Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0309100-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:8166016:8169041:-1 gene:Os09g0309100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, SWIM-type domain containing protein. (Os09t0309100-01);Similar to predicted protein. (Os09t0309100-02);Similar to predicted protein. (Os09t0309100-03)
Sequence	ATGGGGACGGAGGCGGAGGCGGCGGAGGTGGTGGAGTCGGTGAGCGACCTCGCCGTGCAG GACCCTCCCGGGGAGGAGTTCTCCGCGGCGGACCTCCGGTGGGTCAAGTACGCGAGCTCC GAGCACCAGCGGGACGACGTGGCGCTCATCCCCTACGAGCGGATGGACGCCTTCATCGCC GGCGAATGCAGCAACCCGGAGTGCCCCACGCGCTTCCACATCGAGCGCGGCCGCAAGCGC GACCGCGGCACCCTCCGGGAGGTCAGGAGCGACGACTACCTTCTCTACAGGATGTACTGG TGCTCGTTCGGCCCGGAGAATTACGGCGAGGGAGGGACGATCTTGCCGAGCAGGAAGTAT AGGCTCAACACGAGGAATCGTGCCGCTCGTCCGCAGTCGATGCGTGGCTGCACCTGCCAC TTTGCCATCAAGCGGCTATATGCCCGCCCGTCCCTGGTGCTCATTATCTACCATGAGAGG CGGCATATCAACAAGTCTGGTTTCATATGCCATGGTCCCTTGGACCGGGACGCCATTGGG CCGGGTGCCAGGAGGGTGCCGTATGTGGGGAGCGAGATCCAGCAGCAGACCATGTCGCTG ATTTACCTTGGTGTGCCGGAGGAGAACATCCTGCAGACACATATGGAAGGGATACATCGT TACTGCGGCTCGGACGCGAAGGTTGATAGCCTCGCTTCACAGTATGTCCAGAAGCTTGGG ATGATCATCAAGAGGTCTACGCATGAGCTGGATCTTGATGACCAGGCTAGCATCAGAATG TGGGTTGATAGGAACAAGAAGTCTGTGTTCTACTACCAGGATTCGACGGATACAGATGCA TTTGTTCTAGGGATCCAGACAGAGTGGCAACTGCAGCAGATGATTCGCTTTGGTCATCAG GATCTTTTGGCTTCTCATTCCTCGTTTGGTGTTAGCAAGCTGAAGTATCCATTGCACACA CTCCTTGTCTTTGACTCAAGACAACATGCTCTACCTGTTGCGTGGATTATAACCCGATCA GTTACCAAGCAAGACACTTTGAGATGGATGAAAGCACTTACTGAGAGAATATATTCTGTT GATTCCACCTGGAGAATCGGTGGATTTGTAATTGATGACCCAGCTTCAGAGCTGGATCCA ATCAGGGATGTATTCTCTTGCCCAATTTTGTTTTCTTTATGGCACATTAGGAGAACCTGG CTTAAAAATATAATCAAGAAATGCAGCAACAGTGAGGTACAGCGGGAAATGTTTATGCAA CTAGGAAAAGTTATGTACAGTATCTGGAGTGAGAAAAATCCCATGGATGCTCTTGAGCAA TTATTTCAAGACTTCGTTGACCAAACCACCTTCATACAATATTTCAAGTCCTTTTGGGTT CCCAAATTGGAGATGTGGATTGACACCATCAGAAGTCTTCCACTAGCAAGTCAGGAATCA TCAGGCACTATTGAAGGTTACCATCTAAAGCTCAAGGTTAAAGCATATGATGACTCACAG CTTGATGCTCTCCAGCGTGTGGACTGGTTGGTGCATAAGCTCACAACAGAGCTCCATTCG AGTTACTGGCTCAATCTGTATGCGGATGAAAGCGGTTCATTTCCTGAGGTGAAAGCAGAG TACATTGCGTCCACTTCATGGCATAGAGCGCTGCAGATACCTGACGATGCTGTTATATTT GATGACAAGGAACCATTTTCAGCAAAGGTGACAAGCCAGAAGGATACTAGTCAGATGTGG ACTGTCTGGAATCCTGGGTCTGAGTTTTCTCTTTGTGATTGTTCGTGGTCAATGCAGGGC