Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0346500-04
CDS Infomation	cds chromosome:IRGSP-1.0:9:10845779:10847012:1 gene:Os09g0346500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHLOROPHYLL A/B BINDING PROTEIN 1R description:Similar to Chlorophyll a-b binding protein, chloroplast precursor (LHCII type I CAB) (LHCP). (Os09t0346500-04)
Sequence	ATGGCCGCGGCCACCATGGCGCTCTCCTCCCCGGTGATGGCCCGCGCGGCGCCGTCGACC TCCTCCGCGCTCTTCGGCGAGGCGCGGATCACCATGCGCAAGACCGCCGCGAAGCCCAAG CCGGCGGCGTCGTCGGGGAGCCCGTGGTACGGCGCCGACCGCGTCCTCTACCTCGGCCCG CTCTCCGGCGAGCCGCCGAGCTACCTCACCGGCGAGTTCCCGGGCGACTACGGGTGGGAC ACCGCGGGGCTCTCCGCCGACCCGGAGACGTTCGCCAAGAACCGGGAGCTGGAGGTGATC CACTCCCGGTGGGCGATGCTGGGCGCGCTCGGCTGCGTCTTCCCGGAGCTCCTCGCCCGG AACGGCGTCAAGTTCGGCGAGGCCGTGTGGTTCAAGGCGGGCTCGCAGATCTTCAGCGAG GGCGGGCTCGACTACCTCGGCAACCCGAGCCTGATCCACGCGCAGAGCATCCTCGCCATC TGGGCGGTGCAGGTGGTGCTCATGGGCGCCGTCGAGGGGTACCGCATCGCCGGCGGGCCG CTCGGCGAGGTCGTCGACCCGCTCTACCCCGGCGGCGCCTTCGACCCGCTCGGCCTCGCC GATGACCCCGAGGCGTTCGCGGAGCTCAAGGTGAAGGAGATCAAGAACGGCCGCCTCGCC ATGTTCTCCATGTTCGGCTTCTTCGTCCAGGCCATCGTCACCGGCAAGGGCCCCCTCGAG AACCTCGCCGACCACCTCGCCGACCCCGTCAACAACAACGCCTGGGCGTACGCCACCAAC TTCGTCCCCGGCAAGTGA

Peptide Sequence

PEP ID	Os09t0346500-04
PEP Infomation	pep chromosome:IRGSP-1.0:9:10845779:10847012:1 gene:Os09g0346500 transcript:Os09t0346500-04 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHLOROPHYLL A/B BINDING PROTEIN 1R description:Similar to Chlorophyll a-b binding protein, chloroplast precursor (LHCII type I CAB) (LHCP). (Os09t0346500-04)
Sequence	MAAATMALSSPVMARAAPSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGP LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGP LGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE NLADHLADPVNNNAWAYATNFVPGK

Transcript Sequence

Transcript ID	Os09t0346500-04
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:10845779:10847012:1 gene:Os09g0346500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHLOROPHYLL A/B BINDING PROTEIN 1R description:Similar to Chlorophyll a-b binding protein, chloroplast precursor (LHCII type I CAB) (LHCP). (Os09t0346500-04)
Sequence	AACTCACACTCGCTCGCTCATCGCCATCTCTCTCAGCTCTCACAGCTCACTGCATCAATG GCCGCGGCCACCATGGCGCTCTCCTCCCCGGTGATGGCCCGCGCGGCGCCGTCGACCTCC TCCGCGCTCTTCGGCGAGGCGCGGATCACCATGCGCAAGACCGCCGCGAAGCCCAAGCCG GCGGCGTCGTCGGGGAGCCCGTGGTACGGCGCCGACCGCGTCCTCTACCTCGGCCCGCTC TCCGGCGAGCCGCCGAGCTACCTCACCGGCGAGTTCCCGGGCGACTACGGGTGGGACACC GCGGGGCTCTCCGCCGACCCGGAGACGTTCGCCAAGAACCGGGAGCTGGAGGTGATCCAC TCCCGGTGGGCGATGCTGGGCGCGCTCGGCTGCGTCTTCCCGGAGCTCCTCGCCCGGAAC GGCGTCAAGTTCGGCGAGGCCGTGTGGTTCAAGGCGGGCTCGCAGATCTTCAGCGAGGGC GGGCTCGACTACCTCGGCAACCCGAGCCTGATCCACGCGCAGAGCATCCTCGCCATCTGG GCGGTGCAGGTGGTGCTCATGGGCGCCGTCGAGGGGTACCGCATCGCCGGCGGGCCGCTC GGCGAGGTCGTCGACCCGCTCTACCCCGGCGGCGCCTTCGACCCGCTCGGCCTCGCCGAT GACCCCGAGGCGTTCGCGGAGCTCAAGGTGAAGGAGATCAAGAACGGCCGCCTCGCCATG TTCTCCATGTTCGGCTTCTTCGTCCAGGCCATCGTCACCGGCAAGGGCCCCCTCGAGAAC CTCGCCGACCACCTCGCCGACCCCGTCAACAACAACGCCTGGGCGTACGCCACCAACTTC GTCCCCGGCAAGTGAAGTGGGGGACCGTAGCTTAGCAGTGGTTAATTGTGGTTGGATGGA TTTGTGGCCAGCGAGTTCGTTGTCTTTGGGTTGGGGAAGATGGGTTTAGTGCGACGAGAT GATGATCGAGTTGGTGTTGTGTACACTAAGAAGATGAAGAAGAAGATGATGTTTTTGCAA TAATGATTTTATTCGTTTCCCAACTAATGGTCTAGGTACTTATCCGTGGTGTTATTCTGA TTAGCGGATTTCTCATCTCTATTAGATCGGAAACAAATACTCCCTCGATCCCAAAATATA ACCATTTCTGGCTATGTATAGTGTAAATATGTAGTCTAAATTGTTTATATTGTGGCATGG AAGGATTAATTAGTGCTTTAAATTTACGTATACA