Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0345500-00
CDS Infomation

cds chromosome:IRGSP-1.0:9:10801029:10802249:1 gene:Os09g0345500 gene_biotype:protein_coding transcript_biotype:protein_coding description:HSP20-like chaperone domain containing protein. (Os09t0345500-00)
Sequence

ATGTCCATGGTTACATCTTTCAACCTCCTGATGAGCCAGACGGCGCCTCCGGTACTGAAA
GCTCCCTTTGGTGCAGCCCTGCGATCCGCAGGCAAGCCAGCAGCGGCATTGGCCCTCCAA
AGGAAGTCTCCGCGTCTTTTGGTGCGTGCTAATAATTCTCCGAAAAGCCCTGCTGATACT
GGGCATCCCTTTGGCATCGCACCCTTTGCCCTGGTGCACCCCAAGTTCCCACCGACGTCA
GGCAACAGGTGGAGGATCACGGAGGACGACGACTACGTGAAGCTGTGGTTCCACGTCGGG
GAGATAGACAGGGAGAAGCTCAAGGTTCGGATCGAGCACGACACGGTGCTCCTCGTCAGC
TACGGCGGCGCCGGCGACGAGACGTCGACGCCGGCGAACTCCCTCGACGTGCGCCTGCTG
CTGCCGAACAAGCCGTACGACACGGCCAAGGTCGAGGCCGAGCTCACCTTCGGGACGCTG
CTGGTGACCGTCGCCAAGCGCAAGCCCCTGCAGGGGCGTGACAAGGTCGGAATCCCGATC
ACTCCGGCTCCAAGCAATGAGAAAACCACTACCGCCACCGGACAAACCGGTAGCGAGACC
TAG

Peptide Sequence

PEP ID

Os09t0345500-00
PEP Infomation

pep chromosome:IRGSP-1.0:9:10801029:10802249:1 gene:Os09g0345500 transcript:Os09t0345500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:HSP20-like chaperone domain containing protein. (Os09t0345500-00)
Sequence

MSMVTSFNLLMSQTAPPVLKAPFGAALRSAGKPAAALALQRKSPRLLVRANNSPKSPADT
GHPFGIAPFALVHPKFPPTSGNRWRITEDDDYVKLWFHVGEIDREKLKVRIEHDTVLLVS
YGGAGDETSTPANSLDVRLLLPNKPYDTAKVEAELTFGTLLVTVAKRKPLQGRDKVGIPI
TPAPSNEKTTTATGQTGSET

Transcript Sequence

Transcript ID

Os09t0345500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:10801029:10802249:1 gene:Os09g0345500 gene_biotype:protein_coding transcript_biotype:protein_coding description:HSP20-like chaperone domain containing protein. (Os09t0345500-00)
Sequence

CTAGCTAGCACACCAAAACTAACAGATTTAGTACATAAACTGAGCAGCAATGTCCATGGT
TACATCTTTCAACCTCCTGATGAGCCAGACGGCGCCTCCGGTACTGAAAGCTCCCTTTGG
TGCAGCCCTGCGATCCGCAGGCAAGCCAGCAGCGGCATTGGCCCTCCAAAGGAAGTCTCC
GCGTCTTTTGGTGCGTGCTAATAATTCTCCGAAAAGCCCTGCTGATACTGGGCATCCCTT
TGGCATCGCACCCTTTGCCCTGGTGCACCCCAAGTTCCCACCGACGTCAGGCAACAGGTG
GAGGATCACGGAGGACGACGACTACGTGAAGCTGTGGTTCCACGTCGGGGAGATAGACAG
GGAGAAGCTCAAGGTTCGGATCGAGCACGACACGGTGCTCCTCGTCAGCTACGGCGGCGC
CGGCGACGAGACGTCGACGCCGGCGAACTCCCTCGACGTGCGCCTGCTGCTGCCGAACAA
GCCGTACGACACGGCCAAGGTCGAGGCCGAGCTCACCTTCGGGACGCTGCTGGTGACCGT
CGCCAAGCGCAAGCCCCTGCAGGGGCGTGACAAGGTCGGAATCCCGATCACTCCGGCTCC
AAGCAATGAGAAAACCACTACCGCCACCGGACAAACCGGTAGCGAGACCTAG