Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0315700-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:8692296:8697399:-1 gene:Os09g0315700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphoenolpyruvate carboxylase 2b, PEPCase 2b description:Phosphoenolpyruvate carboxylase family protein. (Os09t0315700-01)
Sequence	ATGTCGGCGATGTCGGCGGCGGGCGGCGGCGGCGGCGTGGGGAAGGTGGAGCGGCTGTCG TCGATCGACGCGCAGCTGCGGCAGCTGGTGCCGGCGAAGCTGTCGGAGGACGACAAGCTC ATCGAGTACGACGCGCTCCTCCTCGACCGATTCCTCGACGTCCTCCATGGCCTCCACGGC GACGACCTCAAGGATCTCGTTCAAGAATGCTATGAGGTGGCCGCGGAGTATGAAACAAAG CACGACGTGCAAAAGCTCGATGAACTCGGCAACATGATAACAAGCTTGGATCCGGGCGAC TCGATTGTTATTGCGAAAGCCTTTTCGCACATGCTTAACTTGGCCAACTTGGCTGAAGAA GTCCAGATCGCATACAGGAGGAGGATCAAGCTCAAGAAGGGTGATTTCGCTGACGAAAAC TCGGCAATGACTGAATCCGACATTGAGGAAACACTCAAGAGGCTTGTTTTTGACCTGAAG AAATCCCCTGCTGAGGTCTTTGATGCCCTCAAGAGTCAGACTGTTGACCTTGTTTTGACT GCACATCCAACACAGTCTGTGAGGAGGTCACTGCTCCAGAAACACTCCAGGATTCGGAAC TGTCTGGTTCAGCTTTATTCAAAGGATATCACTCCAGATGACAAGCAAGAGCTTGATGAG GCTCTCCAGAGAGAGATCCAAGCTGCCTTTAGAACCGATGAGATCCGAAGAACACAGCCC ACTCCCCAAGATGAAATGCGTGCTGGCATGAGCTACTTCCATGAAACAATATGGAAGGGT GTTCCAAAGTTCTTGCGCCGTGTGGATACTGCATTGAAGAACATCGGTATCGACGAGCGT GTTCCTTACAATGCTCCTCTTATTCAGTTCTCGTCTTGGATGGGAGGAGATCGTGATGGA AATCCAAGAGTCACACCAGAGGTTACAAGGGATGTCTGCTTGCTTGCAAGAATGATGGCA GCAAACTTGTATTGCTCACAAATTGAGGATCTCATGTTTGAGTTATCTATGTGGCGATGT AACGAGGAGCTACGCTCACGAGCTGATGATCTGCACCGCTCTTCTAAGAAGGACGCAAAG CATTACATAGAGTTTTGGAAGAAGGTTCCTCTGAATGAACCATACCGGGTGATACTGAGT GATGTGAGAGATAAGCTTTACAATACACGTGAACGATCACGGGAGTTGTTGTCCAGCGGA TATTGCGACATCCCTGAGGAAGCAACTCTGACAAATGTTGAGCAGCTATTGGAGCCCTTG GAGCTATGCTACAGGTCGCTGTGCGCCTGTGGTGACCGTGCCATCGCTGATGGAAGCCTT CTTGATTTCTTGCGCCAAGTTTCCACCTTTGGACTCTCCCTTGTGAGGCTTGACATTAGG CAAGAATCCGACAGACACACCGATGTCCTTGATGCCATCACGACATACCTGGGCATAGGA TCTTACCGTGAGTGGTCCGAGGAACGCCGTCAAGAGTGGCTGTTGTCCGAACTCAACGGG AAGCGACCATTGTTTGGCCCAGACCTTCCCAGGACAGATGAGGTTGCTGATGTTCTAGAC ACATTCCATGTGATTGCCGAGCTCCCTGCTGACAGTTTTGGAGCCTATGTTATTTCCATG GCAACAGCCCCCTCGGATGTCCTTGCTGTTGAGCTCCTCCAACGCGAGTGCCATGTCAAG