AACCTATGTAAGCACATCATAAAGGTTAACATGATGTGTGGACCACGCAAGGATTTCCAG CCCTCGCTCTCATTTCAATCGTTTCAGCGTGTCCTACTTGATCTGTGGCAAAAACCCATG GATGATTCATTCTCACTCGATCTGTCAGTAGCATGGGTTATGCAAATGCAGGAGAGGATC CAGAAGGTGACTGAGCTTGCTACCGCTGACGGCATTGCGGAAGTATCTAACAGATTGCCG ATTCAATGGACAAACAAGAAAGGGAGGAAAGTAGCTGCAAAGCGCACCAGCCCTTTACGT GTTCTTCCTCACTCCAATGGTATTGTGCAAAAGGATTTCACACCCAAGAAGAACAGAAAG AGAAAGAGGTTGTCAACAGTCTCGGGTTAA

Peptide Sequence

PEP ID	Os09t0309100-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:8166016:8169041:-1 gene:Os09g0309100 transcript:Os09t0309100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, SWIM-type domain containing protein. (Os09t0309100-01);Similar to predicted protein. (Os09t0309100-02);Similar to predicted protein. (Os09t0309100-03)
Sequence	MGTEAEAAEVVESVSDLAVQDPPGEEFSAADLRWVKYASSEHQRDDVALIPYERMDAFIA GECSNPECPTRFHIERGRKRDRGTLREVRSDDYLLYRMYWCSFGPENYGEGGTILPSRKY RLNTRNRAARPQSMRGCTCHFAIKRLYARPSLVLIIYHERRHINKSGFICHGPLDRDAIG PGARRVPYVGSEIQQQTMSLIYLGVPEENILQTHMEGIHRYCGSDAKVDSLASQYVQKLG MIIKRSTHELDLDDQASIRMWVDRNKKSVFYYQDSTDTDAFVLGIQTEWQLQQMIRFGHQ DLLASHSSFGVSKLKYPLHTLLVFDSRQHALPVAWIITRSVTKQDTLRWMKALTERIYSV DSTWRIGGFVIDDPASELDPIRDVFSCPILFSLWHIRRTWLKNIIKKCSNSEVQREMFMQ LGKVMYSIWSEKNPMDALEQLFQDFVDQTTFIQYFKSFWVPKLEMWIDTIRSLPLASQES SGTIEGYHLKLKVKAYDDSQLDALQRVDWLVHKLTTELHSSYWLNLYADESGSFPEVKAE YIASTSWHRALQIPDDAVIFDDKEPFSAKVTSQKDTSQMWTVWNPGSEFSLCDCSWSMQG NLCKHIIKVNMMCGPRKDFQPSLSFQSFQRVLLDLWQKPMDDSFSLDLSVAWVMQMQERI QKVTELATADGIAEVSNRLPIQWTNKKGRKVAAKRTSPLRVLPHSNGIVQKDFTPKKNRK RKRLSTVSG

Transcript Sequence

Transcript ID	Os09t0309100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:8166016:8169041:-1 gene:Os09g0309100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, SWIM-type domain containing protein. (Os09t0309100-01);Similar to predicted protein. (Os09t0309100-02);Similar to predicted protein. (Os09t0309100-03)
Sequence	CTTTCTCATTCTCTCTCTAGGGTTGCGGCCGCACCAAACCCCCACCCCCCCCCCAACTCC GGCGACCGGCGGCCGGCGGCGCACGCCCATAACCCTCCCATGCCGCCTCACCGGTGACCA CCTACCCGCCCTTCCCAAGATCCCCCTTCGATTCATCTGATTAGCGCGAGCAGCGAGGTT CGGCGCGGCGGGATGGGGACGGAGGCGGAGGCGGCGGAGGTGGTGGAGTCGGTGAGCGAC CTCGCCGTGCAGGACCCTCCCGGGGAGGAGTTCTCCGCGGCGGACCTCCGGTGGGTCAAG TACGCGAGCTCCGAGCACCAGCGGGACGACGTGGCGCTCATCCCCTACGAGCGGATGGAC