Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0317700-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:8879454:8883845:-1 gene:Os09g0317700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like containing protein. (Os09t0317700-01)
Sequence	ATGGGGCCTCACCCACCTAGTAGTTATTCAGATAAAAAAACTTGCCAAAATGTCCCACCA GAAAAACCCAGCTCCACGAGTTTCTGCCATCCACAATTTCCGCAGCACTTACTTTCACAT CCAGCATATGCAATGAATTTCCCTTTCCCGCCGTTTCCTCACTATCCTCCATACTCGCAA AATTTCCAATATGCTGTTCCACCACAATATGCTCCATACTCATTACCGCCACCTGATGGA GCTATGCCATCACCATATGTACCAGCTACAGTTATGCCATCCAAGGCACCCTCTGATCAA GGCACCCCACATTCAGTAACTGGTCCAGGACAACAAGATGATGACGATGCTGAACCTGAG AGGACTGCTAGGCGACTAGCATGGACAGAAGAGGAAGACATTAGATTGATAAGCACTTGG TTGATTAACTACAAGACTGACAAGTACTGGGATAAGGTTGCAGCAGAATACAACAGTGCA ACCCCCGGAGCTCGGAGAAGGGAAGTGAAGCATTTGAAGAACCGCTGGCAGAGGATGATC AATAAGGTGGCACATTTCAATGATTGTTGGTGCCGGGTCATGGCAAAATATCCTAGTGGC CAGTCAGAGGGCATGCAACAGATGGACAAAACTTGGCTGATGTATAATAAGGAAGCACAT GTGATGTATCTCGAAGAAGCGAAGCATAAGTTCACCTTTGGCCATTGCTGGAACGCTGTT TGGGACCAACCCAAGTGGAAAGAATACATCTCTTCTTTCTCCGCAAAAAGAGTGATGCGA TCTGAGTCCGGTGGTTACGTGTCATCTTCGGAAGACTCTGAAGATATGCAAGAAGGAAAA TGCTTAGTGGATCCTCTGGACATGCTTCCCAAGAACCATGAAGATATGACAGAAGTCCAG CCGTCTGTCTCAAATCAAAAGAAGCAATTAGAACTATTGACAGCTGATGCGTCGTGGCCT ATTGAATTTCAGCTTGGGAGGCACCAATTGATGACTGGAACATCAAAATTGAACGAACAT CAGCAGGGGGTGGCAGTGAGGGATGAAATGCTTGAAAAAGAATCGGGCCCACAAGATTTT GAGGTGCTAGACAATGAGAGAGTGGCAAGGGAAGATGAACCTAAAAAAGAAACACAGCCT CATCAAGGTTTCAAGGCGCGAAAGGTCAATCGGAAACGTAAAGGCAAGGCATCATCTTCT TCATGTGAGGTGCAGGAAGACATCAAACATGCATTATATCTTCAGACCATGCTTAACAAT GATCGTGAGAAAATGTCAGAGGTACAGCTCCGCCTCTCGAAAGAGCAGCTTGAATTGGCC AGAATAAAGCAGGATGAAGCGAATGTAAAGAAAGAAACAGCACTTTACATGAAATACACA GAGCTGTTGCTGGCAGACACTTCAAGGTTTGATGAGTTTCAGAAGGCAGAGTATGAGAAA GCATTGAAGCATATAGGAGGGATACTATTTAGCAAGGATGTCAATTAG

Peptide Sequence

PEP ID	Os09t0317700-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:8879454:8883845:-1 gene:Os09g0317700 transcript:Os09t0317700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like containing protein. (Os09t0317700-01)
Sequence	MGPHPPSSYSDKKTCQNVPPEKPSSTSFCHPQFPQHLLSHPAYAMNFPFPPFPHYPPYSQ NFQYAVPPQYAPYSLPPPDGAMPSPYVPATVMPSKAPSDQGTPHSVTGPGQQDDDDAEPE RTARRLAWTEEEDIRLISTWLINYKTDKYWDKVAAEYNSATPGARRREVKHLKNRWQRMI NKVAHFNDCWCRVMAKYPSGQSEGMQQMDKTWLMYNKEAHVMYLEEAKHKFTFGHCWNAV WDQPKWKEYISSFSAKRVMRSESGGYVSSSEDSEDMQEGKCLVDPLDMLPKNHEDMTEVQ PSVSNQKKQLELLTADASWPIEFQLGRHQLMTGTSKLNEHQQGVAVRDEMLEKESGPQDF EVLDNERVAREDEPKKETQPHQGFKARKVNRKRKGKASSSSCEVQEDIKHALYLQTMLNN DREKMSEVQLRLSKEQLELARIKQDEANVKKETALYMKYTELLLADTSRFDEFQKAEYEK ALKHIGGILFSKDVN

