVASGKRGGKKRRSLKPSFEKQAIRRWSARAPSQRASFPWQQQQQQQQPGGGEGEAAGDQ ESGWSGSSTLQSIVDYFDFDYDSSDGDGDGDGDGVVVGGEAAEAQEDGPRPEPSFLLGSR PVSAPWMHGEEEPMTNQLVSDEEGLDGDGASEDEMGLVDGDGDEDEDLGSEEETLSESSD GEFSEDYAAPAANSSSMMDSVLDHVSSGGGFYRGTRRSSVNSIVNTMRNSMEESSRNAAI ECPETEDFVQKLGPVLLPWEREGDVDRPRKRSNTELAERTIPEHELRRLRDVALRMKERM RVGPGGVTQLIVESIHQKWRVEEVVKLRFEGPPSLNMKRTHDILEERTGGIVIWRSGRSV VLYRGMNYNLRCVQSYTQTTEVNFDKRVSSNSVEPIHVEHKFQKSGADGLNRSAYIVNSS EKPTETFDIDSFLDQLGPRYKDWSGRGPIPVDADLLPGVVPGYKTPFRLLPYMVKSTLRN KEMTALRRLARQTAPHFALGRNREHQGLATAIVKLWEKSSIAKIAIKRGVPNTCNDRMAE EIRKLTGGVLLSRNKEYIVFYRGNDFITPKVRQVLVEKQEQAITWQDEEELARLKASASI SVKPKVFKNPPVAGTLAETREAKSRWGDSINAELRKKEKNHMILTKHTSLLRNLKRKLIL AKTKVIKAEKALAKVQEFLSPAELPTDLETVTDEERFLLRRIGLKMKAFLMLGRREVFDG TVQNMHLHWKHRELVKVLVKGKSFPQVKHIAISLEAESGGVLISVDKTTKGYAIILYRGK NYKTPQILKPRNLLSRRKALARSIELQRREGLNHHISNLRDKIWKLKSQLVRMQVAGEKP DAELLQTVEADLSKDDDKIEDEGEEAYLQTYISEDEEEPEDDQNEYL

Transcript Sequence

Transcript ID	Os09t0363100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:11880515:11885069:1 gene:Os09g0363100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Albino Leaf 2 description:Chloroplast group IIA intron splicing factor CRS1, Splicing of chloroplast group I and II introns, Chloroplast development (Os09t0363100-01)
Sequence	TCGGAGCTCCTCTCCTCGCCTCCAATGGCGCTGCTCTTCCCACCACCACCCCACGCGCTC TCCCCCAAACCCCCCTTCCCCTCCACTCTCCGCTCCACGAGGTCACTGCGTCTCCGCCGC GCCACCGCCGCCGCCGCCGCCGCCGGGGCCGGAGTCTCCTCCTCTTCCCCCTCGACCTCC TCGCCGGAGAAGGCCCCGGCGCTGGACGTCGCCAGCGGGAAGAGGGGTGGTAAGAAGAGG AGGTCCCTGAAGCCGAGCTTCGAGAAGCAGGCCATCCGCCGCTGGTCCGCGAGGGCGCCG TCCCAGCGCGCCTCCTTCCCCTGGCAGCAGCAGCAGCAGCAGCAGCAGCCGGGCGGAGGT GAGGGTGAGGCCGCGGGCGATCAGGAATCCGGTTGGAGTGGGAGCTCCACGCTGCAGTCC ATCGTGGATTACTTCGACTTCGACTACGATTCCTCGGATGGTGATGGCGATGGCGATGGC GATGGCGTCGTGGTCGGCGGCGAAGCGGCCGAGGCCCAGGAGGATGGGCCGCGTCCCGAG CCGAGCTTCCTTCTCGGGAGCCGGCCGGTGTCAGCGCCGTGGATGCACGGGGAAGAAGAG CCCATGACGAACCAATTGGTTTCTGACGAGGAAGGGTTGGATGGGGATGGTGCTTCCGAG GATGAGATGGGTTTAGTTGATGGAGACGGAGACGAAGACGAAGATTTGGGGAGTGAGGAG GAGACGCTAAGTGAGAGCTCAGACGGGGAATTCTCCGAGGATTATGCAGCACCGGCCGCA AATTCTTCTTCTATGATGGATTCGGTACTGGACCATGTTTCTTCAGGTGGTGGGTTTTAT AGAGGTACTAGGCGGAGTAGCGTAAATTCAATTGTTAACACAATGAGGAATTCGATGGAG GAAAGTAGTAGAAATGCTGCGATTGAGTGTCCCGAGACCGAGGATTTTGTCCAGAAGCTC GGTCCTGTGCTCCTCCCATGGGAGAGGGAGGGGGATGTCGATAGGCCGAGAAAGCGCAGC