GCCTTCATCGCCGGCGAATGCAGCAACCCGGAGTGCCCCACGCGCTTCCACATCGAGCGC GGCCGCAAGCGCGACCGCGGCACCCTCCGGGAGGTCAGGAGCGACGACTACCTTCTCTAC AGGATGTACTGGTGCTCGTTCGGCCCGGAGAATTACGGCGAGGGAGGGACGATCTTGCCG AGCAGGAAGTATAGGCTCAACACGAGGAATCGTGCCGCTCGTCCGCAGTCGATGCGTGGC TGCACCTGCCACTTTGCCATCAAGCGGCTATATGCCCGCCCGTCCCTGGTGCTCATTATC TACCATGAGAGGCGGCATATCAACAAGTCTGGTTTCATATGCCATGGTCCCTTGGACCGG GACGCCATTGGGCCGGGTGCCAGGAGGGTGCCGTATGTGGGGAGCGAGATCCAGCAGCAG ACCATGTCGCTGATTTACCTTGGTGTGCCGGAGGAGAACATCCTGCAGACACATATGGAA GGGATACATCGTTACTGCGGCTCGGACGCGAAGGTTGATAGCCTCGCTTCACAGTATGTC CAGAAGCTTGGGATGATCATCAAGAGGTCTACGCATGAGCTGGATCTTGATGACCAGGCT AGCATCAGAATGTGGGTTGATAGGAACAAGAAGTCTGTGTTCTACTACCAGGATTCGACG GATACAGATGCATTTGTTCTAGGGATCCAGACAGAGTGGCAACTGCAGCAGATGATTCGC TTTGGTCATCAGGATCTTTTGGCTTCTCATTCCTCGTTTGGTGTTAGCAAGCTGAAGTAT CCATTGCACACACTCCTTGTCTTTGACTCAAGACAACATGCTCTACCTGTTGCGTGGATT ATAACCCGATCAGTTACCAAGCAAGACACTTTGAGATGGATGAAAGCACTTACTGAGAGA ATATATTCTGTTGATTCCACCTGGAGAATCGGTGGATTTGTAATTGATGACCCAGCTTCA GAGCTGGATCCAATCAGGGATGTATTCTCTTGCCCAATTTTGTTTTCTTTATGGCACATT AGGAGAACCTGGCTTAAAAATATAATCAAGAAATGCAGCAACAGTGAGGTACAGCGGGAA ATGTTTATGCAACTAGGAAAAGTTATGTACAGTATCTGGAGTGAGAAAAATCCCATGGAT GCTCTTGAGCAATTATTTCAAGACTTCGTTGACCAAACCACCTTCATACAATATTTCAAG TCCTTTTGGGTTCCCAAATTGGAGATGTGGATTGACACCATCAGAAGTCTTCCACTAGCA AGTCAGGAATCATCAGGCACTATTGAAGGTTACCATCTAAAGCTCAAGGTTAAAGCATAT GATGACTCACAGCTTGATGCTCTCCAGCGTGTGGACTGGTTGGTGCATAAGCTCACAACA GAGCTCCATTCGAGTTACTGGCTCAATCTGTATGCGGATGAAAGCGGTTCATTTCCTGAG GTGAAAGCAGAGTACATTGCGTCCACTTCATGGCATAGAGCGCTGCAGATACCTGACGAT GCTGTTATATTTGATGACAAGGAACCATTTTCAGCAAAGGTGACAAGCCAGAAGGATACT AGTCAGATGTGGACTGTCTGGAATCCTGGGTCTGAGTTTTCTCTTTGTGATTGTTCGTGG TCAATGCAGGGCAACCTATGTAAGCACATCATAAAGGTTAACATGATGTGTGGACCACGC AAGGATTTCCAGCCCTCGCTCTCATTTCAATCGTTTCAGCGTGTCCTACTTGATCTGTGG CAAAAACCCATGGATGATTCATTCTCACTCGATCTGTCAGTAGCATGGGTTATGCAAATG CAGGAGAGGATCCAGAAGGTGACTGAGCTTGCTACCGCTGACGGCATTGCGGAAGTATCT AACAGATTGCCGATTCAATGGACAAACAAGAAAGGGAGGAAAGTAGCTGCAAAGCGCACC AGCCCTTTACGTGTTCTTCCTCACTCCAATGGTATTGTGCAAAAGGATTTCACACCCAAG AAGAACAGAAAGAGAAAGAGGTTGTCAACAGTCTCGGGTTAACAGTACTCCAATTGTTCT TGTCCAGAGAGTTATTTTTCTCTCTGTGTAATTAGATGGCTAACCGTCTTTTGTTTGTTT TCTGTCTCAACTAGTTACTTTTGGTATAGGCATTGGTTACTAGGATGATCACCTCACGTT TCTGAAACCAATTCTTCTGTTGTTTAGTTGGATATAATTATTCAGGCAGCATAAG