ACACCGCTTAGAGTTGTCCCCCTGTTCGAGAAGTTGGCTGATCTTGAGTCTGCCCCTGCG GCATTGACCAGGCTCTTCTCAATAAGTTGGTACAGGCAGAGGATCAATGGTAAGCAGGAG GTCATGATTGGGTATTCAGATTCAGGCAAGGATGCTGGCCGTCTCTCGGCAGCTTGGCAG ATGTACAAGGCTCAGGAGCAGCTCGTCAAGGTAGCGAAGGATTTCGGGGTCAAGTTGACG ATGTTCCATGGACGAGGTGGAACCGTTGGTAGGGGCGGTGGGCCGACTCACCTTGCCATC TTGTCTCAGCCTCCAGACACGATCAACGGATCGCTCCGTGTCACTGTTCAGGGTGAAGTC ATTGAGCAGAGCTTTGGTGAGGAGCACTTGTGTTTCAGGACACTGCAGCGTTTCACCGCT GCTACACTTGAGCACGGCATGCATCCACCCAGTGCACCGAAGCCAGAATGGCGAGCTCTT CTTGATGAGATGGCTGTGGTGGCAACCAAGGAGTATCGATCCGTAGTGTTCCAAGAGCCA CGCTTTGTGGAGTATTTCCGCCTTGCAACACCTGAGACAGAGTATGGAAGGATGAACATA GGAAGCAGGCCATCCAAGAGGAAGCCGAGTGGAGGCATTGAATCACTCCGTGCGATCCCA TGGATCTTCGCATGGACGCAGACCCGCTTCCACCTTCCCGTCTGGCTTGGATTCGGTGCT GCATTCAAGCACGCCCTTCAGAAGGACATCAGGAATCTCCACATGCTCCAGGAGATGTAC AACGAGTGGCCGTTCTTCAGGGTCACTCTCGACCTGATTGAGATGGTTTTCGCCAAGGGT AATCCTGGCATTGCTGCCCTTTACGACAAACTCCTCGTTTCTGAGGATCTACAGCCACTG GGTGAGAAGCTGAGAGCCAACTATGTAGAGACACAAAAGCTGCTTCTTCAGGTTGCTGGC CATAGGGATCTTCTTGAAGGTGACCCCTACCTGAAGCAGCGGCTCCGACTCCGCGACGCC TACATAACCACCCTGAATGTCTGCCAAGCCTACACGCTGAAACGGATCCGCGACCCGGAT TACCACGTCACGCTGCGCCCTCACCTGTCCAAGGAGGTGATGGATGGGAGCAAGCCGGCC GCGGAGCTTGTGAAGCTGAACCCGGGTAGCGAGTACGCGCCAGGGCTGGAGGACACCCTC ATCCTGACCATGAAGGGCATTGCTGCAGGGTTGCAGAACACTGGTTAA

Peptide Sequence

PEP ID	Os09t0315700-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:8692296:8697399:-1 gene:Os09g0315700 transcript:Os09t0315700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphoenolpyruvate carboxylase 2b, PEPCase 2b description:Phosphoenolpyruvate carboxylase family protein. (Os09t0315700-01)
Sequence	MSAMSAAGGGGGVGKVERLSSIDAQLRQLVPAKLSEDDKLIEYDALLLDRFLDVLHGLHG DDLKDLVQECYEVAAEYETKHDVQKLDELGNMITSLDPGDSIVIAKAFSHMLNLANLAEE VQIAYRRRIKLKKGDFADENSAMTESDIEETLKRLVFDLKKSPAEVFDALKSQTVDLVLT AHPTQSVRRSLLQKHSRIRNCLVQLYSKDITPDDKQELDEALQREIQAAFRTDEIRRTQP TPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGIDERVPYNAPLIQFSSWMGGDRDG NPRVTPEVTRDVCLLARMMAANLYCSQIEDLMFELSMWRCNEELRSRADDLHRSSKKDAK HYIEFWKKVPLNEPYRVILSDVRDKLYNTRERSRELLSSGYCDIPEEATLTNVEQLLEPL ELCYRSLCACGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVLDAITTYLGIG SYREWSEERRQEWLLSELNGKRPLFGPDLPRTDEVADVLDTFHVIAELPADSFGAYVISM ATAPSDVLAVELLQRECHVKTPLRVVPLFEKLADLESAPAALTRLFSISWYRQRINGKQE VMIGYSDSGKDAGRLSAAWQMYKAQEQLVKVAKDFGVKLTMFHGRGGTVGRGGGPTHLAI LSQPPDTINGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPSAPKPEWRAL LDEMAVVATKEYRSVVFQEPRFVEYFRLATPETEYGRMNIGSRPSKRKPSGGIESLRAIP WIFAWTQTRFHLPVWLGFGAAFKHALQKDIRNLHMLQEMYNEWPFFRVTLDLIEMVFAKG NPGIAALYDKLLVSEDLQPLGEKLRANYVETQKLLLQVAGHRDLLEGDPYLKQRLRLRDA YITTLNVCQAYTLKRIRDPDYHVTLRPHLSKEVMDGSKPAAELVKLNPGSEYAPGLEDTL ILTMKGIAAGLQNTG

Transcript Sequence

Transcript ID	Os09t0315700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:8692296:8697399:-1 gene:Os09g0315700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphoenolpyruvate carboxylase 2b, PEPCase 2b description:Phosphoenolpyruvate carboxylase family protein. (Os09t0315700-01)
Sequence	ACCAAGTTCGCAGCAGCAATCGTCTTCCTCTTCTTCTTGTTGTTGTTGGCGATGTCGGCG ATGTCGGCGGCGGGCGGCGGCGGCGGCGTGGGGAAGGTGGAGCGGCTGTCGTCGATCGAC GCGCAGCTGCGGCAGCTGGTGCCGGCGAAGCTGTCGGAGGACGACAAGCTCATCGAGTAC GACGCGCTCCTCCTCGACCGATTCCTCGACGTCCTCCATGGCCTCCACGGCGACGACCTC AAGGATCTCGTTCAAGAATGCTATGAGGTGGCCGCGGAGTATGAAACAAAGCACGACGTG CAAAAGCTCGATGAACTCGGCAACATGATAACAAGCTTGGATCCGGGCGACTCGATTGTT ATTGCGAAAGCCTTTTCGCACATGCTTAACTTGGCCAACTTGGCTGAAGAAGTCCAGATC GCATACAGGAGGAGGATCAAGCTCAAGAAGGGTGATTTCGCTGACGAAAACTCGGCAATG ACTGAATCCGACATTGAGGAAACACTCAAGAGGCTTGTTTTTGACCTGAAGAAATCCCCT GCTGAGGTCTTTGATGCCCTCAAGAGTCAGACTGTTGACCTTGTTTTGACTGCACATCCA ACACAGTCTGTGAGGAGGTCACTGCTCCAGAAACACTCCAGGATTCGGAACTGTCTGGTT CAGCTTTATTCAAAGGATATCACTCCAGATGACAAGCAAGAGCTTGATGAGGCTCTCCAG AGAGAGATCCAAGCTGCCTTTAGAACCGATGAGATCCGAAGAACACAGCCCACTCCCCAA GATGAAATGCGTGCTGGCATGAGCTACTTCCATGAAACAATATGGAAGGGTGTTCCAAAG TTCTTGCGCCGTGTGGATACTGCATTGAAGAACATCGGTATCGACGAGCGTGTTCCTTAC AATGCTCCTCTTATTCAGTTCTCGTCTTGGATGGGAGGAGATCGTGATGGAAATCCAAGA GTCACACCAGAGGTTACAAGGGATGTCTGCTTGCTTGCAAGAATGATGGCAGCAAACTTG TATTGCTCACAAATTGAGGATCTCATGTTTGAGTTATCTATGTGGCGATGTAACGAGGAG CTACGCTCACGAGCTGATGATCTGCACCGCTCTTCTAAGAAGGACGCAAAGCATTACATA