Transcript Sequence

Transcript ID	Os09t0317700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:8879454:8883845:-1 gene:Os09g0317700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like containing protein. (Os09t0317700-01)
Sequence	ATTCCGCCTGAACCCCACACCCGGATTCCGCCGTCAGCCAAAACCCTCGCCGCCGCCGCC GGCTGCATGCGTGGTACCTCGGCACCGGAGAACTCCCCTGTCCTCCTGGCCGTCCGCGCG TAGCCTCCGCTCTCCGACGCAGCGCCCGCCCGCCCGCCCGCCCGCCCGAGCACCGGCGGC CCTTCGTTTCTCCGGCACCTCCGCCGCCGCGCGACGTCGGAGGGATCGCAACAGGAGGCC AGAACACAAGAATTCTGCTGGATTAGGGTTGTTGCTCTCCTCCAAGTGGCATCCAACGGA ACAGTAAATGAAATTAGAGCTGAACAAGATATCTCTTGGGTGTATTCTTATTTATCTGTT GGGAACTTCAACCAAATAGGTTCTCAGAATTGGCTTCAAAGTTCAAACCCATGTGCTTTC TGCTCGTTTGACATACCCACTATATACATTTCACACCATTCCACTCATTTGCAATGGGGC CTCACCCACCTAGTAGTTATTCAGATAAAAAAACTTGCCAAAATGTCCCACCAGAAAAAC CCAGCTCCACGAGTTTCTGCCATCCACAATTTCCGCAGCACTTACTTTCACATCCAGCAT ATGCAATGAATTTCCCTTTCCCGCCGTTTCCTCACTATCCTCCATACTCGCAAAATTTCC AATATGCTGTTCCACCACAATATGCTCCATACTCATTACCGCCACCTGATGGAGCTATGC CATCACCATATGTACCAGCTACAGTTATGCCATCCAAGGCACCCTCTGATCAAGGCACCC CACATTCAGTAACTGGTCCAGGACAACAAGATGATGACGATGCTGAACCTGAGAGGACTG CTAGGCGACTAGCATGGACAGAAGAGGAAGACATTAGATTGATAAGCACTTGGTTGATTA ACTACAAGACTGACAAGTACTGGGATAAGGTTGCAGCAGAATACAACAGTGCAACCCCCG GAGCTCGGAGAAGGGAAGTGAAGCATTTGAAGAACCGCTGGCAGAGGATGATCAATAAGG TGGCACATTTCAATGATTGTTGGTGCCGGGTCATGGCAAAATATCCTAGTGGCCAGTCAG AGGGCATGCAACAGATGGACAAAACTTGGCTGATGTATAATAAGGAAGCACATGTGATGT ATCTCGAAGAAGCGAAGCATAAGTTCACCTTTGGCCATTGCTGGAACGCTGTTTGGGACC AACCCAAGTGGAAAGAATACATCTCTTCTTTCTCCGCAAAAAGAGTGATGCGATCTGAGT CCGGTGGTTACGTGTCATCTTCGGAAGACTCTGAAGATATGCAAGAAGGAAAATGCTTAG TGGATCCTCTGGACATGCTTCCCAAGAACCATGAAGATATGACAGAAGTCCAGCCGTCTG TCTCAAATCAAAAGAAGCAATTAGAACTATTGACAGCTGATGCGTCGTGGCCTATTGAAT TTCAGCTTGGGAGGCACCAATTGATGACTGGAACATCAAAATTGAACGAACATCAGCAGG GGGTGGCAGTGAGGGATGAAATGCTTGAAAAAGAATCGGGCCCACAAGATTTTGAGGTGC TAGACAATGAGAGAGTGGCAAGGGAAGATGAACCTAAAAAAGAAACACAGCCTCATCAAG GTTTCAAGGCGCGAAAGGTCAATCGGAAACGTAAAGGCAAGGCATCATCTTCTTCATGTG AGGTGCAGGAAGACATCAAACATGCATTATATCTTCAGACCATGCTTAACAATGATCGTG AGAAAATGTCAGAGGTACAGCTCCGCCTCTCGAAAGAGCAGCTTGAATTGGCCAGAATAA AGCAGGATGAAGCGAATGTAAAGAAAGAAACAGCACTTTACATGAAATACACAGAGCTGT TGCTGGCAGACACTTCAAGGTTTGATGAGTTTCAGAAGGCAGAGTATGAGAAAGCATTGA AGCATATAGGAGGGATACTATTTAGCAAGGATGTCAATTAGTGCCCTCGCAACAATTTAT CTTAAGCATGCATTTCTGTGCAAATATCATCCCAACAACTAGTAATAGATCGTTTTGTTC TACTTAACTGAAGGATTGCCTCCACTAACACCTGTGTCTGTGTTAGGTTTAATCATCTCT AGCAAGATTTAACAGAGATTAGTACTGATTGAATCGTGGAAGTGATGGATCAATATGTAT TTAGCTATTAGTGGCTTATCTAATTTGCAACTGACCTGTGCAAAGAATGAACTAGTGGCT TGTCTTGGAGTGATGGTTGAAGGCAAATTGCAAATACTTGAAAGTTAACCC