Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0298700-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:7293013:7300542:-1 gene:Os09g0298700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA recognition motif description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os09t0298700-01)
Sequence	ATGGGGAGACCTCGAGGCCGCGGCGGAGGAGGAGGAGGAGGGAGGGGGAGGTTCGGCGGC GGCGGGGGGTCCCGCTTCTCCGCCGCCCGCGATGACCCGCCGCCGCGGCGCTCCTCCTCC GGGTGGGGGGTGGCACCGCCGTCGCGGCACCTGTGGGTGGGCAGCCTCTCCCCGGGCGTC GCCGCGGCCGACCTCTCGGAGCTCTTCCTCCGGTGCGGCGACGTCGAGGGCATCTCCCGT GACCCCGGCCGGAGCTTCGCGTTCGTGACGTTCGCGCGGGAGGAGGACGCCGTGGCGGCG GTGCGGGAGCTGCAGGGGATCCACCTCCGCGGGGCGCCCATTAGGATCGAGTTTTCCAAG GGGGATAAAGGTTCAAGTAGCTCTATGGATGACAGATACTCACAACATGCTGATCAAAGA CGTTTTACTGAACGAGGAAGGAATCAGCAATCAAGTCCTGAAAAATCAACTGATAAATCC AAAAGAAGCAGGCCAGCAGAACCTAGTGAAGTATTATGGATAGGTTTTCCTGTTGGTCTG AAGGTAGATGAGGCAACTCTCTGGGAAGCCTTTTCACCTTTTGGTGAGGTTGTCAAGATA ACTACATTCCCAGGGCGTACTTATGCATTTGTCCAGTACACTACTATTGCAGCGGCATGC AGGGCGAAGGAAACACTGCAGGGAAATATTTTCAATAACCCTCGAGTTAGCATTTGCTTT TCTCGGAGTGACAGTGTTTCAGCAGAATTTGGAAAAGGTTCCTTAGATGCCCCATATTCC CCCCATTTAAACTCTAGTGTTAGACCTATATTCAGGGAGCAAGATTTTGAAGATTTTCCT AGGGCTAGGCCTTTTGATAGTCCTCCAAGAGATATGTACATGCCATCTCCACATTATGGC CCTAAGAGACTTTCTAGAGATCATGATGATGTGGGTTTCAGCAGGGATAATTATTTGCGA TATGGACCTGGAGTAGAGCCTGATCCTAGATCTAATTTTGAACCTTTTAGGATACAAGGG CTCGGTCCAGAAAGAAGGATGTCTGAGGACCCATATGAACAGCATAGGCGTAGCCCTGCT GGTGATGCACCATGGCACAACATTCCATTCGAGCGATCTCAGGGAGCCTTACCATTAGAG GATTCTCGGTATGCTAGGGAAGATCCATACCCATTTTCAAAGAAGTTGAGGACTGGTGAA GCACATGACTCTGAACTTCCTGAATACCCTTTCTCTGAATTTGATCGAGGGAAGGTTGGC TCTGCCTACCCAAGGAGGCCCTTCTATGGTGTGCCAGATGATGACATACACCCCAGAGGC TATCAACTTGCTCCTATGCATGGTAGAAATCATGTTGATCCTTTAAGGAATCCAACTCCA CTTGTAGATAGGCATATACCAGGGCATGCACAGGACAGCTTTTCTAGGCATGTAGAAGTG GAAAGATCAACTCCTGAATACCATGAACCCCTTCTCAAGGAAGAATGGAAATGGGATGGT ACAATAGCAAAGGGAGGCACACCAATTTGCCGAGCGCGATGCTTCCCTGTTGGGAAGGTT CTTAACTTCATGCTGCCCGAATTTTTGGATTGCACTGCTAGGACAAGCCTGGAGATGCTC TCTAAGCACTATTACCAAGCTGCCAGCAGCTGGGTGGTGTTTTTTGTTCCAGAAAATGAT GCTGACATGGCAGCCTATAATGAATTCATGAATTACCTTGGTGATAAGCAGCGTGCAGCA GTTTGTAAACTTGGAGAAAGGAGCAGCTTATTTCTTGTTCCACCCTCAGACTTCTCTGAA