Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0318600-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:8969316:8973855:-1 gene:Os09g0318600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like containing protein. (Os09t0318600-01)
Sequence	ATGGGTCCTCGCCCACCTGGTGGTTCTTCAGATAAAAAAAGTTGTCAAAATGTCACACCA GATAAAGACAGCTCTATGAATTTCTGCCACCAACAATATCCGCAGCACCTATTTTCACAA CCACCATATGCAATGAATTTCCCATTCCCACCATTTCCTCACTACCCTCCATACACACAA AATTTGCAATATGCTGTTCCACCACAATATGCTCCATACACATTACCACCTCCTGCTGGA GCTATGCCATCAACATTTTTACCTGCTCCAGTTATTCCATCCAAGGCACCGTCTGACCAA GGCACCCCGCGTTCAATAACTGGTCCAGGAGAACAAGGCACTGACAATGCTGAACCTGAG AAGGCTACTAAGCGACTATATTGGACAGAAAAGGAGGACATAAGATTGATAAGCGCCTGG TTGATTTATTACAAGACTGACAGGTACTGGGAAAAGGTTGTAGCAGAATACAACAGTACA ATCCCTGCAACTCGAAGAAGGGAACTTCAACATGTGAAGGGCCACTGGCACAAGATATTC AGAAAGGTGGCACACTTCCATGATTGTTGGTGCCGGGTTAAGGCAAAATATCCTAGTGGC CACTCTGAGGGCATGCAACTGATGGACAAAACTTGGCTGATGTATAATGAGGAAGCACGT GTGATGTATCTTGAAGAAGCAGAGCATAATTTCGCCTTCGACCATTGCTGGAAAGCAGTT TGGAACCAACCCAAGTGGAAAGCATACATGTCTTGTTTATTTACGAAAAGAACAATGCAG TCTGATTCTTGGGAGTACATGTCGTCTTCTGAAGACTCTGAAGAAATGCCTGGAAAAGAA ATAGGTGAAGAAGTTTGCATGACATCTAAGGAAGCTAAAGTTAAGAGGTCAACTTCGTCT TCAGAGATGCAAGAAGACATGCTTATCAAGAACCCTGAGGAGCTGACAGAAGTAGAGCCT TCTATCTCCAATGAAAAGCTTCTGTTGGCCAGTTTGAAACAACAAGATGCTTGCACCAAG GACACAGGAATTTCCAAGAAGCAATCAGAATTATTGACAGCTGATACTTCCTGGCCCACT GGATTTCGTCTTGTTGACACTTCAGAATTGAATGAACATCAACAGGGGTTGGCAGTAAGG GATGATATGCTTGAAAAAGAATCACGTCCACAAGGTTTCGATGCACAAGACAACGAGAGG GCGACAAGGGAAAACATTCCTAGAAAAGAAACACAGCCACGAATTTGCAAGGCACCAAAG TTCAGTCGGAAACGTAAAGGCAAGGCATCGTCTTCCTCATGCGAGGTGCAAGAAGACATC AAACATGCGATGCATCTTCAGACCATGCTTAACAATGATCGTGTGAAGATGTCAGAGGTA CAGCTCCGCCTCTCGAAAGAGCAGCTTGAATTGGCCAGAATAAAGCAGGAAGAAGCAAGG GAGAAGAAGGAAACTACACTTTACAAGAAGTACACGGAGCTGTTGCTGGCAGACACTTCA AGGTTCGATGAGTTTCAGAAGGCAGAGTATGAGAAAGCACTGAGGCATATAGGAGGAATG CTATTCAGCAAGGATGGCAATTAG

Peptide Sequence

PEP ID	Os09t0318600-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:8969316:8973855:-1 gene:Os09g0318600 transcript:Os09t0318600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like containing protein. (Os09t0318600-01)
Sequence	MGPRPPGGSSDKKSCQNVTPDKDSSMNFCHQQYPQHLFSQPPYAMNFPFPPFPHYPPYTQ NLQYAVPPQYAPYTLPPPAGAMPSTFLPAPVIPSKAPSDQGTPRSITGPGEQGTDNAEPE KATKRLYWTEKEDIRLISAWLIYYKTDRYWEKVVAEYNSTIPATRRRELQHVKGHWHKIF RKVAHFHDCWCRVKAKYPSGHSEGMQLMDKTWLMYNEEARVMYLEEAEHNFAFDHCWKAV WNQPKWKAYMSCLFTKRTMQSDSWEYMSSSEDSEEMPGKEIGEEVCMTSKEAKVKRSTSS SEMQEDMLIKNPEELTEVEPSISNEKLLLASLKQQDACTKDTGISKKQSELLTADTSWPT GFRLVDTSELNEHQQGLAVRDDMLEKESRPQGFDAQDNERATRENIPRKETQPRICKAPK FSRKRKGKASSSSCEVQEDIKHAMHLQTMLNNDRVKMSEVQLRLSKEQLELARIKQEEAR EKKETTLYKKYTELLLADTSRFDEFQKAEYEKALRHIGGMLFSKDGN

