Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0311600-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:8348957:8354350:-1 gene:Os09g0311600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NBS-LRR type resistance protein (Fragment). (Os09t0311600-01)
Sequence	ATGTCGTGCTGCCTCTGCGCCTCTGAAGACGCCATCGACGAAGCAAGGTGTTCATCCTGT GGAAACCAAGATATGGCTTCCAATCATCATTCGCAATCAATTTTCTCGGCCGTGCTTTGC AGCTTCGGCAACTGTTTGCAACTGAATATTGCGTATGCTTTCAAACCTGAAGAGGTTCTT GTCAAGCTCACTGAATTCAATAGAAGGTTGGAGGCTAGGAGTGATGACATAAAACTAATG ATCAGTATGGCTGGGAGCAAACAACAAACCTGTAAGCATGAAGTGCTAGATTGGCTTCAA ACAGTTGAGCTGGCCCGAACTGAAGTTGATGCAATACTGCAAGATTATAGCAAAAGATCC AAACACCTGATCTCAAATTTCAACATCAGCAGGAGAGCCTCTGACAAACTGGAGGAATTG GTTGACCTGTATGACAGAGGTTCTTTTGAAGTTGTATCTGTTGATGGACCTCTACCTTCC ATTGAGGAGAAGCCTATCAGGGAAAAATTGGTTGGAATGCATTTAAATGTGATGAAAGTT CTGAGCTATCTACTTGATGCAAAAATCAGGTTAATTGGCATATGGGGCATGGGGGGAGTA GGAAAGACAATCTTCTTGAAGGTCATCAATAACCAGTTTCTTGGTGTTGTTGACAATATG CCCTTTGATCATATTATGTGTGTTGCAGCAGCCAGGGGTTGCGTCCTGGAAAATCTTCAG ATGAACATAGCAGAGAAGCTGGGATTGCTCTCGAAGCAGGGAGATAGCATAGAATCTCGT GCCGCAACCATCTTCAACCATCTGAAGAACAAGAACTTTTTGCTGCTCCTGGATGACCTT TGGGAGCACGTTGATCTTCTAGAGGTTGGCATTCCACCTCCAAATGAATCGAAGATCCAG AAAGTAGTCTTTGCTACTCGCTCTGAGGAAATTTGTTGTGTGATGGAAGCCGATAAAAGA ATCAAACTGGAATGTTTGCAGCCTGATGAGGCATGGGAGCTGTTCAAATACAGTGCTACA GAAGAAACAATATGTGCAGATATGCCGATAGAAAATGTCGCGAAAAGAGTTTGTGCAAAA TGCCGTGGTTTGCCTTTGGCACTAATCACTGTTGGGAGGTCCATGCGTGCAAAGAGAACG TGGCGCGAGTGGGAGAATGCCCTGTCAACTTTTGATGAGAGCACTCAGCTTTTGGAAGCT TCAGAGATGAAGGTCATTAACCCTATTCTGAGCACCCTGAGGATTTCCTATGACAATTTG GAGAATGATCAGCTGAAAGAATGTTTTCTGGTTTGCTTGCTATGGCCTGAAGGCTATTCA ATTTGGACAGTTGATCTTGTGAATTGTTGGATTGGTTTGGGTCTCGTCCCTGTCGGTAGA ACAATCAATGATAGCCATAACATTGGATTATCACGAATTGAGAAGTTGAAAAGATTGTGC TTACTGGAGGAAGGTGATATCAAACAATCAGAGGTACGACTCCATGATATTATCCGTGAT ATGGCCCTCTGGATTGCCTCGGACTATAAGGGCAAGAAGGATAGCTGGCTACTGAAGGCT GGGCACCGATTAAGAAATGTGTTAAGCTGTGAAGTTGATTTCAAGAGATGGAAGGGTGCC ACAAGAATATCACTGATGTGCAACTTCTTAGATTCTCTGCCATCAGAGCCGATCAGTTCT GACCTATCTGTGTTAGTTCTGCAGCAAAATTTCCATTTAAAGGATATCCCACCATCCCTT