Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0298500-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:7277255:7282211:-1 gene:Os09g0298500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os09t0298500-01);Similar to Protein binding protein. (Os09t0298500-02)
Sequence	ATGGCGGGGAGATGCGCCGGCGGCGGCGACGGCGGCGGCGAGGGCATGCTGGCGCGGCTG CGGAGGGCGGCAGCCAGGCGGATCGGGCTCTCCTGCGCCTCCTTCTTCTCCCACGCCGCC ACCTCCCCTTCCCCGCCTCCCAAGACCATCTCATGCTCAGCACTGAATGCGCCTGCAGAC AGCACTGATGAAGACCAGGAAAAGCTGGAGGAGCCCACTAGCACAAGAATGGCTGACAAG AATCTCTGTGCAATATGTCTGGAGCCCCTCAGCACCGGCAGCGTTGATATTGACAATGGT GACAGGCCAGCAATCTTCACATCACAATGCTCCCACTCCTTCCACTTCCTATGCATCGCC TCCAACATTCGGCACGGCAATGTTACATGTCCCATCTGCCGTGCACAGTGGTCTCAGCTG CCGCGTGACTTGAAGGTGCCACCATTGCTGCAGAACAACCAGTCTGACCCAATCCTCCGC ATCCTTGATGACAACATCGCGACATCTCGTTTCAACAGAAGGTCATCCATCCGTGCTGCC CGGTACAACGACGATGATCCGGTTGAGCCTTACACCTTGACCGAGCATGTGGATCCATGC CTTCGCTTCGCTCTGATCCCATCCCCAGTGGCGGCTCACCATCATGCTCTCGGACATTAC CCTTGTGGCCGTGTGATGCCACTGCAGCAGCATTGCCAGTACAGCAGCTCCTCCATGCTC TCACCGCCACAGATTGCTTCACCAAGTGGGCAGAGGCGCGCTTACCTCTCCGTCAGTCTC GCGCCACAGCCAGCCATGGACCTAGTTCTGGTTGCCAGCCCTAATGGGCCACATCTCAGG CTCCTGAAGCAGGCAATGGCGCTGGCTGTCTTCTCCATGCGCGCAATTGACCGGTTAGCC ATTGTCACAAATGCCACCACTGCAACCCGCGCCTTCCCCTTGCGCCGAATGTCATCCCAT GGAAAGCGAATGGCATTGCAGGTCATTGAACACCTCTGCTGTGTTGGTGGTACTGATCCT GTAGGGGCATTGCAGAAGGGCCTGAAGATACTAGAGGACCGGGCGCACCAGAACCCAAGC AGTTGCATTCTTCACCTGTCAGACCATCCAATCCGAAGCTGTTTCGGGGTCGACATGAAC CGTTTCAACATCCCGGTTCACCAGTTCCATGTCGGCCTCGGTTTCGGGGTGCAGAATGGC TTTGTGATGCACGAGTTTGAGGAGCTCTTAGCGCGGTTGCTTGGCGGTGTCATAAGCGAC ACCCAGCTCAGGATTGGCGAGCACGGTGGAGTGGTGAGGCTAGGTGAGCTGAGGGGTGGC GAAGAGAGGAGGATCCCGCTTGACCTGGTGTCGGACTGCGGCTTCATACTTGTTGGCTAT AGCTATCTGGAAGGTGGAAGGGAGGATCAGTTCAGGACAGGCGAAGTCGCTGTCGGTTTC GAAGAGAAAGGCGATAACCGGTACTGCGGGGTCAGGGATGCCGGTGGTCTGAGTATCGGC GGTGAGAGGAGGAGCAGCTGCTGCGCCGAGAGATGGGACTACCTTGATCCGTTCATGGCG CGGCGATGGGCGAAGCATTTCAATGTGTATAGGGCCTGA

Peptide Sequence

PEP ID	Os09t0298500-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:7277255:7282211:-1 gene:Os09g0298500 transcript:Os09t0298500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os09t0298500-01);Similar to Protein binding protein. (Os09t0298500-02)
Sequence	MAGRCAGGGDGGGEGMLARLRRAAARRIGLSCASFFSHAATSPSPPPKTISCSALNAPAD STDEDQEKLEEPTSTRMADKNLCAICLEPLSTGSVDIDNGDRPAIFTSQCSHSFHFLCIA SNIRHGNVTCPICRAQWSQLPRDLKVPPLLQNNQSDPILRILDDNIATSRFNRRSSIRAA RYNDDDPVEPYTLTEHVDPCLRFALIPSPVAAHHHALGHYPCGRVMPLQQHCQYSSSSML SPPQIASPSGQRRAYLSVSLAPQPAMDLVLVASPNGPHLRLLKQAMALAVFSMRAIDRLA IVTNATTATRAFPLRRMSSHGKRMALQVIEHLCCVGGTDPVGALQKGLKILEDRAHQNPS SCILHLSDHPIRSCFGVDMNRFNIPVHQFHVGLGFGVQNGFVMHEFEELLARLLGGVISD TQLRIGEHGGVVRLGELRGGEERRIPLDLVSDCGFILVGYSYLEGGREDQFRTGEVAVGF EEKGDNRYCGVRDAGGLSIGGERRSSCCAERWDYLDPFMARRWAKHFNVYRA

