Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0334800-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:10152941:10157508:1 gene:Os09g0334800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to protein kinase. (Os09t0334800-01)
Sequence	ATGAGCTCTCATCGCCTTCTATTCACACAGCTTCACCTCTACAACTTGCTGTTGCTCATC CATGTTCACCATGCTACCTCACTCAACTTCAGATTTGACTTCTCCGAGCCTGGTTCGTAC TGTACCCCTGGTTCAGAGATCGCCTGTGCTGGCGATGCCTACCCCTACGCCCATACGATT GAGCTGACAAAGACCGACATCAGCGACAGAAACCTCTGCAGCATCGGCCGCGTGTGGTAT GCACGGCCGGTGCCGCTCTGGAACAACACCACCGGTGAGGTGGCCAGCTTCAGGACCACC TTCTCCTTCCAAATCAAGCCGGCCAACCTGGACGTCAGTGCTGACGGTATGGCCTTCTTC CTCGGCCATTACCCGTCAGGCATCCCTCATCGCAGCTATGGCGGAAACCTCGGCCTCTTC AATGGCAGCAACAACAAGAACGCAACGGGCACCGCTAGGATCGTGGCAGTCGAGTTTGAC ACCTACATGAACAAGGAATGGGAGAAGGATGGCAACCATGTCGGGATCGATGTTAACTCC ATCGTCTCTGTCGCGGCAACCTCACCGGACAAGAACTTAGCAAGCGGCACCACCATGACT GCCGATATCAGCTACGACAGCAGTGCAGAGATACTGGCAGTCACCTTCTGGATCAACGGA ACCTCCTACCATGTCAGTGCCAGCGTTGATATGAGAAGATGCTTGCCTGAGGTGGTCGCT GTTGGTTTCTCTGCTTCTACCGGAAGCTCCATTGAAGTACACCGGGTGCTGTCATGGTCA TTCAACTCCACCCTAACATGGATGAATTCTTCAGTAATGCCACCAGGAGCAGCACCTGTG CCCCCAGAAACTATCAGCTCTGAACCAATAATGTCACCAGGAGCAGCACCTGTGCGCACA GAAACTTTGAGCTCCCAATCACAAGGTAAATTACATGGTATAATAGCTATTTCAGTTGCA GTATCCTTTGTGCTGGTATGTGCTTTCATGGGTTTTCTTCTACGACGTCGATTAGTATGG AAGAAATCAAATGAAATCTCTGATGGAGATTGTCAGATTGAACTTGATGAAATTTTTTAT TCAAAAAAGGAACTTGATGAAATTAAGTTTGCAAAAGGTGTTGGCCCCAAAAGGTATCAT TACAGTGAACTAGCTGCTGCGACGGGTAACTTTGCAGAGGAGAAGAAGCTAGGAAGAGGG GGTTTTGGTCATGTTTACCAGGGCTTCCTGAAAACTGATGATCAGGAACGGCTTGTGGCC ATAAAAAAGTTCTCACCAGACTCATCTGCTCAGGGGAGGAAGGAGTTTGAGGCTGAGATC AAAATCATAAGTCGGCTGAGGCATCGGAACCTTGTCCAATTAATAGGATGGTGTGACAGT TGCATGGGACTCCTGATTGTTTATGAGCTCGTATCAGAAGGTAGTCTTGACAAGCATATA TATAAAAATGCGAGGTTGCTAACATGGGCCGAAAGGTACAAGATCATCATTGGCCTTGGC TCTGCACTCCACTACCTTCACCAAGAGTGGGAGCAGTGCGTCGTCCACGGCGACATCAAG CCAAGCAACATCATGCTCGACTCCTCCTACAACACCAAGCTTGGGGACTTTGGCCTGGCG AGGCTCGTCGACCATGGCGCCAAGTCACGGACAACCAAGGTCGTGCTCGGGACCGCCGGG TACATCGACCCAGAGCTCGTCAACACGCGCAGGCCAAGCACTGAGTCCGACGTCTACAGC TTCGGCATCGTCCTCCTCGAGATCGTCTCCGGCCGTCGCCCCGTGGAGGAACCGGACGAC AGCGACGAGCTCTTCGTGCTGTCGAGATGGGTGTGGGACCTCTACAGCAAGAACGCCGTC GTGGAGGCGGTGGACGAGAGGCTCAGGTGCAGCGACGATGGCGACGACGAGCTGCAGATG GAGCGCGTGCTCGCCGTCGGGCTGTGGTGCGCGCACCCTGACCGGAGCGAACGGCCGTCC ATGGCGCAGGCTATGCACGCCCTGCAGTCGGAGGAGGCAAGGTTGCCGGCTCTTCGGCCG CAGATGTACAAGGGTGTGCCATTTCTTGCCATGGGAGAACATAGGTACAGCGATCTTTCA ATTGGCACCACTACCAGCTCCAGTGCCAGTGGAACCGGCTGCACTGCACATTCAGAGCCA ACTAAACTGTAA