TGTGCAAGCATGGCTGCTCTCAGGTATTTGGACCTTAGCTGGACACAGATTGAACAGCTG CCCAGAGAAGTTTGTTCATTAGTAAACCTTCAGTGCTTAAACCTTGCTGATTCACACATA GCATGTCTGCCGGAAAATTTCGGTGACCTGAAGAACTTACGGTTCTTGAACCTCAGCTAC ACTAACCATCTTAGGAACATACCCAGTGGTGTTATATCTAGTCTGTCCATGCTGAAAATA TTGTACTTATACCAGAGTAAGTACTCAGGCTTTGAATTGGAGTTGAGCAAAAACATTACG GGCAGAAATGATGAATTCAGTTTAGGAGAGCTGAGATGCTTTCACACAGGGCTATCCCTG GGTATTACTGTGAGAAGTGTTGGTGCTCTTCGCACACTATCGCTGCTTCCTGATGCCTAC GTACACCTTCTTGGCGTAGAACAACTGGAAGGGGAGTCCACTGTGAGCCTGAAGCTGCAG AGTACCGTCACGGTGGTAAACTTCAGGATGTGCCTCGGTGTAGAAGAATTGTCAATCGAA CTTGACAATGGCCAAGATCCAGAGAAATCCATTCCGCAGTTGGAGTACCTCACCTTCTGG CGCTTGCCCAAGTTGTCTTCCGTGAAGATTGGTGTGGAGCTCCTCTACATCCGAATGCTA TGTATCGTTGAGAACAATGGGCTTGGCGACATCACCTGGGTGCTCAAACTTCCGCAGCTG GAGCATCTTGATCTGTCATTCTGCAGCAAGCTTAACTCGGTCTTAGCCAACGCAGAAAAT GGAGAGAGAAGAGATGCCAGCAGAGTCCATTGCCTGTCAAGACTCAGGATATTACAGTTA AACCACCTGCCGAGCTTGGAATCAATCTGCACATTTAAGCTGGTCTGCCCTTGTTTGGAA TACATAGATGTGTTTGGCTGCCCATTGCTGAAGGAGCTCCCGTTCCAGTTCCAGCCAGAC AACGGTGGCTTTGCTCGGTTGAAGCAGATCCGTGGAGAAGAACAATGGTGGAACAGTCTG CGGTGGGACGGTGATGCCACCCGTAATATGTTGTTGCCATTTTACAAGGTGTTTGACAAG AACCTAGAGACTTTTGAGCCAGCTCTTGGCACCAATCCGTTCGTCCAAGCTTCAGGGTCA TTCTTCGCACATCGCAAACCAATGATGAGGACGGCTATTCAGTTCTCGTCATATCTCTCG CTGCTCTTTGGAGCACAGGTGGCATCGACCAATTAA

Peptide Sequence

PEP ID	Os09t0311600-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:8348957:8354350:-1 gene:Os09g0311600 transcript:Os09t0311600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NBS-LRR type resistance protein (Fragment). (Os09t0311600-01)
Sequence	MSCCLCASEDAIDEARCSSCGNQDMASNHHSQSIFSAVLCSFGNCLQLNIAYAFKPEEVL VKLTEFNRRLEARSDDIKLMISMAGSKQQTCKHEVLDWLQTVELARTEVDAILQDYSKRS KHLISNFNISRRASDKLEELVDLYDRGSFEVVSVDGPLPSIEEKPIREKLVGMHLNVMKV LSYLLDAKIRLIGIWGMGGVGKTIFLKVINNQFLGVVDNMPFDHIMCVAAARGCVLENLQ MNIAEKLGLLSKQGDSIESRAATIFNHLKNKNFLLLLDDLWEHVDLLEVGIPPPNESKIQ KVVFATRSEEICCVMEADKRIKLECLQPDEAWELFKYSATEETICADMPIENVAKRVCAK CRGLPLALITVGRSMRAKRTWREWENALSTFDESTQLLEASEMKVINPILSTLRISYDNL