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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0314900-00
CDS Infomation

cds chromosome:IRGSP-1.0:9:8636381:8639457:1 gene:Os09g0314900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Proteasome maturation factor UMP1 family protein. (Os09t0314900-00)
Sequence

ATGGCGAGCGGCAGCATCGTGAAGAAGGAGGTCGGCGAGAACCACGACGTGCTCCGCTTC
GGCTTCAACAACAGCGTCAAGGGCGACCTCGCGCCGCAGCACCCGATCCAGGCCACCGTC
CACAAGGAGGCCAAGTTCTGGGCGGATAAGAAGAGGTTCGGGGCGGAAGCCATCTACGGA
TCCGCTTTCAACATCCGCAAGGATCTCGATGCCCAAATCCTCTCCAAGTTCCAAAGGCCC
CCTGGTGCATTGCCATCATCTATGCTAGGATACGAGGCGCTGACTGGTTCCTTGGATGAT
TTCGGGTTTGAAGATTATCTCAACTTGCCCCAAGATTCTGACAGCTTCCATGCTCCAGAC
ATGCACCACGGAATGGAGGTTCTCCTTGGTTTGTCAAAGGGACCGATTTGCCCTAGTTTC
AATTGA

Peptide Sequence

PEP ID

Os09t0314900-00
PEP Infomation

pep chromosome:IRGSP-1.0:9:8636381:8639457:1 gene:Os09g0314900 transcript:Os09t0314900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Proteasome maturation factor UMP1 family protein. (Os09t0314900-00)
Sequence

MASGSIVKKEVGENHDVLRFGFNNSVKGDLAPQHPIQATVHKEAKFWADKKRFGAEAIYG
SAFNIRKDLDAQILSKFQRPPGALPSSMLGYEALTGSLDDFGFEDYLNLPQDSDSFHAPD
MHHGMEVLLGLSKGPICPSFN

Transcript Sequence

Transcript ID

Os09t0314900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:8636381:8639457:1 gene:Os09g0314900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Proteasome maturation factor UMP1 family protein. (Os09t0314900-00)
Sequence

CTTCTCCCCAAAGAAGCACAAGAAGAGGAAGAGCTTGGCGACGATGGCGAGCGGCAGCAT
CGTGAAGAAGGAGGTCGGCGAGAACCACGACGTGCTCCGCTTCGGCTTCAACAACAGCGT
CAAGGGCGACCTCGCGCCGCAGCACCCGATCCAGGCCACCGTCCACAAGGAGGCCAAGTT
CTGGGCGGATAAGAAGAGGTTCGGGGCGGAAGCCATCTACGGATCCGCTTTCAACATCCG
CAAGGATCTCGATGCCCAAATCCTCTCCAAGTTCCAAAGGCCCCCTGGTGCATTGCCATC
ATCTATGCTAGGATACGAGGCGCTGACTGGTTCCTTGGATGATTTCGGGTTTGAAGATTA
TCTCAACTTGCCCCAAGATTCTGACAGCTTCCATGCTCCAGACATGCACCACGGAATGGA
GGTTCTCCTTGGTTTGTCAAAGGGACCGATTTGCCCTAGTTTCAATTGATTTCACAAAAT
GTATTTCTCGTCTTGCACTGTTCTCCTCATTCAATATCTATGTCGCTCTTTAGACTGAGA
TTTCGATG