Peptide Sequence

PEP ID	Os09t0334800-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:10152941:10157508:1 gene:Os09g0334800 transcript:Os09t0334800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to protein kinase. (Os09t0334800-01)
Sequence	MSSHRLLFTQLHLYNLLLLIHVHHATSLNFRFDFSEPGSYCTPGSEIACAGDAYPYAHTI ELTKTDISDRNLCSIGRVWYARPVPLWNNTTGEVASFRTTFSFQIKPANLDVSADGMAFF LGHYPSGIPHRSYGGNLGLFNGSNNKNATGTARIVAVEFDTYMNKEWEKDGNHVGIDVNS IVSVAATSPDKNLASGTTMTADISYDSSAEILAVTFWINGTSYHVSASVDMRRCLPEVVA VGFSASTGSSIEVHRVLSWSFNSTLTWMNSSVMPPGAAPVPPETISSEPIMSPGAAPVRT ETLSSQSQGKLHGIIAISVAVSFVLVCAFMGFLLRRRLVWKKSNEISDGDCQIELDEIFY SKKELDEIKFAKGVGPKRYHYSELAAATGNFAEEKKLGRGGFGHVYQGFLKTDDQERLVA IKKFSPDSSAQGRKEFEAEIKIISRLRHRNLVQLIGWCDSCMGLLIVYELVSEGSLDKHI YKNARLLTWAERYKIIIGLGSALHYLHQEWEQCVVHGDIKPSNIMLDSSYNTKLGDFGLA RLVDHGAKSRTTKVVLGTAGYIDPELVNTRRPSTESDVYSFGIVLLEIVSGRRPVEEPDD SDELFVLSRWVWDLYSKNAVVEAVDERLRCSDDGDDELQMERVLAVGLWCAHPDRSERPS MAQAMHALQSEEARLPALRPQMYKGVPFLAMGEHRYSDLSIGTTTSSSASGTGCTAHSEP TKL

Transcript Sequence

Transcript ID	Os09t0334800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:10152941:10157508:1 gene:Os09g0334800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to protein kinase. (Os09t0334800-01)
Sequence	ACCCGTGCTCCCCGCCGGCCGCCGGTGGACGGAGCTCTGTGTCAACCGGAGCTCGAGCTG CTTTCCATCACCGGACATGATGAAAGCCTTGATCTGTTGCCGGCAACGTAGTTTCTCTGC CGGCCAACGCGACGGCGCGACATCCCCTAATCACTCTCAATCCATTCTGTGGTAAGGTAG GGCAACCGCAGGTGATTGGAGAGGCACCCTCAAAATCTCAATCCACCCGCCGGCGTACAT CTCCGCTACCACCTGCTGCGCGTGGCGTGATGGCTCCAAGCTAGCTTTCCCCGCCGCGCC CGCCTGAGGATCCACACCACCTGCTCGGCTGTCACGGCTCGCCCCACATCGCGCGCAGGA TGTTCGACGAATTGCCTGACCCGGACAACGTCTCGCCGTTACGCGTCGTTGACCAGACTG CGCCTGCTTCCCCCGGCATGTGCACGCCCACGCCGTGCAGCTCGGGCTTTTGCTACAGCA CGTTCGTCGGGAGTGCTCTGCAGCTCTGGTGCGCATGTCCCGGCGGCGCAGGGTCAGACA GGCGCTCGGGAAATTTACACGGAGAGACATGTTGCAATATCACTGAACATACCGGGTGGA GATCATTTCTGTTCTATATTGTTGGAGGGCGCCCAGGAATTCTTTGATTCATTCAGATTT TACCATCAGGTTGCACAGATTTGGTTTCTGGTTCATTATAATAAGCAATAAAGCAACAAG ATGACCCAAAGGATGAATTCTTTGCATCTCCCATCTCTCCACAGGTACCACCTTTTGGCT CCATTTGCTTGTCTTCTTTGGCCTAACTGGTTTCCTCCACAGCTGCATAGCTCTGTCAGA TTATGTGATAAGACCAATTGCATGTCACTTGAAGCCGGTTATGACTCCACAATGCAACAT TGTTGCAAGCGTTGGACTATGTGATAAGACATATTGCATAGCCTACTATTAATGAATGGG TTTGGGCCAATTATGAAATGCTAATAGTCCGCCATTTGGAAGGCTTCAACCTGGTTAGCC GGCCGGCCAGTCAGACAGCTACCCCGCTGTCTTGCAAAATTATGGCTAGCAGTTCTCCCA