ENDQLKECFLVCLLWPEGYSIWTVDLVNCWIGLGLVPVGRTINDSHNIGLSRIEKLKRLC LLEEGDIKQSEVRLHDIIRDMALWIASDYKGKKDSWLLKAGHRLRNVLSCEVDFKRWKGA TRISLMCNFLDSLPSEPISSDLSVLVLQQNFHLKDIPPSLCASMAALRYLDLSWTQIEQL PREVCSLVNLQCLNLADSHIACLPENFGDLKNLRFLNLSYTNHLRNIPSGVISSLSMLKI LYLYQSKYSGFELELSKNITGRNDEFSLGELRCFHTGLSLGITVRSVGALRTLSLLPDAY VHLLGVEQLEGESTVSLKLQSTVTVVNFRMCLGVEELSIELDNGQDPEKSIPQLEYLTFW RLPKLSSVKIGVELLYIRMLCIVENNGLGDITWVLKLPQLEHLDLSFCSKLNSVLANAEN GERRDASRVHCLSRLRILQLNHLPSLESICTFKLVCPCLEYIDVFGCPLLKELPFQFQPD NGGFARLKQIRGEEQWWNSLRWDGDATRNMLLPFYKVFDKNLETFEPALGTNPFVQASGS FFAHRKPMMRTAIQFSSYLSLLFGAQVASTN

Transcript Sequence

Transcript ID	Os09t0311600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:8348957:8354350:-1 gene:Os09g0311600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NBS-LRR type resistance protein (Fragment). (Os09t0311600-01)
Sequence	ATCTTCATATTGCTGGTTGATGTGCTTGAGCCTGGGTGAATGTCGTGCTGCCTCTGCGCC TCTGAAGACGCCATCGACGAAGCAAGGTGTTCATCCTGTGGAAACCAAGATATGGCTTCC AATCATCATTCGCAATCAATTTTCTCGGCCGTGCTTTGCAGCTTCGGCAACTGTTTGCAA CTGAATATTGCGTATGCTTTCAAACCTGAAGAGGTTCTTGTCAAGCTCACTGAATTCAAT AGAAGGTTGGAGGCTAGGAGTGATGACATAAAACTAATGATCAGTATGGCTGGGAGCAAA CAACAAACCTGTAAGCATGAAGTGCTAGATTGGCTTCAAACAGTTGAGCTGGCCCGAACT GAAGTTGATGCAATACTGCAAGATTATAGCAAAAGATCCAAACACCTGATCTCAAATTTC AACATCAGCAGGAGAGCCTCTGACAAACTGGAGGAATTGGTTGACCTGTATGACAGAGGT TCTTTTGAAGTTGTATCTGTTGATGGACCTCTACCTTCCATTGAGGAGAAGCCTATCAGG GAAAAATTGGTTGGAATGCATTTAAATGTGATGAAAGTTCTGAGCTATCTACTTGATGCA AAAATCAGGTTAATTGGCATATGGGGCATGGGGGGAGTAGGAAAGACAATCTTCTTGAAG GTCATCAATAACCAGTTTCTTGGTGTTGTTGACAATATGCCCTTTGATCATATTATGTGT GTTGCAGCAGCCAGGGGTTGCGTCCTGGAAAATCTTCAGATGAACATAGCAGAGAAGCTG GGATTGCTCTCGAAGCAGGGAGATAGCATAGAATCTCGTGCCGCAACCATCTTCAACCAT CTGAAGAACAAGAACTTTTTGCTGCTCCTGGATGACCTTTGGGAGCACGTTGATCTTCTA GAGGTTGGCATTCCACCTCCAAATGAATCGAAGATCCAGAAAGTAGTCTTTGCTACTCGC TCTGAGGAAATTTGTTGTGTGATGGAAGCCGATAAAAGAATCAAACTGGAATGTTTGCAG CCTGATGAGGCATGGGAGCTGTTCAAATACAGTGCTACAGAAGAAACAATATGTGCAGAT ATGCCGATAGAAAATGTCGCGAAAAGAGTTTGTGCAAAATGCCGTGGTTTGCCTTTGGCA CTAATCACTGTTGGGAGGTCCATGCGTGCAAAGAGAACGTGGCGCGAGTGGGAGAATGCC