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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0331900-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:9921540:9926715:-1 gene:Os09g0331900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os09t0331900-01)
Sequence

ATGGAGGGTACACCAAACAAATCAGTTCAAAGCTTCGCTGGCTCGAGAACTGAGAAATCT
ACCGGGTCTAGTCATCATAGAGAAGCAGAGCAAAATGACAGTTTTACAAGAAGGGAATAT
ACTTGTGCTGATTTTATTGAAGCACTTCGCTTGATTGATCAGGAGGCATTCAAGTGTAGC
ATTGTTCTGAATGACTTCTCCATGCGAGCAAACATCACTGAACCATCTTACCGCACAGTG
AAATTAGATGGTATCTGCTCAACCTTTGTTTCATCAGTTTTAGCTGGTGGATATACCTAC
ACAGGTGAGGTTGCTACCACTGATGGAGATGCAAAGGAAAATGCAGCCCGTGTGGCGATC
AAGTCAATCCTTGTTACTAGAAGCAACCACATGTTGGAGAGCATCAGGTCAAACAAACCA
ACAGGAACAACAATACAAGGAGAGCAGTCAAGCCAGCAGACAAGTGCCCATCCTGCAGTA
ATTTTCACCCCACCTGCTAGTAATAACATCCCTTGTGCTCCCCACCATCACTATATGCTG
CATGCGCCATTTGCTCCTCTTGAACAGATGCAGTGGCGCCATCCTGGTACTCCACAGATG
GTGCCGGTTTTTCCTCATGAACAGATACAGTGGCGCCATCCTACCCCAGTACATATGCCA
TTTCATCCCCATGAACAGATGCAATGCCGCCAATCCCCTGCACCAATGCCGTTTCTTCCC
CGTGAACAGATGCAATGGCGCCATCCCGCTGCACCAATGCCAACATTTCCTCCCCATGAA
CAGATGCAATGGCATAATCCTGTTGCACAGATGGCATATCTTCCACCTGAACAGATGCAA
CGGAATGTTCCAATTGTACACACACCATCTGAAATGATGCAAATGTGGCAGCTTCCTCAA
TCAATATCCAGCTCTAATCCTGTGCTGCAAAATGGGCTTTACTCGAATACAGGTGGCGAT
GATGACATGGTAGTAGAGGTTGGTTCCGCTGAGGAGACTATGACTTTGAGTGGTACTAAG
CGCAAAATGGACCAAACTGAAGAGGCAGAGGGCAAGCAGGCAAAGATCTCCAAGTAG

Peptide Sequence

PEP ID

Os09t0331900-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:9921540:9926715:-1 gene:Os09g0331900 transcript:Os09t0331900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os09t0331900-01)
Sequence

MEGTPNKSVQSFAGSRTEKSTGSSHHREAEQNDSFTRREYTCADFIEALRLIDQEAFKCS
IVLNDFSMRANITEPSYRTVKLDGICSTFVSSVLAGGYTYTGEVATTDGDAKENAARVAI
KSILVTRSNHMLESIRSNKPTGTTIQGEQSSQQTSAHPAVIFTPPASNNIPCAPHHHYML
HAPFAPLEQMQWRHPGTPQMVPVFPHEQIQWRHPTPVHMPFHPHEQMQCRQSPAPMPFLP
REQMQWRHPAAPMPTFPPHEQMQWHNPVAQMAYLPPEQMQRNVPIVHTPSEMMQMWQLPQ
SISSSNPVLQNGLYSNTGGDDDMVVEVGSAEETMTLSGTKRKMDQTEEAEGKQAKISK

Transcript Sequence

Transcript ID

Os09t0331900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:9921540:9926715:-1 gene:Os09g0331900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os09t0331900-01)
Sequence

GTGAGAGCTAGAGCAATCAGATCATCCTCATTGTATCCTCTACTCATGGATTGAAATGGA
GGGTACACCAAACAAATCAGTTCAAAGCTTCGCTGGCTCGAGAACTGAGAAATCTACCGG
GTCTAGTCATCATAGAGAAGCAGAGCAAAATGACAGTTTTACAAGAAGGGAATATACTTG
TGCTGATTTTATTGAAGCACTTCGCTTGATTGATCAGGAGGCATTCAAGTGTAGCATTGT
TCTGAATGACTTCTCCATGCGAGCAAACATCACTGAACCATCTTACCGCACAGTGAAATT
AGATGGTATCTGCTCAACCTTTGTTTCATCAGTTTTAGCTGGTGGATATACCTACACAGG
TGAGGTTGCTACCACTGATGGAGATGCAAAGGAAAATGCAGCCCGTGTGGCGATCAAGTC
AATCCTTGTTACTAGAAGCAACCACATGTTGGAGAGCATCAGGTCAAACAAACCAACAGG
AACAACAATACAAGGAGAGCAGTCAAGCCAGCAGACAAGTGCCCATCCTGCAGTAATTTT
CACCCCACCTGCTAGTAATAACATCCCTTGTGCTCCCCACCATCACTATATGCTGCATGC
GCCATTTGCTCCTCTTGAACAGATGCAGTGGCGCCATCCTGGTACTCCACAGATGGTGCC
GGTTTTTCCTCATGAACAGATACAGTGGCGCCATCCTACCCCAGTACATATGCCATTTCA
TCCCCATGAACAGATGCAATGCCGCCAATCCCCTGCACCAATGCCGTTTCTTCCCCGTGA
ACAGATGCAATGGCGCCATCCCGCTGCACCAATGCCAACATTTCCTCCCCATGAACAGAT
GCAATGGCATAATCCTGTTGCACAGATGGCATATCTTCCACCTGAACAGATGCAACGGAA
TGTTCCAATTGTACACACACCATCTGAAATGATGCAAATGTGGCAGCTTCCTCAATCAAT
ATCCAGCTCTAATCCTGTGCTGCAAAATGGGCTTTACTCGAATACAGGTGGCGATGATGA
CATGGTAGTAGAGGTTGGTTCCGCTGAGGAGACTATGACTTTGAGTGGTACTAAGCGCAA
AATGGACCAAACTGAAGAGGCAGAGGGCAAGCAGGCAAAGATCTCCAAGTAGCATCAATT
TATCAAGTATCTACTTCTTGAGGAACCAATTGTGATGAGCATTCTCTGCACCATATCGAT
GATCCAGATATGATTCCCCGTGTTGGAGACTTGGAGTGGTACTGTTCATCTTAAATTTGG
TCTCTCTGCAAACATTAAGTTTATGGAAATGTAGAAGACTTTAAGCTGTTTCTTTAGTGA
GGCTAGCAAAACTATCATAAACCATATGCTCCTGTAAGATCAGCTGTTGACAAGTACCGT
TTATCATTTGAATATTTGTGTGCAACCTCTT