CAAGTACTGAGGGTTCCAGGTAAAGTCAGCATATCTGGAGTCATTCTGAAGTTTGAGCAG TCAGATCCAGAAGTTTCCTCGCCAACTCGCAAACCAGAAACATTTGTGAGTCATTTGAAC CATGATGTTCGTGCTCATGAGGATCTAGATGCATTGAGAAGAATCAACCCACCAGATATC AGGCCACTTCCTCAGGGTTCAGATTATCTCGGGTTGTCGCCTGGAAGCTATAATCCAGCA AGTGCACATTTGGTTCCGCCTTACAAGTTTGGAAATGCTCCTTCATATCTAGAATCTGAA TTAGCTCATCAAAAGCATCCACCTGACTCCCACAGGGAGATAGCACATGACAAGCAGCAG CAACACCCAGATGTATTGCCCTCAAGATGGTCAGATAACATTTACAATCCAAGTCCAGGT TCTGGAAATTTGAATTATTTGGCTGAGAGTGCGATCCCACATACATCAACTGATAGGACA CCAGAGGCATACTCATTTGCTCCTCAAGGAGTACCAAAAGTGAGTACATCAGGGTATGCA CCAGTTGCAGATGAGGCATCAAACATGTCCTACCCTCCCATGCAACCTGCATCACAGCAG GTAGTTAGACCTCAACAACCTCCATCTCTCCCATTATCGCTTCCACCAGAGCAACTTGCA CAATTGGCCACTCTTCTTGCACAACAAAACCAACCAGGAAAAGAGCCTGTGGACAGCTTA AACAAAGAATCAGGATTCATACGGAATCCACATGGACATTCTTCAATGATGCCACACAGC TCAGGTTCTATCCCTGTCCAAAACTCATTGCCACCTGCTCCGCCATCTGCATCACAGTTA CAGGTTCATGCGCCACCAGTTCAAGGTTCAGTGCCACCAAATCCATCCATTATGCATACA CCGAATGCTCCTATGCCTTCTCACAACACTTTGCCTTTACCCCCTATGCATCCTTCGGGA AATCCAGCTCATTCTTCCATGCCTTTGAGATCGTTCGTCCCTCCTCTTCCTGAAGGCCCT CCACCCCTTAGGCAGCACACATCAAGTGCTCTACAAGCGCAACCTGCACTTCCCTCTGGA CCACAGACTAGCCAGCAACCGTCTGCTCAGGAAGACCATCACGGAGACCCTCAAAAGCGC CTTCAAGCAACATTGCAATTGGCAGCAACCCTACTTCAGCAGATACAGCAACAATCTAAA CCTGGTGGCCAGAAGTAG

Peptide Sequence

PEP ID	Os09t0298700-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:7293013:7300542:-1 gene:Os09g0298700 transcript:Os09t0298700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA recognition motif description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os09t0298700-01)
Sequence	MGRPRGRGGGGGGGRGRFGGGGGSRFSAARDDPPPRRSSSGWGVAPPSRHLWVGSLSPGV AAADLSELFLRCGDVEGISRDPGRSFAFVTFAREEDAVAAVRELQGIHLRGAPIRIEFSK GDKGSSSSMDDRYSQHADQRRFTERGRNQQSSPEKSTDKSKRSRPAEPSEVLWIGFPVGL KVDEATLWEAFSPFGEVVKITTFPGRTYAFVQYTTIAAACRAKETLQGNIFNNPRVSICF SRSDSVSAEFGKGSLDAPYSPHLNSSVRPIFREQDFEDFPRARPFDSPPRDMYMPSPHYG PKRLSRDHDDVGFSRDNYLRYGPGVEPDPRSNFEPFRIQGLGPERRMSEDPYEQHRRSPA GDAPWHNIPFERSQGALPLEDSRYAREDPYPFSKKLRTGEAHDSELPEYPFSEFDRGKVG SAYPRRPFYGVPDDDIHPRGYQLAPMHGRNHVDPLRNPTPLVDRHIPGHAQDSFSRHVEV ERSTPEYHEPLLKEEWKWDGTIAKGGTPICRARCFPVGKVLNFMLPEFLDCTARTSLEML