Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0346600-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:10849769:10852856:-1 gene:Os09g0346600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glucose/ribitol dehydrogenase family protein. (Os09t0346600-01)
Sequence

ATGGACCGCGAAGCGCTCCGCATGGTGTGCTCGCGGGAGTTCTGGCGGATGGCCGTCCTG
TGGACCGTCTCCCTCCTCTACTCCTACATCCTCCTCTTCTTCCTCCGCCGCGGCGCCCCC
GTCCCTCGCCTCCGACCTATGCCCGAGCCCGACGACGACGCCGCTCGTCGCCGCCGCCGC
CGCCCCGTCTGCGTGATTACTGGGGCGACGTCGGGGCTGGGCAAAGCGGCGGCGGCGGCG
CTGGCGCGGGAGGGGTACCACGTCATCCTCGCTGGGCGTTCTTCACAATTGTTATCTGAG
ACTGTTCAACAAATTCGGGATCAACAACCTGATGCCCATCTTGAAGCATTTCAAATCGAC
TTGTCATCCTACAAGTCAATAAAGAAGTTTGAAACTTCACTGAATCAGTGGATCAAGGAC
TCAAATATGGAGCACTCTATTCAGCTTTTGGTCAATAACGCTGGGATCCTAGCAAAGTCA
TATCGAATTACAGAGGACGGTCTTGATGAAATGATTCAGGCAAACTACATTGGTCCATTT
GTCCTGACCAACATTCTGTTACCATTGCTCAAGAACAGCTCAACACCTTCTCGGGTGGTT
AATCTAACGTCTTTCACACACAGATGTGTGTCAGAAATTAACTTGTCTGAGAAAGGATTG
AGCGGAGTAAGGTTTGGTCATTGGCCAGCGAGGAGAAGCTATCTCTTAGCTTCTACTTAT
GAGTATACCAAATTTTGTTTACTGATGTTCTCATACGAGCTTCATCGACAACTTCACTTA
TCTTCTGGTGTCTCCGTCATGGCTGCGGATCCAGGTGTAGTACAGACAGGCATAATGCGG
GAGCTTCCTCCATGTCTTTCTTGGCTTGCGCTTTCTGTTCTGCGCCTCCTGAATCTCCTA
CAACAACCTGATACGGGAGTTGATGCTGTCCTTGATGCCGCTTTGGCACCACCTGACTCA
TCTGGAAAGTATTTCTTTGGAGGGAAAGGAAGGACCATAACGTCTTCTCAGTTGTCATAC
AACGTTGAAGTGGCCAAGAAGCTATGGGCAGAATCTTTAGCATTGTTCAATGAGCTACAG
AATAGAGTATGTGAACTGAGGACTAGCTGA

Peptide Sequence

PEP ID

Os09t0346600-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:10849769:10852856:-1 gene:Os09g0346600 transcript:Os09t0346600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glucose/ribitol dehydrogenase family protein. (Os09t0346600-01)
Sequence

MDREALRMVCSREFWRMAVLWTVSLLYSYILLFFLRRGAPVPRLRPMPEPDDDAARRRRR
RPVCVITGATSGLGKAAAAALAREGYHVILAGRSSQLLSETVQQIRDQQPDAHLEAFQID
LSSYKSIKKFETSLNQWIKDSNMEHSIQLLVNNAGILAKSYRITEDGLDEMIQANYIGPF
VLTNILLPLLKNSSTPSRVVNLTSFTHRCVSEINLSEKGLSGVRFGHWPARRSYLLASTY
EYTKFCLLMFSYELHRQLHLSSGVSVMAADPGVVQTGIMRELPPCLSWLALSVLRLLNLL
QQPDTGVDAVLDAALAPPDSSGKYFFGGKGRTITSSQLSYNVEVAKKLWAESLALFNELQ
NRVCELRTS

Transcript Sequence

Transcript ID

Os09t0346600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:10849769:10852856:-1 gene:Os09g0346600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glucose/ribitol dehydrogenase family protein. (Os09t0346600-01)
Sequence

AATCCGAACCGTCCGTTGTGGCCCCTCTTTCCCGGTGGCAACTTGACAACTCGCCGAGCA
GCCGCCGCCGGCGGCCATGGACCGCGAAGCGCTCCGCATGGTGTGCTCGCGGGAGTTCTG
GCGGATGGCCGTCCTGTGGACCGTCTCCCTCCTCTACTCCTACATCCTCCTCTTCTTCCT
CCGCCGCGGCGCCCCCGTCCCTCGCCTCCGACCTATGCCCGAGCCCGACGACGACGCCGC
TCGTCGCCGCCGCCGCCGCCCCGTCTGCGTGATTACTGGGGCGACGTCGGGGCTGGGCAA
AGCGGCGGCGGCGGCGCTGGCGCGGGAGGGGTACCACGTCATCCTCGCTGGGCGTTCTTC
ACAATTGTTATCTGAGACTGTTCAACAAATTCGGGATCAACAACCTGATGCCCATCTTGA
AGCATTTCAAATCGACTTGTCATCCTACAAGTCAATAAAGAAGTTTGAAACTTCACTGAA
TCAGTGGATCAAGGACTCAAATATGGAGCACTCTATTCAGCTTTTGGTCAATAACGCTGG
GATCCTAGCAAAGTCATATCGAATTACAGAGGACGGTCTTGATGAAATGATTCAGGCAAA
CTACATTGGTCCATTTGTCCTGACCAACATTCTGTTACCATTGCTCAAGAACAGCTCAAC
ACCTTCTCGGGTGGTTAATCTAACGTCTTTCACACACAGATGTGTGTCAGAAATTAACTT
GTCTGAGAAAGGATTGAGCGGAGTAAGGTTTGGTCATTGGCCAGCGAGGAGAAGCTATCT
CTTAGCTTCTACTTATGAGTATACCAAATTTTGTTTACTGATGTTCTCATACGAGCTTCA
TCGACAACTTCACTTATCTTCTGGTGTCTCCGTCATGGCTGCGGATCCAGGTGTAGTACA
GACAGGCATAATGCGGGAGCTTCCTCCATGTCTTTCTTGGCTTGCGCTTTCTGTTCTGCG
CCTCCTGAATCTCCTACAACAACCTGATACGGGAGTTGATGCTGTCCTTGATGCCGCTTT
GGCACCACCTGACTCATCTGGAAAGTATTTCTTTGGAGGGAAAGGAAGGACCATAACGTC
TTCTCAGTTGTCATACAACGTTGAAGTGGCCAAGAAGCTATGGGCAGAATCTTTAGCATT
GTTCAATGAGCTACAGAATAGAGTATGTGAACTGAGGACTAGCTGAACTAACTTGTGAAA
ATTATGAGGTTACTGAATTTCAGGTTTACTCTGTTCGATGGGCAATAGTTTCAGGCCTTT
TCAGT