AGCATCAGCAGTGGCAGCAATGAGCTCTCATCGCCTTCTATTCACACAGCTTCACCTCTA CAACTTGCTGTTGCTCATCCATGTTCACCATGCTACCTCACTCAACTTCAGATTTGACTT CTCCGAGCCTGGTTCGTACTGTACCCCTGGTTCAGAGATCGCCTGTGCTGGCGATGCCTA CCCCTACGCCCATACGATTGAGCTGACAAAGACCGACATCAGCGACAGAAACCTCTGCAG CATCGGCCGCGTGTGGTATGCACGGCCGGTGCCGCTCTGGAACAACACCACCGGTGAGGT GGCCAGCTTCAGGACCACCTTCTCCTTCCAAATCAAGCCGGCCAACCTGGACGTCAGTGC TGACGGTATGGCCTTCTTCCTCGGCCATTACCCGTCAGGCATCCCTCATCGCAGCTATGG CGGAAACCTCGGCCTCTTCAATGGCAGCAACAACAAGAACGCAACGGGCACCGCTAGGAT CGTGGCAGTCGAGTTTGACACCTACATGAACAAGGAATGGGAGAAGGATGGCAACCATGT CGGGATCGATGTTAACTCCATCGTCTCTGTCGCGGCAACCTCACCGGACAAGAACTTAGC AAGCGGCACCACCATGACTGCCGATATCAGCTACGACAGCAGTGCAGAGATACTGGCAGT CACCTTCTGGATCAACGGAACCTCCTACCATGTCAGTGCCAGCGTTGATATGAGAAGATG CTTGCCTGAGGTGGTCGCTGTTGGTTTCTCTGCTTCTACCGGAAGCTCCATTGAAGTACA CCGGGTGCTGTCATGGTCATTCAACTCCACCCTAACATGGATGAATTCTTCAGTAATGCC ACCAGGAGCAGCACCTGTGCCCCCAGAAACTATCAGCTCTGAACCAATAATGTCACCAGG AGCAGCACCTGTGCGCACAGAAACTTTGAGCTCCCAATCACAAGGTAAATTACATGGTAT AATAGCTATTTCAGTTGCAGTATCCTTTGTGCTGGTATGTGCTTTCATGGGTTTTCTTCT ACGACGTCGATTAGTATGGAAGAAATCAAATGAAATCTCTGATGGAGATTGTCAGATTGA ACTTGATGAAATTTTTTATTCAAAAAAGGAACTTGATGAAATTAAGTTTGCAAAAGGTGT TGGCCCCAAAAGGTATCATTACAGTGAACTAGCTGCTGCGACGGGTAACTTTGCAGAGGA GAAGAAGCTAGGAAGAGGGGGTTTTGGTCATGTTTACCAGGGCTTCCTGAAAACTGATGA TCAGGAACGGCTTGTGGCCATAAAAAAGTTCTCACCAGACTCATCTGCTCAGGGGAGGAA GGAGTTTGAGGCTGAGATCAAAATCATAAGTCGGCTGAGGCATCGGAACCTTGTCCAATT AATAGGATGGTGTGACAGTTGCATGGGACTCCTGATTGTTTATGAGCTCGTATCAGAAGG TAGTCTTGACAAGCATATATATAAAAATGCGAGGTTGCTAACATGGGCCGAAAGGTACAA GATCATCATTGGCCTTGGCTCTGCACTCCACTACCTTCACCAAGAGTGGGAGCAGTGCGT CGTCCACGGCGACATCAAGCCAAGCAACATCATGCTCGACTCCTCCTACAACACCAAGCT TGGGGACTTTGGCCTGGCGAGGCTCGTCGACCATGGCGCCAAGTCACGGACAACCAAGGT CGTGCTCGGGACCGCCGGGTACATCGACCCAGAGCTCGTCAACACGCGCAGGCCAAGCAC TGAGTCCGACGTCTACAGCTTCGGCATCGTCCTCCTCGAGATCGTCTCCGGCCGTCGCCC CGTGGAGGAACCGGACGACAGCGACGAGCTCTTCGTGCTGTCGAGATGGGTGTGGGACCT CTACAGCAAGAACGCCGTCGTGGAGGCGGTGGACGAGAGGCTCAGGTGCAGCGACGATGG CGACGACGAGCTGCAGATGGAGCGCGTGCTCGCCGTCGGGCTGTGGTGCGCGCACCCTGA CCGGAGCGAACGGCCGTCCATGGCGCAGGCTATGCACGCCCTGCAGTCGGAGGAGGCAAG GTTGCCGGCTCTTCGGCCGCAGATGTACAAGGGTGTGCCATTTCTTGCCATGGGAGAACA TAGGTACAGCGATCTTTCAATTGGCACCACTACCAGCTCCAGTGCCAGTGGAACCGGCTG CACTGCACATTCAGAGCCAACTAAACTGTAAAAGACGATGCCCTATTAGCGATGTAAAAT GCAGACTCTGACTGAAATTTATTTTCTTGGTAAAACTGAAACTGGAACAATTGACACAGG GTGCTGTGGGAAATATGGCTGACTCCTAAGCTGTTCATGGATTGGATAATTTTGTCGTTA TACTT