Transcript Sequence

Transcript ID	Os09t0318600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:8969316:8973855:-1 gene:Os09g0318600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like containing protein. (Os09t0318600-01)
Sequence	GCCGCCAAAACCCTCGCCTCCTTCCCCCCACGCCGCGCTCCGACCTCTCGCCGCCGGCGA GCCCCCGCGTGATCTCCATCCTCCAACGCAGCGCCGCCGCCCGCCCGCGCTCCCGACCAC CGCGGCCCTAACGCGCTGCGCCGGGGGAGCTTCCCGTCTCCGCGGCGCTGCTTCGCGTAC GCCTCCTCCTCCTCCTCCCGCCGCCGCAATTCCGACCTCCTGATGTGCTCCGAGAAAGGC ATCGGGGAGGAGCCGGCTGTTGCCCTCGCCGTCAATCTCTGATTTCCACCCAAGGAGGAG GGATCGAAGCAGGAGGCCTGAGCCCAAGAATCCAGCTGGATTAGGTTACCATTTTCATCA ATCTGAGTGAGTGTTACACCGGCCTTGACACAATTAATTGCAATACTACTGTTTCTGCTG ACCTGCTTTGGTCTAGTGGGAGATCAAGTGTTAATGTTTCCGATTTGTGGTATCTCCAGG ACAGTGACTGAAAGTACACAAAGAGCTGAACAAAAGAGCTATTGGGTATATTTCCCTTAA CAGTTTGTTGGGAACATTTGCCAAATAGGTGGTTCAGAATTGCCTCCAAACCCATGTGTT TCACACACATCTGATCACACCCAATATACACATTCCGTACAATCTTCTCTCGTTTGCAAT GGGTCCTCGCCCACCTGGTGGTTCTTCAGATAAAAAAAGTTGTCAAAATGTCACACCAGA TAAAGACAGCTCTATGAATTTCTGCCACCAACAATATCCGCAGCACCTATTTTCACAACC ACCATATGCAATGAATTTCCCATTCCCACCATTTCCTCACTACCCTCCATACACACAAAA TTTGCAATATGCTGTTCCACCACAATATGCTCCATACACATTACCACCTCCTGCTGGAGC TATGCCATCAACATTTTTACCTGCTCCAGTTATTCCATCCAAGGCACCGTCTGACCAAGG CACCCCGCGTTCAATAACTGGTCCAGGAGAACAAGGCACTGACAATGCTGAACCTGAGAA GGCTACTAAGCGACTATATTGGACAGAAAAGGAGGACATAAGATTGATAAGCGCCTGGTT GATTTATTACAAGACTGACAGGTACTGGGAAAAGGTTGTAGCAGAATACAACAGTACAAT CCCTGCAACTCGAAGAAGGGAACTTCAACATGTGAAGGGCCACTGGCACAAGATATTCAG AAAGGTGGCACACTTCCATGATTGTTGGTGCCGGGTTAAGGCAAAATATCCTAGTGGCCA CTCTGAGGGCATGCAACTGATGGACAAAACTTGGCTGATGTATAATGAGGAAGCACGTGT GATGTATCTTGAAGAAGCAGAGCATAATTTCGCCTTCGACCATTGCTGGAAAGCAGTTTG GAACCAACCCAAGTGGAAAGCATACATGTCTTGTTTATTTACGAAAAGAACAATGCAGTC TGATTCTTGGGAGTACATGTCGTCTTCTGAAGACTCTGAAGAAATGCCTGGAAAAGAAAT AGGTGAAGAAGTTTGCATGACATCTAAGGAAGCTAAAGTTAAGAGGTCAACTTCGTCTTC AGAGATGCAAGAAGACATGCTTATCAAGAACCCTGAGGAGCTGACAGAAGTAGAGCCTTC TATCTCCAATGAAAAGCTTCTGTTGGCCAGTTTGAAACAACAAGATGCTTGCACCAAGGA CACAGGAATTTCCAAGAAGCAATCAGAATTATTGACAGCTGATACTTCCTGGCCCACTGG ATTTCGTCTTGTTGACACTTCAGAATTGAATGAACATCAACAGGGGTTGGCAGTAAGGGA TGATATGCTTGAAAAAGAATCACGTCCACAAGGTTTCGATGCACAAGACAACGAGAGGGC GACAAGGGAAAACATTCCTAGAAAAGAAACACAGCCACGAATTTGCAAGGCACCAAAGTT CAGTCGGAAACGTAAAGGCAAGGCATCGTCTTCCTCATGCGAGGTGCAAGAAGACATCAA ACATGCGATGCATCTTCAGACCATGCTTAACAATGATCGTGTGAAGATGTCAGAGGTACA GCTCCGCCTCTCGAAAGAGCAGCTTGAATTGGCCAGAATAAAGCAGGAAGAAGCAAGGGA GAAGAAGGAAACTACACTTTACAAGAAGTACACGGAGCTGTTGCTGGCAGACACTTCAAG GTTCGATGAGTTTCAGAAGGCAGAGTATGAGAAAGCACTGAGGCATATAGGAGGAATGCT ATTCAGCAAGGATGGCAATTAGTGCCCTTGCTTCAATTTGTCTTAAAGCGTTACTGTGCA AATGTCATCTCAAGCACTAGCTAGTCATAGATCCTTCTATTCTACCTGTTGAATGAAGGG ACTAGTCATAGATCACTTGCAAGTTTAGCCTAGACTTACTGACATCCAGTTTGTGGAACT TGACTAATTGAATCCTGTAAGTGATGGATCAATATGTAGTCAGCTTTAGTTGGCTCGTCT AAGTTCTTAGGAATGTTCATTCAGCTGGCAGAAATGTCCATTTTGCTAACCTGATCTACA CTAGCAAGAATGCTTGAACAGTGATGTCTATGCAACATCGACGGCAAGAATGCTTGAACA GCTATAGTGTAGATAAGGCAACCTCTTTGTTGGTTGTCGTGAGAACATTCTGGGGTGTCA GCTGTGATCTCACATTGCATCCCATGCCAAAAACAAAATGTTCCTATTCGGACAAGAGAA AACTAATTATGTTGCATCC