AACACGGAGCTGGCTGAGAGGACTATCCCAGAGCACGAGCTGCGGAGGCTTAGAGATGTG GCATTGAGGATGAAGGAGAGGATGAGGGTTGGTCCAGGAGGGGTCACTCAGCTCATTGTG GAGAGCATTCATCAGAAATGGAGGGTGGAAGAGGTGGTCAAGCTGAGATTTGAAGGACCT CCAAGCCTGAACATGAAGAGAACTCATGATATACTAGAGGAGAGGACTGGAGGAATTGTA ATATGGAGGTCAGGGAGATCAGTTGTTTTATATAGGGGAATGAACTACAACCTTCGATGT GTGCAGTCGTATACACAAACTACAGAGGTTAATTTTGATAAAAGAGTTAGTAGTAATAGT GTTGAACCTATCCATGTTGAACATAAATTTCAGAAGTCAGGTGCAGATGGACTGAATCGC TCAGCATATATTGTCAATTCCTCTGAAAAACCTACAGAGACATTTGATATCGATAGCTTC TTGGATCAGTTGGGACCGCGGTATAAAGATTGGTCTGGTCGTGGCCCTATTCCTGTGGAT GCTGACTTGCTTCCTGGTGTTGTTCCTGGTTACAAGACACCATTTAGACTACTTCCTTAC ATGGTTAAAAGTACCCTTCGGAATAAGGAAATGACGGCTCTGCGTAGACTTGCAAGGCAA ACTGCTCCTCATTTTGCTCTAGGGAGAAACAGGGAACACCAAGGATTAGCTACTGCTATC GTTAAATTGTGGGAGAAAAGTTCTATTGCAAAGATTGCCATCAAGAGGGGGGTTCCAAAT ACATGCAATGACAGAATGGCAGAAGAAATCAGGAAATTAACAGGAGGAGTGCTTCTATCG AGGAACAAGGAGTACATTGTCTTCTACAGGGGCAATGATTTCATAACACCTAAAGTAAGG CAAGTCTTGGTGGAGAAGCAAGAGCAAGCAATCACTTGGCAGGATGAGGAAGAATTGGCT CGGCTTAAAGCATCAGCCTCGATCAGTGTCAAACCCAAAGTATTTAAAAATCCCCCAGTT GCTGGCACTCTCGCGGAAACTAGAGAGGCAAAATCTCGATGGGGAGATTCCATTAATGCT GAGCTCAGGAAAAAGGAGAAGAATCACATGATTCTTACAAAACATACCTCTCTTTTGAGG AACTTGAAGAGAAAATTGATTTTGGCAAAAACAAAGGTCATAAAAGCAGAAAAGGCCTTG GCTAAAGTTCAAGAATTTCTCTCTCCAGCAGAGCTTCCAACTGATTTGGAAACTGTTACA GATGAGGAACGCTTCTTACTTCGCAGAATTGGCCTGAAAATGAAGGCCTTTCTAATGCTT GGAAGACGAGAAGTTTTTGATGGAACAGTACAGAACATGCACTTGCATTGGAAGCATCGA GAATTAGTCAAGGTTCTTGTAAAGGGGAAGAGCTTTCCACAAGTAAAACATATTGCAATA TCTCTGGAAGCTGAAAGTGGAGGAGTGCTCATTTCAGTTGATAAGACGACAAAAGGATAT GCAATCATTTTGTACCGGGGTAAGAACTACAAGACGCCCCAAATTTTGAAGCCTCGAAAC CTATTGTCAAGGAGAAAAGCATTGGCACGGTCTATAGAGCTCCAAAGGCGGGAGGGATTA AATCATCATATCTCAAATCTGCGAGACAAGATCTGGAAGCTGAAGTCTCAACTTGTACGA ATGCAAGTTGCTGGGGAAAAACCAGATGCGGAGTTACTTCAAACAGTTGAGGCTGATTTG TCTAAAGATGACGATAAAATAGAGGATGAAGGAGAGGAGGCCTACCTGCAAACTTACATC AGTGAGGATGAAGAGGAACCTGAGGATGATCAGAATGAATATCTCTGAATCTTAACTGGC GAAACTTCGGTGAGTCCGGGAGAAAAGTCAGTAGTAAAGCATTGCATGTTCATATTGTGA AATTTCTGCAGTGTTACTCAAGAGGCAGGCAGTTTTAAGATTCATCTATGGATTATTGCC AACACAAATTGACCTGCAACAGCATTAGTGGCCTTTGTCCATTGCGAGATCAACGACAAA GGATGTAGCTTGAGTGTGTGTGGATTGTGGTGCATGGTCTGCAGTTGCTGCCATTCCTTT TTTTTTTTTTTTTTACCTTGGCTACTTCCATAGCTCCATCCATGCCTGATGCCCTGATGG CCTTCTACATCCTGCAGATTTGAAAAGGTTTCTGTCAACACACGATCAAGTTGTCTGCTG TGCAGAAGTTTGCAAAGTGGCAGTGTATAAATCAGGCTCGTGTGAGTTCGTTTCATTTTG CAGAAGCTGTAATTATATCATGCCATTTT