CTGTCAACTTTTGATGAGAGCACTCAGCTTTTGGAAGCTTCAGAGATGAAGGTCATTAAC CCTATTCTGAGCACCCTGAGGATTTCCTATGACAATTTGGAGAATGATCAGCTGAAAGAA TGTTTTCTGGTTTGCTTGCTATGGCCTGAAGGCTATTCAATTTGGACAGTTGATCTTGTG AATTGTTGGATTGGTTTGGGTCTCGTCCCTGTCGGTAGAACAATCAATGATAGCCATAAC ATTGGATTATCACGAATTGAGAAGTTGAAAAGATTGTGCTTACTGGAGGAAGGTGATATC AAACAATCAGAGGTACGACTCCATGATATTATCCGTGATATGGCCCTCTGGATTGCCTCG GACTATAAGGGCAAGAAGGATAGCTGGCTACTGAAGGCTGGGCACCGATTAAGAAATGTG TTAAGCTGTGAAGTTGATTTCAAGAGATGGAAGGGTGCCACAAGAATATCACTGATGTGC AACTTCTTAGATTCTCTGCCATCAGAGCCGATCAGTTCTGACCTATCTGTGTTAGTTCTG CAGCAAAATTTCCATTTAAAGGATATCCCACCATCCCTTTGTGCAAGCATGGCTGCTCTC AGGTATTTGGACCTTAGCTGGACACAGATTGAACAGCTGCCCAGAGAAGTTTGTTCATTA GTAAACCTTCAGTGCTTAAACCTTGCTGATTCACACATAGCATGTCTGCCGGAAAATTTC GGTGACCTGAAGAACTTACGGTTCTTGAACCTCAGCTACACTAACCATCTTAGGAACATA CCCAGTGGTGTTATATCTAGTCTGTCCATGCTGAAAATATTGTACTTATACCAGAGTAAG TACTCAGGCTTTGAATTGGAGTTGAGCAAAAACATTACGGGCAGAAATGATGAATTCAGT TTAGGAGAGCTGAGATGCTTTCACACAGGGCTATCCCTGGGTATTACTGTGAGAAGTGTT GGTGCTCTTCGCACACTATCGCTGCTTCCTGATGCCTACGTACACCTTCTTGGCGTAGAA CAACTGGAAGGGGAGTCCACTGTGAGCCTGAAGCTGCAGAGTACCGTCACGGTGGTAAAC TTCAGGATGTGCCTCGGTGTAGAAGAATTGTCAATCGAACTTGACAATGGCCAAGATCCA GAGAAATCCATTCCGCAGTTGGAGTACCTCACCTTCTGGCGCTTGCCCAAGTTGTCTTCC GTGAAGATTGGTGTGGAGCTCCTCTACATCCGAATGCTATGTATCGTTGAGAACAATGGG CTTGGCGACATCACCTGGGTGCTCAAACTTCCGCAGCTGGAGCATCTTGATCTGTCATTC TGCAGCAAGCTTAACTCGGTCTTAGCCAACGCAGAAAATGGAGAGAGAAGAGATGCCAGC AGAGTCCATTGCCTGTCAAGACTCAGGATATTACAGTTAAACCACCTGCCGAGCTTGGAA TCAATCTGCACATTTAAGCTGGTCTGCCCTTGTTTGGAATACATAGATGTGTTTGGCTGC CCATTGCTGAAGGAGCTCCCGTTCCAGTTCCAGCCAGACAACGGTGGCTTTGCTCGGTTG AAGCAGATCCGTGGAGAAGAACAATGGTGGAACAGTCTGCGGTGGGACGGTGATGCCACC CGTAATATGTTGTTGCCATTTTACAAGGTGTTTGACAAGAACCTAGAGACTTTTGAGCCA GCTCTTGGCACCAATCCGTTCGTCCAAGCTTCAGGGTCATTCTTCGCACATCGCAAACCA ATGATGAGGACGGCTATTCAGTTCTCGTCATATCTCTCGCTGCTCTTTGGAGCACAGGTG GCATCGACCAATTAACAGGTCTGTCGGTTTTTTATTTAAGAATCGAATCAAATACATCGT CTGGCTAAATTTCTAATAACTCCTCCTCTTGAAATGGTGGACCAGCACCCACTTGAATGT ATTTCCAATGTACTACTATTGCTAGAATTGCAAATATCCT