Transcript Sequence

Transcript ID	Os09t0298500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:7277255:7282211:-1 gene:Os09g0298500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os09t0298500-01);Similar to Protein binding protein. (Os09t0298500-02)
Sequence	GAAGAGGAGGAGGAAGAGCTAGCTATCCTATGGTGCTAGCTGTAGCTAGCTCCGACGACT GAGGTGAGGAGACGCAATGGCGGGGAGATGCGCCGGCGGCGGCGACGGCGGCGGCGAGGG CATGCTGGCGCGGCTGCGGAGGGCGGCAGCCAGGCGGATCGGGCTCTCCTGCGCCTCCTT CTTCTCCCACGCCGCCACCTCCCCTTCCCCGCCTCCCAAGACCATCTCATGCTCAGCACT GAATGCGCCTGCAGACAGCACTGATGAAGACCAGGAAAAGCTGGAGGAGCCCACTAGCAC AAGAATGGCTGACAAGAATCTCTGTGCAATATGTCTGGAGCCCCTCAGCACCGGCAGCGT TGATATTGACAATGGTGACAGGCCAGCAATCTTCACATCACAATGCTCCCACTCCTTCCA CTTCCTATGCATCGCCTCCAACATTCGGCACGGCAATGTTACATGTCCCATCTGCCGTGC ACAGTGGTCTCAGCTGCCGCGTGACTTGAAGGTGCCACCATTGCTGCAGAACAACCAGTC TGACCCAATCCTCCGCATCCTTGATGACAACATCGCGACATCTCGTTTCAACAGAAGGTC ATCCATCCGTGCTGCCCGGTACAACGACGATGATCCGGTTGAGCCTTACACCTTGACCGA GCATGTGGATCCATGCCTTCGCTTCGCTCTGATCCCATCCCCAGTGGCGGCTCACCATCA TGCTCTCGGACATTACCCTTGTGGCCGTGTGATGCCACTGCAGCAGCATTGCCAGTACAG CAGCTCCTCCATGCTCTCACCGCCACAGATTGCTTCACCAAGTGGGCAGAGGCGCGCTTA CCTCTCCGTCAGTCTCGCGCCACAGCCAGCCATGGACCTAGTTCTGGTTGCCAGCCCTAA TGGGCCACATCTCAGGCTCCTGAAGCAGGCAATGGCGCTGGCTGTCTTCTCCATGCGCGC AATTGACCGGTTAGCCATTGTCACAAATGCCACCACTGCAACCCGCGCCTTCCCCTTGCG CCGAATGTCATCCCATGGAAAGCGAATGGCATTGCAGGTCATTGAACACCTCTGCTGTGT TGGTGGTACTGATCCTGTAGGGGCATTGCAGAAGGGCCTGAAGATACTAGAGGACCGGGC GCACCAGAACCCAAGCAGTTGCATTCTTCACCTGTCAGACCATCCAATCCGAAGCTGTTT CGGGGTCGACATGAACCGTTTCAACATCCCGGTTCACCAGTTCCATGTCGGCCTCGGTTT CGGGGTGCAGAATGGCTTTGTGATGCACGAGTTTGAGGAGCTCTTAGCGCGGTTGCTTGG CGGTGTCATAAGCGACACCCAGCTCAGGATTGGCGAGCACGGTGGAGTGGTGAGGCTAGG TGAGCTGAGGGGTGGCGAAGAGAGGAGGATCCCGCTTGACCTGGTGTCGGACTGCGGCTT CATACTTGTTGGCTATAGCTATCTGGAAGGTGGAAGGGAGGATCAGTTCAGGACAGGCGA AGTCGCTGTCGGTTTCGAAGAGAAAGGCGATAACCGGTACTGCGGGGTCAGGGATGCCGG TGGTCTGAGTATCGGCGGTGAGAGGAGGAGCAGCTGCTGCGCCGAGAGATGGGACTACCT TGATCCGTTCATGGCGCGGCGATGGGCGAAGCATTTCAATGTGTATAGGGCCTGAGTTAA AAAGAGGGGGAGCTTGGGGCTTTGAAGTGATCAGCTCAGCAAGTCTGGTTTACCAGTTTG ACAGCATATGATTCTTGTTGGCTCTTTATTTTTTTTTTCCTCTCTTAACATTCCTGCAAG CATCTCATGATCATCAGAGGAAATGTTTGCTTTTTTGGCTTTTGTTGTGGATCAGGGATC CATTTGTAAGATGTCTGGTTTTGCATCAGATGTGTGCAATGTGCACAAGGCTTTCTGTTC TCAATCTGTATGTGTGAATCGGACTGTGAACAAAACTCAGCACAAAGAATGAAATATGGC TGCATTGGAGTGAGTTATTTT