Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0346900-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:10872551:10877953:-1 gene:Os09g0346900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0346900-01)
Sequence

ATGGAGCGGCGATCGAGCGTTCGCTTCGCGCCATCCGAGATTGCAAGGATGGAGAAGTTG
GTTACACATAAAAAGGAACAAGTCTTGGATGAAATTTTCTGCCGGAAGCTCGCAGAAGAA
TTTAATTGTTCTCCAGGCCGAGTTGGAAGTAAAGCACTACAGGCTGTGCAGGTTCAAGAA
TGGTTCCGTCAAAAGTTCCCTGCATCAACTGTTATACCTCCTTGTTTGCCTACTGGCTCT
GAAGAAAAGGCTTTAGCCTCCCAAGCAAGTGCACCGGTTTCTGAAGAAAAGCCTCCATCA
TCTGAAGAAAATGCTTTAGCTGTTGATACAAGCATTTCAAATGATATAGGCGAGGTTTCG
CCGGATTTACCTATAGACAACATAGATAAGCTTCCTGAAATTGAAGACATGCAGTTCGAG
GCTAGGTCTTCAAAGGATTTTGCTTGGTATGATATCGCCACTTTCTTAGCATACAGGAAG
TTAAGTTCTGGTGAATTTGAAGTCCGAGTGAGATTTCAAGGATTTGGGGCTGAAGAGGAT
GAATGGATCAATGTCCGGAAGGCTATCCGCCTGCAATCCATCCCGTTGGAATCATCAGAA
TGCAAACTCATCAGGGAAGGAGACCTTGTCCTCTGTTTCAAGGAGAGCAATGATGAAGCA
TTGCATTTCGATGCGCATGTTCTGGAAATCCAGCGGAAACAACATGATATAAGGGGGTGC
AGATGTGTCTTCCTTGTCGAATACGACCATGATGGAACCCAGGAGAGGGTGAACCTGAGA
AGATTGTCCCGGCGGCCAAAGCACTCCTGA

Peptide Sequence

PEP ID

Os09t0346900-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:10872551:10877953:-1 gene:Os09g0346900 transcript:Os09t0346900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0346900-01)
Sequence

MERRSSVRFAPSEIARMEKLVTHKKEQVLDEIFCRKLAEEFNCSPGRVGSKALQAVQVQE
WFRQKFPASTVIPPCLPTGSEEKALASQASAPVSEEKPPSSEENALAVDTSISNDIGEVS
PDLPIDNIDKLPEIEDMQFEARSSKDFAWYDIATFLAYRKLSSGEFEVRVRFQGFGAEED
EWINVRKAIRLQSIPLESSECKLIREGDLVLCFKESNDEALHFDAHVLEIQRKQHDIRGC
RCVFLVEYDHDGTQERVNLRRLSRRPKHS

Transcript Sequence

Transcript ID

Os09t0346900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:10872551:10877953:-1 gene:Os09g0346900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0346900-01)
Sequence

CTGCAAGTTGGGAGGAGGGCGTCTTCCCCGTTCTTCCGGCGGCGGAGACCTCGCCGGCGG
CGAGAAATGGAGCGGCGATCGAGCGTTCGCTTCGCGCCATCCGAGATTGCAAGGATGGAG
AAGTTGGTTACACATAAAAAGGAACAAGTCTTGGATGAAATTTTCTGCCGGAAGCTCGCA
GAAGAATTTAATTGTTCTCCAGGCCGAGTTGGAAGTAAAGCACTACAGGCTGTGCAGGTT
CAAGAATGGTTCCGTCAAAAGTTCCCTGCATCAACTGTTATACCTCCTTGTTTGCCTACT
GGCTCTGAAGAAAAGGCTTTAGCCTCCCAAGCAAGTGCACCGGTTTCTGAAGAAAAGCCT
CCATCATCTGAAGAAAATGCTTTAGCTGTTGATACAAGCATTTCAAATGATATAGGCGAG
GTTTCGCCGGATTTACCTATAGACAACATAGATAAGCTTCCTGAAATTGAAGACATGCAG
TTCGAGGCTAGGTCTTCAAAGGATTTTGCTTGGTATGATATCGCCACTTTCTTAGCATAC
AGGAAGTTAAGTTCTGGTGAATTTGAAGTCCGAGTGAGATTTCAAGGATTTGGGGCTGAA
GAGGATGAATGGATCAATGTCCGGAAGGCTATCCGCCTGCAATCCATCCCGTTGGAATCA
TCAGAATGCAAACTCATCAGGGAAGGAGACCTTGTCCTCTGTTTCAAGGAGAGCAATGAT
GAAGCATTGCATTTCGATGCGCATGTTCTGGAAATCCAGCGGAAACAACATGATATAAGG
GGGTGCAGATGTGTCTTCCTTGTCGAATACGACCATGATGGAACCCAGGAGAGGGTGAAC
CTGAGAAGATTGTCCCGGCGGCCAAAGCACTCCTGATGGCTTGTGTCAAACTGTCAAATA
CACATCTGCCTCTTGCCTCTTGCCGTATGCGCTAATGCTGAACTAACAGGAACTCCGAAC
CTAGTTAGGGGCTAAACTTTTTGCTTGGTTCAGAACTCATTGATGAGTACAGTAACCCCC
CCCCCCCCCCGGTGATGGTACATTTCAACCCTCTTTGGCAAATTCCGAACCTAGTTAGGG
GCTGTTCGTGGGGCTGCTTGATGGCCAAATTTTGTGCAGTAATTTGGGAGGAAAAGAGGG
GGATTAGTCAAGACTGAACTGAAGAGCATATTACCTCCAAGAACTAACAGGATTGGACTT
TTTAAATGCGTTGTGTTGGGTGTGAGATTCCACATTTCCATGGAAAATTCGTAATGCTCA
GCGTTCTCGGCTTGGGTGATTTT