SKHYYQAASSWVVFFVPENDADMAAYNEFMNYLGDKQRAAVCKLGERSSLFLVPPSDFSE QVLRVPGKVSISGVILKFEQSDPEVSSPTRKPETFVSHLNHDVRAHEDLDALRRINPPDI RPLPQGSDYLGLSPGSYNPASAHLVPPYKFGNAPSYLESELAHQKHPPDSHREIAHDKQQ QHPDVLPSRWSDNIYNPSPGSGNLNYLAESAIPHTSTDRTPEAYSFAPQGVPKVSTSGYA PVADEASNMSYPPMQPASQQVVRPQQPPSLPLSLPPEQLAQLATLLAQQNQPGKEPVDSL NKESGFIRNPHGHSSMMPHSSGSIPVQNSLPPAPPSASQLQVHAPPVQGSVPPNPSIMHT PNAPMPSHNTLPLPPMHPSGNPAHSSMPLRSFVPPLPEGPPPLRQHTSSALQAQPALPSG PQTSQQPSAQEDHHGDPQKRLQATLQLAATLLQQIQQQSKPGGQK

Transcript Sequence

Transcript ID	Os09t0298700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:7293013:7300542:-1 gene:Os09g0298700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA recognition motif description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os09t0298700-01)
Sequence	GAGAGAGAGAGAGCACCCATCCATCTCCCCGGAGGCGAAACCCTAACCCACCCAACCCAT CGCCGCCGGCGAAAACCCTAATCCATCCGCCGCCGAACCGAAATGGGGAGACCTCGAGGC CGCGGCGGAGGAGGAGGAGGAGGGAGGGGGAGGTTCGGCGGCGGCGGGGGGTCCCGCTTC TCCGCCGCCCGCGATGACCCGCCGCCGCGGCGCTCCTCCTCCGGGTGGGGGGTGGCACCG CCGTCGCGGCACCTGTGGGTGGGCAGCCTCTCCCCGGGCGTCGCCGCGGCCGACCTCTCG GAGCTCTTCCTCCGGTGCGGCGACGTCGAGGGCATCTCCCGTGACCCCGGCCGGAGCTTC GCGTTCGTGACGTTCGCGCGGGAGGAGGACGCCGTGGCGGCGGTGCGGGAGCTGCAGGGG ATCCACCTCCGCGGGGCGCCCATTAGGATCGAGTTTTCCAAGGGGGATAAAGGTTCAAGT AGCTCTATGGATGACAGATACTCACAACATGCTGATCAAAGACGTTTTACTGAACGAGGA AGGAATCAGCAATCAAGTCCTGAAAAATCAACTGATAAATCCAAAAGAAGCAGGCCAGCA GAACCTAGTGAAGTATTATGGATAGGTTTTCCTGTTGGTCTGAAGGTAGATGAGGCAACT CTCTGGGAAGCCTTTTCACCTTTTGGTGAGGTTGTCAAGATAACTACATTCCCAGGGCGT ACTTATGCATTTGTCCAGTACACTACTATTGCAGCGGCATGCAGGGCGAAGGAAACACTG CAGGGAAATATTTTCAATAACCCTCGAGTTAGCATTTGCTTTTCTCGGAGTGACAGTGTT TCAGCAGAATTTGGAAAAGGTTCCTTAGATGCCCCATATTCCCCCCATTTAAACTCTAGT GTTAGACCTATATTCAGGGAGCAAGATTTTGAAGATTTTCCTAGGGCTAGGCCTTTTGAT AGTCCTCCAAGAGATATGTACATGCCATCTCCACATTATGGCCCTAAGAGACTTTCTAGA GATCATGATGATGTGGGTTTCAGCAGGGATAATTATTTGCGATATGGACCTGGAGTAGAG CCTGATCCTAGATCTAATTTTGAACCTTTTAGGATACAAGGGCTCGGTCCAGAAAGAAGG ATGTCTGAGGACCCATATGAACAGCATAGGCGTAGCCCTGCTGGTGATGCACCATGGCAC AACATTCCATTCGAGCGATCTCAGGGAGCCTTACCATTAGAGGATTCTCGGTATGCTAGG GAAGATCCATACCCATTTTCAAAGAAGTTGAGGACTGGTGAAGCACATGACTCTGAACTT CCTGAATACCCTTTCTCTGAATTTGATCGAGGGAAGGTTGGCTCTGCCTACCCAAGGAGG