Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0314500-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:8613403:8618697:1 gene:Os09g0314500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os09t0314500-01)
Sequence

ATGGAGGTGATGGGAGCGGAGGAGGCGAGGACTTCGAGGGTGGTGGTGGCGGCGGCGGGG
CGCAGCCTCAACCCGAACGCGAAGGAGTTCGTGCCGCGGTGGCACCGCCACGCCGCCGCC
GCCGACGACGACGACGCCGCCAGGAGGACGAAGCTCTCCGCGGACGCGCCGGAGTTCGTC
TACGAGGGGTTCTGGCGAGGCGTTGATGGTCTCACCGGCTACGGCTACGGCTACGGCGAC
GGCCACGACGGCGCGCCGGAGGAGCTCGTCGTCGTCGTCTCGGAGCGCCTCAACCCGGAC
GCGCCGGAGTTCACCGCCGCCGCCTCGATCCGCCGGAGAAGATCGCCGGGGAGCGGGAAT
GGCATCTCCTCCACCCGCCACTGGAGTAGGAGGGGTAGTAGAAACTTCTCCAGACAAGGA
AGATCAGCCCCGTTTTCTTCTAGGGTGCGAAGGGCCCAGAAGGAAGAGTTTGTGAGAAGA
ACAATATTTGTCAGTGATATAGACCATACTGTTACTGAGGACATGTTAGCTGAACTGTTC
GGGAGCTATTGCAGCGTGGTGGTGGATTGCCGCATCTGTGGAGATCACTCATCTGGCCTT
AGGTTTGCATTTATTGAATTTCAAGATGAGAGTGATGCTTATGCTGCATTGGATCTTGAT
GGGTATGTTCTTGGCATTTGCCCTCTTAGGGTTTCACCTTCCAAGACTGCAATCATGCCT
GTGAACCCTTCTTTTCTTCCTCAGTCTGAAGCTGAGAGGGAGATGTGCTCAAGAACAATC
TATTGCACAAACATCGACAAGAGTGTCAATGTAACAGATTTGAAATACTTCTGCGAGGAA
CACTTTGGTCAGGTTTTCCGCCTAAAACTGTTAGGTGATGATGGTCACCCCACCCGCATA
GCTTTTATTGAGTTTGCTGAGGTTGATGGTGCTATTAACGCCCTGAACTCCAGTGGCATA
TTTGCAAGTGGCCAGCCTATCAGGGTGTGCCCTTCAAAGACGCCGATCAGGAGCGTCGCG
TCCTACTACTCCACATCAGCTAATACCATGACATCGAACTGA

Peptide Sequence

PEP ID

Os09t0314500-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:8613403:8618697:1 gene:Os09g0314500 transcript:Os09t0314500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os09t0314500-01)
Sequence

MEVMGAEEARTSRVVVAAAGRSLNPNAKEFVPRWHRHAAAADDDDAARRTKLSADAPEFV
YEGFWRGVDGLTGYGYGYGDGHDGAPEELVVVVSERLNPDAPEFTAAASIRRRRSPGSGN
GISSTRHWSRRGSRNFSRQGRSAPFSSRVRRAQKEEFVRRTIFVSDIDHTVTEDMLAELF
GSYCSVVVDCRICGDHSSGLRFAFIEFQDESDAYAALDLDGYVLGICPLRVSPSKTAIMP
VNPSFLPQSEAEREMCSRTIYCTNIDKSVNVTDLKYFCEEHFGQVFRLKLLGDDGHPTRI
AFIEFAEVDGAINALNSSGIFASGQPIRVCPSKTPIRSVASYYSTSANTMTSN

Transcript Sequence

Transcript ID

Os09t0314500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:8613403:8618697:1 gene:Os09g0314500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os09t0314500-01)
Sequence

GTGCCAAATCTACCAACTCTTCTCCCCTCCCCCTCCTCGCGATCTCGCGCTCTCGACCTC
GTCGCCGCCGCCGATCGCCGCCGCCGCAGCCGCAGCCGGACGGAGAGTCGGAGACCGTAT
GGAGGTGATGGGAGCGGAGGAGGCGAGGACTTCGAGGGTGGTGGTGGCGGCGGCGGGGCG
CAGCCTCAACCCGAACGCGAAGGAGTTCGTGCCGCGGTGGCACCGCCACGCCGCCGCCGC
CGACGACGACGACGCCGCCAGGAGGACGAAGCTCTCCGCGGACGCGCCGGAGTTCGTCTA
CGAGGGGTTCTGGCGAGGCGTTGATGGTCTCACCGGCTACGGCTACGGCTACGGCGACGG
CCACGACGGCGCGCCGGAGGAGCTCGTCGTCGTCGTCTCGGAGCGCCTCAACCCGGACGC
GCCGGAGTTCACCGCCGCCGCCTCGATCCGCCGGAGAAGATCGCCGGGGAGCGGGAATGG
CATCTCCTCCACCCGCCACTGGAGTAGGAGGGGTAGTAGAAACTTCTCCAGACAAGGAAG
ATCAGCCCCGTTTTCTTCTAGGGTGCGAAGGGCCCAGAAGGAAGAGTTTGTGAGAAGAAC
AATATTTGTCAGTGATATAGACCATACTGTTACTGAGGACATGTTAGCTGAACTGTTCGG
GAGCTATTGCAGCGTGGTGGTGGATTGCCGCATCTGTGGAGATCACTCATCTGGCCTTAG
GTTTGCATTTATTGAATTTCAAGATGAGAGTGATGCTTATGCTGCATTGGATCTTGATGG
GTATGTTCTTGGCATTTGCCCTCTTAGGGTTTCACCTTCCAAGACTGCAATCATGCCTGT
GAACCCTTCTTTTCTTCCTCAGTCTGAAGCTGAGAGGGAGATGTGCTCAAGAACAATCTA
TTGCACAAACATCGACAAGAGTGTCAATGTAACAGATTTGAAATACTTCTGCGAGGAACA
CTTTGGTCAGGTTTTCCGCCTAAAACTGTTAGGTGATGATGGTCACCCCACCCGCATAGC
TTTTATTGAGTTTGCTGAGGTTGATGGTGCTATTAACGCCCTGAACTCCAGTGGCATATT
TGCAAGTGGCCAGCCTATCAGGGTGTGCCCTTCAAAGACGCCGATCAGGAGCGTCGCGTC
CTACTACTCCACATCAGCTAATACCATGACATCGAACTGACCGTCATCTGGCGTGTCTCC
ATTGCCGTTCAATTGATCGACATCGCCTGGAGATATCTGCTACATATATATATATATATA
TATATATATTTATTTATTTATCAGTTCATCATATGCTGCAGTACTGCATGTATGGTGTTG
CTTCAGCTAGTTGTAGTTTCGATCCCTGTTGAGTTTCTCCTTCAAAGAACCTGCATACTG
TGAATCTGTGATCGACCGGCCTGAAGACAGACAGCTGAAATGGATTGATTTCTTACTTGT
CCCTGGTCATGTATGTGCATGTGTGATGAGGAGATTGCTTGGTTGTAGTGTACCTGAGAC
TGTATCCATTGTTAATTCCTCCAGAGAGTTGTGTTTTCTGTTGTCTCAGCTGTGTACCAA
ATATTTATACTTGGTCGGCTTTAATTTCTTAATTAGTCTCTTTATTGATAGCTTGGCATC