GAGTTTTGGAAGAAGGTTCCTCTGAATGAACCATACCGGGTGATACTGAGTGATGTGAGA GATAAGCTTTACAATACACGTGAACGATCACGGGAGTTGTTGTCCAGCGGATATTGCGAC ATCCCTGAGGAAGCAACTCTGACAAATGTTGAGCAGCTATTGGAGCCCTTGGAGCTATGC TACAGGTCGCTGTGCGCCTGTGGTGACCGTGCCATCGCTGATGGAAGCCTTCTTGATTTC TTGCGCCAAGTTTCCACCTTTGGACTCTCCCTTGTGAGGCTTGACATTAGGCAAGAATCC GACAGACACACCGATGTCCTTGATGCCATCACGACATACCTGGGCATAGGATCTTACCGT GAGTGGTCCGAGGAACGCCGTCAAGAGTGGCTGTTGTCCGAACTCAACGGGAAGCGACCA TTGTTTGGCCCAGACCTTCCCAGGACAGATGAGGTTGCTGATGTTCTAGACACATTCCAT GTGATTGCCGAGCTCCCTGCTGACAGTTTTGGAGCCTATGTTATTTCCATGGCAACAGCC CCCTCGGATGTCCTTGCTGTTGAGCTCCTCCAACGCGAGTGCCATGTCAAGACACCGCTT AGAGTTGTCCCCCTGTTCGAGAAGTTGGCTGATCTTGAGTCTGCCCCTGCGGCATTGACC AGGCTCTTCTCAATAAGTTGGTACAGGCAGAGGATCAATGGTAAGCAGGAGGTCATGATT GGGTATTCAGATTCAGGCAAGGATGCTGGCCGTCTCTCGGCAGCTTGGCAGATGTACAAG GCTCAGGAGCAGCTCGTCAAGGTAGCGAAGGATTTCGGGGTCAAGTTGACGATGTTCCAT GGACGAGGTGGAACCGTTGGTAGGGGCGGTGGGCCGACTCACCTTGCCATCTTGTCTCAG CCTCCAGACACGATCAACGGATCGCTCCGTGTCACTGTTCAGGGTGAAGTCATTGAGCAG AGCTTTGGTGAGGAGCACTTGTGTTTCAGGACACTGCAGCGTTTCACCGCTGCTACACTT GAGCACGGCATGCATCCACCCAGTGCACCGAAGCCAGAATGGCGAGCTCTTCTTGATGAG ATGGCTGTGGTGGCAACCAAGGAGTATCGATCCGTAGTGTTCCAAGAGCCACGCTTTGTG GAGTATTTCCGCCTTGCAACACCTGAGACAGAGTATGGAAGGATGAACATAGGAAGCAGG CCATCCAAGAGGAAGCCGAGTGGAGGCATTGAATCACTCCGTGCGATCCCATGGATCTTC GCATGGACGCAGACCCGCTTCCACCTTCCCGTCTGGCTTGGATTCGGTGCTGCATTCAAG CACGCCCTTCAGAAGGACATCAGGAATCTCCACATGCTCCAGGAGATGTACAACGAGTGG CCGTTCTTCAGGGTCACTCTCGACCTGATTGAGATGGTTTTCGCCAAGGGTAATCCTGGC ATTGCTGCCCTTTACGACAAACTCCTCGTTTCTGAGGATCTACAGCCACTGGGTGAGAAG CTGAGAGCCAACTATGTAGAGACACAAAAGCTGCTTCTTCAGGTTGCTGGCCATAGGGAT CTTCTTGAAGGTGACCCCTACCTGAAGCAGCGGCTCCGACTCCGCGACGCCTACATAACC ACCCTGAATGTCTGCCAAGCCTACACGCTGAAACGGATCCGCGACCCGGATTACCACGTC ACGCTGCGCCCTCACCTGTCCAAGGAGGTGATGGATGGGAGCAAGCCGGCCGCGGAGCTT GTGAAGCTGAACCCGGGTAGCGAGTACGCGCCAGGGCTGGAGGACACCCTCATCCTGACC ATGAAGGGCATTGCTGCAGGGTTGCAGAACACTGGTTAAGACTTAGGAGAGATTGCCTGA GTGCCATCTTTTTTGTATCTTTCCTTTGATCATTTGCCTTGGGCCCTGTTATTTTGGATA CTGCTGAATATTGGTCTCCTTACTGAGGGAGGGGTAACAAATACCGGCGTTTTTTTGCCT ATGTATATTATTACTGAAATAAAAGGAGACCATGATCATTATAATAACCT