CCCTTCTATGGTGTGCCAGATGATGACATACACCCCAGAGGCTATCAACTTGCTCCTATG CATGGTAGAAATCATGTTGATCCTTTAAGGAATCCAACTCCACTTGTAGATAGGCATATA CCAGGGCATGCACAGGACAGCTTTTCTAGGCATGTAGAAGTGGAAAGATCAACTCCTGAA TACCATGAACCCCTTCTCAAGGAAGAATGGAAATGGGATGGTACAATAGCAAAGGGAGGC ACACCAATTTGCCGAGCGCGATGCTTCCCTGTTGGGAAGGTTCTTAACTTCATGCTGCCC GAATTTTTGGATTGCACTGCTAGGACAAGCCTGGAGATGCTCTCTAAGCACTATTACCAA GCTGCCAGCAGCTGGGTGGTGTTTTTTGTTCCAGAAAATGATGCTGACATGGCAGCCTAT AATGAATTCATGAATTACCTTGGTGATAAGCAGCGTGCAGCAGTTTGTAAACTTGGAGAA AGGAGCAGCTTATTTCTTGTTCCACCCTCAGACTTCTCTGAACAAGTACTGAGGGTTCCA GGTAAAGTCAGCATATCTGGAGTCATTCTGAAGTTTGAGCAGTCAGATCCAGAAGTTTCC TCGCCAACTCGCAAACCAGAAACATTTGTGAGTCATTTGAACCATGATGTTCGTGCTCAT GAGGATCTAGATGCATTGAGAAGAATCAACCCACCAGATATCAGGCCACTTCCTCAGGGT TCAGATTATCTCGGGTTGTCGCCTGGAAGCTATAATCCAGCAAGTGCACATTTGGTTCCG CCTTACAAGTTTGGAAATGCTCCTTCATATCTAGAATCTGAATTAGCTCATCAAAAGCAT CCACCTGACTCCCACAGGGAGATAGCACATGACAAGCAGCAGCAACACCCAGATGTATTG CCCTCAAGATGGTCAGATAACATTTACAATCCAAGTCCAGGTTCTGGAAATTTGAATTAT TTGGCTGAGAGTGCGATCCCACATACATCAACTGATAGGACACCAGAGGCATACTCATTT GCTCCTCAAGGAGTACCAAAAGTGAGTACATCAGGGTATGCACCAGTTGCAGATGAGGCA TCAAACATGTCCTACCCTCCCATGCAACCTGCATCACAGCAGGTAGTTAGACCTCAACAA CCTCCATCTCTCCCATTATCGCTTCCACCAGAGCAACTTGCACAATTGGCCACTCTTCTT GCACAACAAAACCAACCAGGAAAAGAGCCTGTGGACAGCTTAAACAAAGAATCAGGATTC ATACGGAATCCACATGGACATTCTTCAATGATGCCACACAGCTCAGGTTCTATCCCTGTC CAAAACTCATTGCCACCTGCTCCGCCATCTGCATCACAGTTACAGGTTCATGCGCCACCA GTTCAAGGTTCAGTGCCACCAAATCCATCCATTATGCATACACCGAATGCTCCTATGCCT TCTCACAACACTTTGCCTTTACCCCCTATGCATCCTTCGGGAAATCCAGCTCATTCTTCC ATGCCTTTGAGATCGTTCGTCCCTCCTCTTCCTGAAGGCCCTCCACCCCTTAGGCAGCAC ACATCAAGTGCTCTACAAGCGCAACCTGCACTTCCCTCTGGACCACAGACTAGCCAGCAA CCGTCTGCTCAGGAAGACCATCACGGAGACCCTCAAAAGCGCCTTCAAGCAACATTGCAA TTGGCAGCAACCCTACTTCAGCAGATACAGCAACAATCTAAACCTGGTGGCCAGAAGTAG ATGCGAGGTTAAGGAAATTTGCAGCCTGCAAGGATCATATGGTGATATTTTCTCCTTATT ACTGAAGAGCCTGAGAGTCTGAAACTGCTGGTGGGCACCCATACCTATACCGGATGTTTT GTTAACATAGGTTCTGCTATGAATTAGCATTGCAGTTTAATTTTGAAAGCTTACTCCTAG GTGGCAACCACCTCCGTTGTCTTGTCTGTATAAGATTGCACCGTTCATCTTTTCTCTCTG TTTTTGTGTTAATCAATGCATAGACCCATGAATACCACTTCCCTTTTTGCATTCATACAT CATGCATTCGTCTCATCGATGTGTCGTCTCTC